data_IJS # _chem_comp.id IJS _chem_comp.name "(3~{R},5~{R})-3-[2-[[methyl(prop-2-ynyl)amino]methyl]-1,3-thiazol-4-yl]-5-[3-[2-nitro-4-(trifluoromethyl)phenyl]-1,2,4-oxadiazol-5-yl]pyrrolidin-3-ol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H19 F3 N6 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-08-01 _chem_comp.pdbx_modified_date 2024-08-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 508.474 _chem_comp.one_letter_code ? _chem_comp.three_letter_code IJS _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8Q14 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal IJS C15 C1 C 0 1 Y N N N N N -0.076 2.988 9.369 0.272 1.441 -0.105 C15 IJS 1 IJS C17 C2 C 0 1 Y N N N N N -1.723 1.725 9.991 2.289 0.875 0.217 C17 IJS 2 IJS C18 C3 C 0 1 Y N N N N N -2.962 1.197 10.220 3.562 0.112 0.242 C18 IJS 3 IJS C19 C4 C 0 1 Y N N N N N -3.036 -0.129 10.541 3.613 -1.142 0.848 C19 IJS 4 IJS C14 C5 C 0 1 N N R N N N 0.823 4.101 8.725 -1.182 1.470 -0.503 C14 IJS 5 IJS C10 C6 C 0 1 N N R N N N 1.322 5.982 10.227 -3.279 2.303 0.449 C10 IJS 6 IJS C01 C7 C 0 1 N N N N N N -3.413 12.500 9.359 -6.200 -5.836 0.267 C01 IJS 7 IJS C02 C8 C 0 1 N N N N N N -2.263 12.771 9.406 -6.368 -4.868 -0.376 C02 IJS 8 IJS C03 C9 C 0 1 N N N N N N -0.746 13.125 9.471 -6.579 -3.655 -1.183 C03 IJS 9 IJS C05 C10 C 0 1 N N N N N N -0.429 11.499 11.231 -4.507 -2.638 -0.449 C05 IJS 10 IJS C06 C11 C 0 1 N N N N N N -0.063 10.811 8.948 -6.359 -1.244 -1.151 C06 IJS 11 IJS C07 C12 C 0 1 Y N N N N N 0.884 9.693 9.403 -5.924 -0.083 -0.294 C07 IJS 12 IJS C09 C13 C 0 1 Y N N N N N 1.564 7.588 9.979 -4.564 1.516 0.444 C09 IJS 13 IJS C12 C14 C 0 1 N N N N N N 2.434 5.328 9.980 -2.999 2.881 -0.955 C12 IJS 14 IJS C20 C15 C 0 1 Y N N N N N -4.262 -0.731 10.797 4.800 -1.847 0.869 C20 IJS 15 IJS C21 C16 C 0 1 Y N N N N N -5.422 0.021 10.738 5.936 -1.312 0.290 C21 IJS 16 IJS C22 C17 C 0 1 N N N N N N -6.772 -0.619 11.023 7.228 -2.087 0.317 C22 IJS 17 IJS C26 C18 C 0 1 Y N N N N N -5.359 1.371 10.420 5.890 -0.068 -0.313 C26 IJS 18 IJS C27 C19 C 0 1 Y N N N N N -4.157 1.969 10.166 4.708 0.643 -0.345 C27 IJS 19 IJS C33 C20 C 0 1 N N N N N N 0.230 5.428 9.274 -2.084 1.375 0.747 C33 IJS 20 IJS C34 C21 C 0 1 Y N N N N N 2.806 8.172 10.185 -5.575 1.778 1.279 C34 IJS 21 IJS F23 F1 F 0 1 N N N N N N -6.660 -1.999 11.012 7.028 -3.305 0.975 F23 IJS 22 IJS F24 F2 F 0 1 N N N N N N -7.697 -0.209 10.060 7.653 -2.329 -0.994 F24 IJS 23 IJS F25 F3 F 0 1 N N N N N N -7.197 -0.217 12.270 8.203 -1.346 0.994 F25 