data_IKJ # _chem_comp.id IKJ _chem_comp.name "(2~{S})-2-azanyl-3-[4-(1-boranyl-1$l^{5}-phospholan-1-yl)phenyl]propanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H21 B N O2 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms P3F _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-07-07 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 265.096 _chem_comp.one_letter_code ? _chem_comp.three_letter_code IKJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7YEU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal IKJ C12 C12 C 0 1 N N N N N N 46.789 7.962 -5.864 4.330 1.205 -0.540 C12 IKJ 1 IKJ C13 C13 C 0 1 N N N N N N 47.702 9.186 -5.657 5.294 0.160 -1.098 C13 IKJ 2 IKJ C14 C14 C 0 1 N N N N N N 47.736 9.901 -7.021 4.912 -1.235 -0.592 C14 IKJ 3 IKJ C15 C15 C 0 1 N N N N N N 46.668 9.238 -7.911 3.384 -1.190 -0.380 C15 IKJ 4 IKJ N N N 0 1 N N N Y Y N 41.088 9.757 -2.583 -3.357 -1.479 0.768 N IKJ 5 IKJ CA CA C 0 1 N N S Y N N 41.027 11.069 -3.213 -3.684 -0.102 0.372 CA IKJ 6 IKJ C C C 0 1 N N N Y N Y 39.842 11.843 -2.647 -5.152 -0.007 0.048 C IKJ 7 IKJ O O O 0 1 N N N Y N Y 38.759 11.289 -2.500 -5.778 -1.006 -0.218 O IKJ 8 IKJ C01 C01 C 0 1 Y N N N N N 43.278 8.118 -6.100 0.707 -0.814 -0.308 C01 IKJ 9 IKJ C02 C02 C 0 1 Y N N N N N 42.044 8.809 -5.530 -0.636 -0.837 -0.636 C02 IKJ 10 IKJ C03 C03 C 0 1 Y N N N N N 42.009 10.321 -5.329 -1.399 0.308 -0.502 C03 IKJ 11 IKJ C04 C04 C 0 1 Y N N N N N 43.223 11.163 -5.675 -0.821 1.474 -0.038 C04 IKJ 12 IKJ C05 C05 C 0 1 Y N N N N N 44.457 10.454 -6.238 0.522 1.497 0.290 C05 IKJ 13 IKJ C06 C06 C 0 1 Y N N N N N 44.502 8.936 -6.474 1.285 0.351 0.161 C06 IKJ 14 IKJ C07 C07 C 0 1 N N N N N N 40.756 10.956 -4.731 -2.863 0.283 -0.860 C07 IKJ 15 IKJ P11 P11 P 0 1 N N N N N N 45.802 8.247 -7.042 3.100 0.382 0.605 P11 IKJ 16 IKJ B16 B16 B 0 1 N N N N N N 45.282 6.775 -8.083 3.700 -0.473 2.168 B16 IKJ 17 IKJ H9 H1 H 0 1 N N N N N N 46.217 7.770 -4.944 4.893 1.961 0.010 H1 IKJ 18 IKJ H10 H2 H 0 1 N N N N N N 47.403 7.082 -6.104 3.797 1.682 -1.365 H2 IKJ 19 IKJ H3 H3 H 0 1 N N N N N N 48.713 8.868 -5.363 5.253 0.175 -2.189 H3 IKJ 20 IKJ H4 H4 H 0 1 N N N N N N 47.288 9.850 -4.884 6.310 0.398 -0.775 H4 IKJ 21 IKJ H5 H5 H 0 1 N N N N N N 48.730 9.791 -7.479 5.167 -1.985 -1.336 H5 IKJ 22 IKJ H6 H6 H 0 1 N N N N N N 47.508 10.969 -6.892 5.416 -1.443 0.349 H6 IKJ 23 IKJ H7 H7 H 0 1 N N N N N N 47.160 8.681 -8.722 2.871 -1.132 -1.336 H7 IKJ 24 IKJ H8 H8 H 0 1 N N N N N N 46.017 10.013 -8.342 3.054 -2.055 0.187 H8 IKJ 25 IKJ H2 H9 H 0 1 N Y N Y Y N 41.264 9.864 -1.604 -3.566 -2.128 0.024 H9 IKJ 26 IKJ H H10 H 0 1 N N N Y Y N 40.217 9.283 -2.715 -2.392 -1.554 1.052 H10 IKJ 27 IKJ HA H12 H 0 1 N N N Y N N 41.958 11.630 -3.044 -3.448 0.577 1.192 H12 IKJ 28 IKJ H14 H14 H 0 1 N N N N N N 43.282 7.047 -6.238 