data_IKG # _chem_comp.id IKG _chem_comp.name "~{N}-[(1~{R})-2-[4-(azetidin-1-ylcarbonyl)phenyl]-1-cyano-ethyl]-3-(3,4-dimethoxyphenyl)-1,2,4-oxadiazole-5-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H23 N5 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "ACV thioaldehyde" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-08-01 _chem_comp.pdbx_modified_date 2023-11-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 461.470 _chem_comp.one_letter_code ? _chem_comp.three_letter_code IKG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8Q0U _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal IKG C2 C1 C 0 1 Y N N N N N -5.574 15.407 -12.303 -6.485 0.793 0.679 C2 IKG 1 IKG C4 C2 C 0 1 Y N N N N N -7.415 16.489 -13.378 -4.566 -0.516 1.270 C4 IKG 2 IKG C3 C3 C 0 1 Y N N N N N -6.883 15.398 -12.731 -5.827 -0.043 1.569 C3 IKG 3 IKG C9 C4 C 0 1 Y N N N N N -7.316 18.749 -14.308 -2.595 -0.664 -0.248 C9 IKG 4 IKG C8 C5 C 0 1 N N N N N N -2.541 17.443 -12.574 -5.843 2.296 -2.607 C8 IKG 5 IKG C13 C6 C 0 1 N N N N N N -7.079 23.170 -18.920 3.920 -2.915 -0.795 C13 IKG 6 IKG C15 C7 C 0 1 Y N N N N N -5.966 24.965 -20.282 5.040 -1.329 0.783 C15 IKG 7 IKG C14 C8 C 0 1 Y N N N N N -7.112 24.443 -19.706 4.231 -1.518 -0.324 C14 IKG 8 IKG C7 C9 C 0 1 Y N N N N N -4.773 16.542 -12.586 -5.877 1.153 -0.521 C7 IKG 9 IKG C20 C10 C 0 1 N N N N N N -7.342 28.111 -21.988 5.096 2.420 1.013 C20 IKG 10 IKG C23 C11 C 0 1 N N N N N N -4.875 28.999 -21.858 3.973 3.688 -0.978 C23 IKG 11 IKG C24 C12 C 0 1 N N N N N N -5.476 24.094 -17.437 2.415 -4.822 -0.468 C24 IKG 12 IKG C21 C13 C 0 1 N N N N N N -6.384 30.425 -22.592 4.871 4.941 0.361 C21 IKG 13 IKG C6 C14 C 0 1 Y N N N N N -5.323 17.633 -13.263 -4.614 0.680 -0.824 C6 IKG 14 IKG C10 C15 C 0 1 Y N N N N N -7.763 20.488 -15.441 -0.727 -1.669 -0.149 C10 IKG 15 IKG C12 C16 C 0 1 N N R N N N -6.765 23.444 -17.472 2.652 -3.417 -0.100 C12 IKG 16 IKG C11 C17 C 0 1 N N N N N N -7.882 21.629 -16.321 0.429 -2.493 0.277 C11 IKG 17 IKG C5 C18 C 0 1 Y N N N N N -6.648 17.601 -13.679 -3.951 -0.155 0.073 C5 IKG 18 IKG C1 C19 C 0 1 N N N N N N -5.850 13.622 -10.763 -8.294 0.844 2.222 C1 IKG 19 IKG O1 O1 O 0 1 N N N N N N -4.999 14.360 -11.632 -7.728 1.257 0.976 O1 IKG 20 IKG O2 O2 O 0 1 N N N N N N -3.483 16.476 -12.114 -6.526 1.968 -1.395 O2 IKG 21 IKG N1 N1 N 0 1 Y N N N N N -8.545 19.019 -13.965 -1.905 -0.405 -1.331 N1 IKG 22 IKG O3 O3 O 0 1 Y N N N N N -8.872 20.165 -14.733 -0.834 -0.972 -1.291 O3 IKG 23 IKG N2 N2 N 0 1 Y N N N N N -6.763 19.638 -15.215 -1.842 -1.474 0.524 N2 IKG 24 IKG O4 O4 