IJS 24 IJS N04 N1 N 0 1 N N N N N N 0.042 11.943 9.929 -5.969 -2.504 -0.504 N04 IJS 25 IJS N08 N2 N 0 1 Y N N N N N 0.581 8.404 9.572 -4.785 0.515 -0.384 N08 IJS 26 IJS N13 N3 N 0 1 N N N N N N 2.122 4.120 8.937 -1.526 2.779 -1.115 N13 IJS 27 IJS N16 N4 N 0 1 Y N N N N N -1.384 2.846 9.329 1.112 0.455 -0.299 N16 IJS 28 IJS N28 N5 N 0 1 N N N N N N -4.132 3.397 9.824 4.660 1.972 -0.996 N28 IJS 29 IJS N31 N6 N 0 1 Y N N N N N -0.623 1.161 10.442 2.098 2.080 0.685 N31 IJS 30 IJS O11 O1 O 0 1 N N N N N N 0.953 5.769 11.505 -3.345 3.354 1.415 O11 IJS 31 IJS O29 O2 O 0 1 N N N N N N -4.666 3.771 8.827 5.686 2.490 -1.399 O29 IJS 32 IJS O30 O3 O 0 1 N N N N N N -3.589 4.160 10.512 3.594 2.546 -1.128 O30 IJS 33 IJS O32 O4 O 0 1 Y N N N N N 0.425 1.934 10.054 0.947 2.419 0.506 O32 IJS 34 IJS S35 S1 S 0 1 Y N N N N N 2.569 9.864 9.802 -6.872 0.636 0.934 S35 IJS 35 IJS H191 H1 H 0 0 N N N N N N -2.131 -0.716 10.596 2.727 -1.560 1.301 H191 IJS 36 IJS H141 H2 H 0 0 N N N N N N 0.619 4.084 7.644 -1.402 0.657 -1.195 H141 IJS 37 IJS H011 H3 H 0 0 N N N N N N -4.444 12.257 9.317 -6.049 -6.701 0.842 H011 IJS 38 IJS H032 H4 H 0 0 N N N N N N -0.400 13.426 8.471 -6.118 -3.785 -2.162 H032 IJS 39 IJS H031 H5 H 0 0 N N N N N N -0.597 13.956 10.176 -7.648 -3.481 -1.305 H031 IJS 40 IJS H053 H6 H 0 0 N N N N N N 0.159 10.628 11.557 -4.087 -1.808 0.119 H053 IJS 41 IJS H051 H7 H 0 0 N N N N N N -0.312 12.314 11.960 -4.247 -3.579 0.035 H051 IJS 42 IJS H052 H8 H 0 0 N N N N N N -1.490 11.219 11.161 -4.104 -2.626 -1.462 H052 IJS 43 IJS H061 H9 H 0 0 N N N N N N -1.097 10.436 8.922 -7.441 -1.219 -1.275 H061 IJS 44 IJS H062 H10 H 0 0 N N N N N N 0.226 11.159 7.945 -5.880 -1.174 -2.128 H062 IJS 45 IJS H122 H11 H 0 0 N N N N N N 3.174 6.013 9.540 -3.506 2.289 -1.718 H122 IJS 46 IJS H121 H12 H 0 0 N N N N N N 2.832 4.912 10.917 -3.318 3.921 -1.009 H121 IJS 47 IJS H201 H13 H 0 0 N N N N N N -4.309 -1.782 11.041 4.840 -2.819 1.339 H201 IJS 48 IJS H261 H14 H 0 0 N N N N N N -6.267 1.953 10.373 6.780 0.345 -0.764 H261 IJS 49 IJS H332 H15 H 0 0 N N N N N N 0.036 6.135 8.454 -2.426 0.350 0.889 H332 IJS 50 IJS H331 H16 H 0 0 N N N N N N -0.704 5.238 9.823 -1.546 1.722 1.629 H331 IJS 51 IJS H341 H17 H 0 0 N N N N N N 3.716 7.690 10.509 -5.595 2.554 2.029 H341 IJS 52 IJS H2 H19 H 0 1 N N N N N N 2.605 4.280 8.076 -1.265 2.803 -2.089 H2 IJS 53 IJS H111 H21 H 0 0 N N N N N N 0.149 6.241 11.686 -4.065 3.982 1.266 H111 IJS 54 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal IJS C02 C01 TRIP