1.304 -1.708 -0.413 H14 IKJ 29 IKJ H15 H15 H 0 1 N N N N N N 41.180 8.218 -5.264 -1.087 -1.748 -0.998 H15 IKJ 30 IKJ H16 H16 H 0 1 N N N N N N 43.216 12.233 -5.528 -1.417 2.368 0.067 H16 IKJ 31 IKJ H17 H17 H 0 1 N N N N N N 45.330 11.043 -6.479 0.974 2.409 0.652 H17 IKJ 32 IKJ H18 H18 H 0 1 N N N N N N 40.586 11.952 -5.165 -3.031 -0.448 -1.651 H18 IKJ 33 IKJ H19 H19 H 0 1 N N N N N N 39.878 10.320 -4.917 -3.169 1.270 -1.206 H19 IKJ 34 IKJ H20 H20 H 0 1 N N N N N N 45.705 5.681 -7.829 3.731 0.114 3.180 H20 IKJ 35 IKJ H21 H21 H 0 1 N N N N N N 44.526 6.927 -9.002 4.042 -1.591 2.129 H21 IKJ 36 IKJ OXT O1 O 0 1 N Y N Y N Y 40.066 13.118 -2.320 -5.765 1.187 0.054 O1 IKJ 37 IKJ H11 H11 H 0 1 N N N N N N ? ? ? 2.918 1.640 1.342 H11 IKJ 38 IKJ HXT H13 H 0 1 N Y N Y N Y 39.270 13.500 -1.969 -6.708 1.197 -0.161 H13 IKJ 39 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal IKJ B16 P11 SING N N 1 IKJ C15 P11 SING N N 2 IKJ C15 C14 SING N N 3 IKJ P11 C06 SING N N 4 IKJ P11 C12 SING N N 5 IKJ C14 C13 SING N N 6 IKJ C06 C05 DOUB Y N 7 IKJ C06 C01 SING Y N 8 IKJ C05 C04 SING Y N 9 IKJ C01 C02 DOUB Y N 10 IKJ C12 C13 SING N N 11 IKJ C04 C03 DOUB Y N 12 IKJ C02 C03 SING Y N 13 IKJ C03 C07 SING N N 14 IKJ C07 CA SING N N 15 IKJ CA C SING N N 16 IKJ CA N SING N N 17 IKJ C O DOUB N N 18 IKJ C12 H9 SING N N 19 IKJ C12 H10 SING N N 20 IKJ C13 H3 SING N N 21 IKJ C13 H4 SING N N 22 IKJ C14 H5 SING N N 23 IKJ C14 H6 SING N N 24 IKJ C15 H7 SING N N 25 IKJ C15 H8 SING N N 26 IKJ N H2 SING N N 27 IKJ N H SING N N 28 IKJ CA HA SING N N 29 IKJ C01 H14 SING N N 30 IKJ C02 H15 SING N N 31 IKJ C04 H16 SING N N 32 IKJ C05 H17 SING N N 33 IKJ C07 H18 SING N N 34 IKJ C07 H19 SING N N 35 IKJ B16 H20 SING N N 36 IKJ B16 H21 SING N N 37 IKJ C OXT SING N N 38 IKJ P11 H11 SING N N 39 IKJ OXT HXT SING N N 40 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor IKJ InChI InChI 1.06 "InChI=1S/C13H21BNO2P/c14-18(7-1-2-8-18)11-5-3-10(4-6-11)9-12(15)13(16)17/h3-6,12,18H,1-2,7-9,14-15H2,(H,16,17)/t12-/m0/s1" IKJ InChIKey InChI 1.06 HHYGRNJKTQQZGG-LBPRGKRZSA-N IKJ SMILES_CANONICAL CACTVS 3.385 "B[PH]1(CCCC1)c2ccc(C[C@H](N)C(O)=O)cc2" IKJ SMILES CACTVS 3.385 "B[PH]1(CCCC1)c2ccc(C[CH](N)C(O)=O)cc2" IKJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "BP1(CCCC1)c2ccc(cc2)C[C@@H](C(=O)O)N" IKJ SMILES "OpenEye OEToolkits" 2.0.7 "BP1(CCCC1)c2ccc(cc2)CC(C(=O)O)N" # _pdbx_chem_comp_identifier.comp_id IKJ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-azanyl-3-[4-(1-boranyl-1$l^{5}-phospholan-1-yl)phenyl]propanoic acid" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id IKJ _pdbx_chem_comp_synonyms.name P3F _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site IKJ "Create component" 2022-07-07 PDBJ IKJ "Initial release" 2023-07-26 RCSB IKJ "Modify backbone" 2023-11-03 PDBE #