data_IKA # _chem_comp.id IKA _chem_comp.name "(3~{R},5~{R})-3-[2-[[methyl(prop-2-ynyl)amino]methyl]-1,3-thiazol-4-yl]-5-[3-[4-(trifluoromethyl)phenyl]-1,2,4-oxadiazol-5-yl]pyrrolidin-3-ol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H20 F3 N5 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-08-01 _chem_comp.pdbx_modified_date 2024-08-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 463.476 _chem_comp.one_letter_code ? _chem_comp.three_letter_code IKA _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8Q0V _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal IKA C01 C1 C 0 1 N N N N N N -2.976 12.418 9.378 -5.427 -5.851 0.889 C01 IKA 1 IKA C02 C2 C 0 1 N N N N N N -1.823 12.698 9.395 -5.663 -4.964 0.157 C02 IKA 2 IKA C03 C3 C 0 1 N N N N N N -0.348 13.076 9.464 -5.960 -3.852 -0.761 C03 IKA 3 IKA C05 C4 C 0 1 N N N N N N 0.159 11.283 10.973 -3.930 -2.659 -0.195 C05 IKA 4 IKA C06 C5 C 0 1 N N N N N N 0.272 10.887 8.574 -5.872 -1.442 -0.978 C06 IKA 5 IKA C07 C6 C 0 1 Y N N N N N 1.101 9.632 8.895 -5.481 -0.179 -0.255 C07 IKA 6 IKA C09 C7 C 0 1 Y N N N N N 1.475 7.470 9.513 -4.194 1.556 0.278 C09 IKA 7 IKA C10 C8 C 0 1 N N R N N N 1.025 6.113 9.972 -2.954 2.405 0.165 C10 IKA 8 IKA C12 C9 C 0 1 N N N N N N 2.275 5.145 10.094 -2.740 2.850 -1.298 C12 IKA 9 IKA C14 C10 C 0 1 N N R N N N 0.724 4.229 8.641 -0.837 1.590 -0.760 C14 IKA 10 IKA C15 C11 C 0 1 Y N N N N N -0.028 3.082 9.256 0.625 1.676 -0.407 C15 IKA 11 IKA C17 C12 C 0 1 Y N N N N N -1.467 1.692 10.042 2.678 1.250 -0.094 C17 IKA 12 IKA C18 C13 C 0 1 Y N N N N N -2.706 1.122 10.404 3.990 0.560 -0.031 C18 IKA 13 IKA C19 C14 C 0 1 Y N N N N N -2.865 -0.262 10.344 4.104 -0.765 -0.448 C19 IKA 14 IKA C20 C15 C 0 1 Y N N N N N -4.102 -0.834 10.663 5.327 -1.402 -0.387 C20 IKA 15 IKA C21 C16 C 0 1 Y N N N N N -5.171 0.002 11.027 6.438 -0.729 0.086 C21 IKA 16 IKA C22 C17 C 0 1 N N N N N N -6.537 -0.562 11.384 7.771 -1.430 0.150 C22 IKA 17 IKA C26 C18 C 0 1 Y N N N N N -5.005 1.381 11.068 6.331 0.586 0.502 C26 IKA 18 IKA C27 C19 C 0 1 Y N N N N N -3.782 1.950 10.748 5.114 1.235 0.440 C27 IKA 19 IKA C30 C20 C 0 1 N N N N N N 0.070 5.361 9.040 -1.702 1.576 0.519 C30 IKA 20 IKA C31 C21 C 0 1 Y N N N N N 2.805 7.843 9.331 -5.197 1.848 1.111 C31 IKA 21 IKA F23 F1 F 0 1 N N N N N N -6.487 -1.909 11.515 8.457 -1.237 -1.054 F23 IKA 22 IKA F24 F2 F 0 1 N N N N N N -6.950 -0.007 12.546 8.524 -0.904 1.205 F24 IKA 