N N 1 IJS C03 C02 SING N N 2 IJS N04 C03 SING N N 3 IJS C05 N04 SING N N 4 IJS C06 N04 SING N N 5 IJS C07 C06 SING N N 6 IJS N08 C07 DOUB Y N 7 IJS C09 N08 SING Y N 8 IJS O11 C10 SING N N 9 IJS C12 C10 SING N N 10 IJS N13 C12 SING N N 11 IJS C14 N13 SING N N 12 IJS N16 C15 DOUB Y N 13 IJS C17 N16 SING Y N 14 IJS C19 C18 DOUB Y N 15 IJS C20 C19 SING Y N 16 IJS C21 C20 DOUB Y N 17 IJS F23 C22 SING N N 18 IJS F24 C22 SING N N 19 IJS F25 C22 SING N N 20 IJS C22 C21 SING N N 21 IJS C26 C21 SING Y N 22 IJS C27 C26 DOUB Y N 23 IJS N28 C27 SING N N 24 IJS O29 N28 DOUB N N 25 IJS O30 N28 DOUB N N 26 IJS C18 C17 SING N N 27 IJS N31 C17 DOUB Y N 28 IJS O32 N31 SING Y N 29 IJS C15 C14 SING N N 30 IJS C33 C14 SING N N 31 IJS C10 C09 SING N N 32 IJS C34 C09 DOUB Y N 33 IJS S35 C34 SING Y N 34 IJS C07 S35 SING Y N 35 IJS C10 C33 SING N N 36 IJS C15 O32 SING Y N 37 IJS C18 C27 SING Y N 38 IJS C19 H191 SING N N 39 IJS C14 H141 SING N N 40 IJS C01 H011 SING N N 41 IJS C03 H032 SING N N 42 IJS C03 H031 SING N N 43 IJS C05 H053 SING N N 44 IJS C05 H051 SING N N 45 IJS C05 H052 SING N N 46 IJS C06 H061 SING N N 47 IJS C06 H062 SING N N 48 IJS C12 H122 SING N N 49 IJS C12 H121 SING N N 50 IJS C20 H201 SING N N 51 IJS C26 H261 SING N N 52 IJS C33 H332 SING N N 53 IJS C33 H331 SING N N 54 IJS C34 H341 SING N N 55 IJS N13 H2 SING N N 56 IJS O11 H111 SING N N 57 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor IJS InChI InChI 1.06 "InChI=1S/C21H19F3N6O4S/c1-3-6-29(2)9-17-26-16(10-35-17)20(31)8-14(25-11-20)19-27-18(28-34-19)13-5-4-12(21(22,23)24)7-15(13)30(32)33/h1,4-5,7,10,14,25,31H,6,8-9,11H2,2H3/t14-,20-/m1/s1" IJS InChIKey InChI 1.06 COBDFCAWUNRFOD-JLTOFOAXSA-N IJS SMILES_CANONICAL CACTVS 3.385 "CN(CC#C)Cc1scc(n1)[C@]2(O)CN[C@H](C2)c3onc(n3)c4ccc(cc4[N](=O)=O)C(F)(F)F" IJS SMILES CACTVS 3.385 "CN(CC#C)Cc1scc(n1)[C]2(O)CN[CH](C2)c3onc(n3)c4ccc(cc4[N](=O)=O)C(F)(F)F" IJS SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(CC#C)Cc1nc(cs1)[C@]2(C[C@@H](NC2)c3nc(no3)c4ccc(cc4N(=O)=O)C(F)(F)F)O" IJS SMILES "OpenEye OEToolkits" 2.0.7 "CN(CC#C)Cc1nc(cs1)C2(CC(NC2)c3nc(no3)c4ccc(cc4N(=O)=O)C(F)(F)F)O" # _pdbx_chem_comp_identifier.comp_id IJS _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{R},5~{R})-3-[2-[[methyl(prop-2-ynyl)amino]methyl]-1,3-thiazol-4-yl]-5-[3-[2-nitro-4-(trifluoromethyl)phenyl]-1,2,4-oxadiazol-5-yl]pyrrolidin-3-ol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site IJS "Create component" 2023-08-01 PDBE IJS "Initial release" 2024-08-07 RCSB #