O 0 1 N N N N N N -8.995 21.973 -16.702 0.402 -3.071 1.345 O4 IKG 25 IKG N3 N3 N 0 1 N N N N N N -6.763 22.228 -16.728 1.510 -2.602 -0.521 N3 IKG 26 IKG C16 C20 C 0 1 Y N N N N N -6.008 26.156 -20.989 5.325 -0.052 1.222 C16 IKG 27 IKG C17 C21 C 0 1 Y N N N N N -7.203 26.843 -21.171 4.795 1.049 0.548 C17 IKG 28 IKG C18 C22 C 0 1 Y N N N N N -8.346 26.319 -20.583 3.981 0.851 -0.568 C18 IKG 29 IKG C19 C23 C 0 1 Y N N N N N -8.292 25.140 -19.859 3.708 -0.431 -1.000 C19 IKG 30 IKG O5 O5 O 0 1 N N N N N N -8.405 28.325 -22.595 5.683 2.590 2.064 O5 IKG 31 IKG N4 N4 N 0 1 N N N N N N -6.319 29.041 -22.108 4.719 3.481 0.273 N4 IKG 32 IKG C22 C24 C 0 1 N N N N N N -4.901 30.510 -22.173 4.763 4.990 -1.171 C22 IKG 33 IKG N5 N5 N 0 1 N N N N N N -4.452 24.621 -17.397 2.231 -5.907 -0.751 N5 IKG 34 IKG H1 H1 H 0 1 N N N N N N -8.458 16.478 -13.658 -4.055 -1.166 1.965 H1 IKG 35 IKG H2 H2 H 0 1 N N N N N N -7.497 14.527 -12.557 -6.303 -0.323 2.497 H2 IKG 36 IKG H3 H3 H 0 1 N N N N N N -1.563 17.255 -12.107 -5.629 1.382 -3.162 H3 IKG 37 IKG H4 H4 H 0 1 N N N N N N -2.445 17.370 -13.667 -6.470 2.950 -3.212 H4 IKG 38 IKG H5 H5 H 0 1 N N N N N N -2.889 18.451 -12.303 -4.908 2.804 -2.371 H5 IKG 39 IKG H6 H6 H 0 1 N N N N N N -8.060 22.678 -18.989 3.765 -2.909 -1.874 H6 IKG 40 IKG H7 H7 H 0 1 N N N N N N -6.306 22.508 -19.338 4.753 -3.575 -0.551 H7 IKG 41 IKG H8 H8 H 0 1 N N N N N N -5.029 24.438 -20.179 5.445 -2.182 1.307 H8 IKG 42 IKG H9 H9 H 0 1 N N N N N N -4.297 28.385 -22.564 4.183 2.936 -1.738 H9 IKG 43 IKG H10 H10 H 0 1 N N N N N N -4.587 28.742 -20.828 2.905 3.847 -0.825 H10 IKG 44 IKG H11 H11 H 0 1 N N N N N N -7.065 31.083 -22.033 4.043 5.433 0.870 H11 IKG 45 IKG H12 H12 H 0 1 N N N N N N -6.571 30.534 -23.670 5.844 5.255 0.737 H12 IKG 46 IKG H13 H13 H 0 1 N N N N N N -4.716 18.504 -13.464 -4.141 0.958 -1.755 H13 IKG 47 IKG H14 H14 H 0 1 N N N N N N -7.530 24.124 -17.069 2.775 -3.340 0.980 H14 IKG 48 IKG H15 H15 H 0 1 N N N N N N -5.276 12.814 -10.286 -7.654 1.175 3.039 H15 IKG 49 IKG H16 H16 H 0 1 N N N N N N -6.253 14.292 -9.989 -9.285 1.284 2.334 H16 IKG 50 IKG H17 H17 H 0 1 N N N N N N -6.679 13.190 -11.342 -8.375 -0.243 2.241 H17 IKG 51 IKG H18 H18 H 0 1 N N N N N N -5.885 21.807 -16.502 1.531 -2.141 -1.374 H18 IKG 52 IKG H19 H19 H 0 1 N N N N N N -5.096 26.558 -21.406 5.956 0.094 2.086 H19 IKG 53 IKG H20 H20 H 0 1 N N N N N N -9.288 26.837 -20.691 3.568 1.699 -1.095 H20 IKG 54 IKG H21 H21 H 0 1 N N N N N N -9.194 24.758 -19.404 3.078 -0.585 -1.864 H21 IKG 55 IKG H22 H22 H 0 1 N N N N N N -4.224 30.806 -22.988 5.713 4.863 -1.690 H22 IKG 56 IKG H23 H23 H 0 1 N N N N N N -4.722 31.150 -21.297 4.170 5.822 -1.551 H23 IKG 57 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal IKG O5 C20 DOUB N N 1 IKG C21 C22 SING N N 2 IKG C21 N4 SING N N 3 IKG C22 C23 SING N N 4 IKG N4 C20 SING N N 5 IKG N4 C23 SING N N 6 IKG C20 C17 SING N N 7 IKG C17 C16 DOUB Y N 8 IKG C17 C18 SING Y N 9 IKG C16 C15 SING Y N 10 IKG C18 C19 DOUB Y N 11 IKG C15 C14 DOUB Y N 12 IKG C19 C14 SING Y N 13 IKG C14 C13 SING N N 14 IKG C13 C12 SING N N 15 IKG C12 C24 SING N N 16 IKG C12 N3 SING N N 17 IKG C24 N5 TRIP N N 18 IKG N3 C11 SING N N 19 IKG O4 C11 DOUB N N 20 IKG C11 C10 SING N N 21 IKG C10 N2 DOUB Y N 22 IKG C10 O3 SING Y N 23 IKG N2 C9 SING Y N 24 IKG O3 N1 SING Y N 25 IKG C9 N1 DOUB Y N 26 IKG C9 C5 SING N N 27 IKG C5 C4 DOUB Y N 28 IKG C5 C6 SING Y N 29 IKG C4 C3 SING Y N 30 IKG C6 C7 DOUB Y N 31 IKG C3 C2 DOUB Y N 32 IKG C7 C2 SING Y N 33 IKG C7 O2 SING N N 34 IKG C8 O2 SING N N 35 IKG C2 O1 SING N N 36 IKG O1 C1 SING N N 37 IKG C4 H1 SING N N 38 IKG C3 H2 SING N N 39 IKG C8 H3 SING N N 40 IKG C8 H4 SING N N 41 IKG C8 H5 SING N N 42 IKG C13 H6 SING N N 43 IKG C13 H7 SING N N 44 IKG C15 H8 SING N N 45 IKG C23 H9 SING N N 46 IKG C23 H10 SING N N 47 IKG C21 H11 SING N N 48 IKG C21 H12 SING N N 49 IKG C6 H13 SING N N 50 IKG C12 H14 SING N N 51 IKG C1 H15 SING N N 52 IKG C1 H16 SING N N 53 IKG C1 H17 SING N N 54 IKG N3 H18 SING N N 55 IKG C16 H19 SING N N 56 IKG C18 H20 SING N N 57 IKG C19 H21 SING N N 58 IKG C22 H22 SING N N 59 IKG C22 H23 SING N N 60 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor IKG InChI InChI 1.06 "InChI=1S/C24H23N5O5/c1-32-19-9-8-17(13-20(19)33-2)21-27-23(34-28-21)22(30)26-18(14-25)12-15-4-6-16(7-5-15)24(31)29-10-3-11-29/h4-9,13,18H,3,10-12H2,1-2H3,(H,26,30)/t18-/m1/s1" IKG InChIKey InChI 1.06 SMNJIXFCHIEXRX-GOSISDBHSA-N IKG SMILES_CANONICAL CACTVS 3.385 "COc1ccc(cc1OC)c2noc(n2)C(=O)N[C@H](Cc3ccc(cc3)C(=O)N4CCC4)C#N" IKG SMILES CACTVS 3.385 "COc1ccc(cc1OC)c2noc(n2)C(=O)N[CH](Cc3ccc(cc3)C(=O)N4CCC4)C#N" IKG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccc(cc1OC)c2nc(on2)C(=O)N[C@H](Cc3ccc(cc3)C(=O)N4CCC4)C#N" IKG SMILES "OpenEye OEToolkits" 2.0.7 "COc1ccc(cc1OC)c2nc(on2)C(=O)NC(Cc3ccc(cc3)C(=O)N4CCC4)C#N" # _pdbx_chem_comp_identifier.comp_id IKG _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[(1~{R})-2-[4-(azetidin-1-ylcarbonyl)phenyl]-1-cyano-ethyl]-3-(3,4-dimethoxyphenyl)-1,2,4-oxadiazole-5-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site IKG "Create component" 2023-08-01 PDBE IKG "Initial release" 2023-11-22 RCSB #