23 IKA F25 F3 F 0 1 N N N N N N -7.426 -0.215 10.405 7.568 -2.798 0.358 F25 IKA 24 IKA N04 N1 N 0 1 N N N N N N 0.504 11.885 9.670 -5.398 -2.608 -0.219 N04 IKA 25 IKA N08 N2 N 0 1 Y N N N N N 0.614 8.444 9.289 -4.379 0.466 -0.439 N08 IKA 26 IKA N13 N3 N 0 1 N N N N N N 2.261 4.432 8.994 -1.268 2.810 -1.490 N13 IKA 27 IKA N16 N4 N 0 1 Y N N N N N -1.315 2.890 9.496 1.512 0.720 -0.526 N16 IKA 28 IKA N28 N5 N 0 1 Y N N N N N -0.294 1.082 10.131 2.434 2.486 0.256 N28 IKA 29 IKA O11 O1 O 0 1 N N N N N N 0.364 6.250 11.206 -3.054 3.544 1.022 O11 IKA 30 IKA O29 O2 O 0 1 Y N N N N N 0.623 1.970 9.643 1.262 2.745 0.081 O29 IKA 31 IKA S32 S1 S 0 1 Y N N N N N 2.810 9.529 8.829 -6.437 0.611 0.921 S32 IKA 32 IKA H011 H1 H 0 0 N N N N N N -4.006 12.168 9.363 -5.215 -6.644 1.544 H011 IKA 33 IKA H032 H2 H 0 0 N N N N N N -0.059 13.564 8.522 -5.516 -4.057 -1.735 H032 IKA 34 IKA H031 H3 H 0 0 N N N N N N -0.196 13.774 10.300 -7.039 -3.748 -0.868 H031 IKA 35 IKA H053 H4 H 0 0 N N N N N N 0.784 10.394 11.144 -3.543 -1.755 0.275 H053 IKA 36 IKA H051 H5 H 0 0 N N N N N N 0.337 12.016 11.774 -3.607 -3.531 0.374 H051 IKA 37 IKA H052 H6 H 0 0 N N N N N N -0.902 10.991 10.973 -3.552 -2.729 -1.215 H052 IKA 38 IKA H061 H7 H 0 0 N N N N N N -0.796 10.627 8.525 -6.957 -1.486 -1.072 H061 IKA 39 IKA H062 H8 H 0 0 N N N N N N 0.591 11.310 7.610 -5.421 -1.448 -1.970 H062 IKA 40 IKA H121 H9 H 0 0 N N N N N N 3.207 5.725 10.167 -3.232 2.158 -1.982 H121 IKA 41 IKA H122 H10 H 0 0 N N N N N N 2.177 4.496 10.977 -3.117 3.862 -1.447 H122 IKA 42 IKA H141 H11 H 0 0 N N N N N N 0.658 4.128 7.548 -1.031 0.700 -1.359 H141 IKA 43 IKA H191 H12 H 0 0 N N N N N N -2.037 -0.890 10.052 3.237 -1.292 -0.818 H191 IKA 44 IKA H201 H13 H 0 0 N N N N N N -4.233 -1.905 10.630 5.416 -2.429 -0.710 H201 IKA 45 IKA H261 H14 H 0 0 N N N N N N -5.834 2.013 11.351 7.202 1.108 0.871 H261 IKA 46 IKA H271 H15 H 0 0 N N N N N N -3.660 3.023 10.764 5.032 2.263 0.761 H271 IKA 47 IKA H302 H16 H 0 0 N N N N N N -0.178 5.984 8.168 -1.163 2.039 1.345 H302 IKA 48 IKA H301 H17 H 0 0 N N N N N N -0.854 5.097 9.576 -1.985 0.555 0.774 H301 IKA 49 IKA H311 H18 H 0 0 N N N N N N 3.672 7.214 9.472 -5.240 2.694 1.781 H311 IKA 50 IKA H2 H20 H 0 1 N N N N N N 2.728 4.919 8.256 -1.032 2.747 -2.469 H2 IKA 51 IKA H111 H22 H 0 0 N N N N N N -0.379 6.834 11.105 -3.811 4.115 0.831 H111 IKA 52 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal IKA C02 C01 TRIP N N 1 IKA C03 C02 SING N N 2 IKA N04 C03 SING N N 3 IKA C05 N04 SING N N 4 IKA C06 N04 SING N N 5 IKA C07 C06 SING N N 6 IKA N08 C07 DOUB Y N 7 IKA C09 N08 SING Y N 8 IKA O11 C10 SING N N 9 IKA C12 C10 SING N N 10 IKA N13 C12 SING N N 11 IKA C14 N13 SING N N 12 IKA N16 C15 DOUB Y N 13 IKA C17 N16 SING Y N 14 IKA C19 C18 DOUB Y N 15 IKA C20 C19 SING Y N 16 IKA C21 C20 DOUB Y N 17 IKA F23 C22 SING N N 18 IKA F24 C22 SING N N 19 IKA F25 C22 SING N N 20 IKA C22 C21 SING N N 21 IKA C26 C21 SING Y N 22 IKA C27 C26 DOUB Y N 23 IKA C18 C17 SING N N 24 IKA N28 C17 DOUB Y N 25 IKA O29 N28 SING Y N 26 IKA C15 C14 SING N N 27 IKA C30 C14 SING N N 28 IKA C10 C09 SING N N 29 IKA C31 C09 DOUB Y N 30 IKA S32 C31 SING Y N 31 IKA C07 S32 SING Y N 32 IKA C10 C30 SING N N 33 IKA C15 O29 SING Y N 34 IKA C18 C27 SING Y N 35 IKA C01 H011 SING N N 36 IKA C03 H032 SING N N 37 IKA C03 H031 SING N N 38 IKA C05 H053 SING N N 39 IKA C05 H051 SING N N 40 IKA C05 H052 SING N N 41 IKA C06 H061 SING N N 42 IKA C06 H062 SING N N 43 IKA C12 H121 SING N N 44 IKA C12 H122 SING N N 45 IKA C14 H141 SING N N 46 IKA C19 H191 SING N N 47 IKA C20 H201 SING N N 48 IKA C26 H261 SING N N 49 IKA C27 H271 SING N N 50 IKA C30 H302 SING N N 51 IKA C30 H301 SING N N 52 IKA C31 H311 SING N N 53 IKA N13 H2 SING N N 54 IKA O11 H111 SING N N 55 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor IKA InChI InChI 1.06 "InChI=1S/C21H20F3N5O2S/c1-3-8-29(2)10-17-26-16(11-32-17)20(30)9-15(25-12-20)19-27-18(28-31-19)13-4-6-14(7-5-13)21(22,23)24/h1,4-7,11,15,25,30H,8-10,12H2,2H3/t15-,20-/m1/s1" IKA InChIKey InChI 1.06 JYTZSLQNLLUMMJ-FOIQADDNSA-N IKA SMILES_CANONICAL CACTVS 3.385 "CN(CC#C)Cc1scc(n1)[C@]2(O)CN[C@H](C2)c3onc(n3)c4ccc(cc4)C(F)(F)F" IKA SMILES CACTVS 3.385 "CN(CC#C)Cc1scc(n1)[C]2(O)CN[CH](C2)c3onc(n3)c4ccc(cc4)C(F)(F)F" IKA SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(CC#C)Cc1nc(cs1)[C@]2(C[C@@H](NC2)c3nc(no3)c4ccc(cc4)C(F)(F)F)O" IKA SMILES "OpenEye OEToolkits" 2.0.7 "CN(CC#C)Cc1nc(cs1)C2(CC(NC2)c3nc(no3)c4ccc(cc4)C(F)(F)F)O" # _pdbx_chem_comp_identifier.comp_id IKA _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{R},5~{R})-3-[2-[[methyl(prop-2-ynyl)amino]methyl]-1,3-thiazol-4-yl]-5-[3-[4-(trifluoromethyl)phenyl]-1,2,4-oxadiazol-5-yl]pyrrolidin-3-ol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site IKA "Create component" 2023-08-01 PDBE IKA "Initial release" 2024-08-07 RCSB #