data_IKN # _chem_comp.id IKN _chem_comp.name "(3~{R},5~{R})-5-[3-(2-aminophenyl)-1,2,4-oxadiazol-5-yl]-3-[2-[[methyl(prop-2-ynyl)amino]methyl]-1,3-thiazol-4-yl]pyrrolidin-3-ol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H22 N6 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-08-01 _chem_comp.pdbx_modified_date 2024-08-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 410.493 _chem_comp.one_letter_code ? _chem_comp.three_letter_code IKN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8Q12 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal IKN C10 C1 C 0 1 Y N N N N N 3.054 7.700 9.226 -3.505 2.488 0.410 C10 IKN 1 IKN C14 C2 C 0 1 N N R N N N 1.047 4.103 8.612 0.973 1.478 -1.006 C14 IKN 2 IKN C17 C3 C 0 1 Y N N N N N 0.109 3.012 9.226 2.257 0.977 -0.397 C17 IKN 3 IKN C16 C4 C 0 1 N N N N N N 2.420 4.995 10.116 -0.643 3.141 -0.544 C16 IKN 4 IKN C22 C5 C 0 1 Y N N N N N -2.745 1.120 10.176 5.317 -0.841 -0.206 C22 IKN 5 IKN C19 C6 C 0 1 Y N N N N N -1.491 1.698 9.892 4.104 -0.003 -0.047 C19 IKN 6 IKN C12 C7 C 0 1 N N R N N N 1.157 5.987 10.072 -1.085 1.892 0.259 C12 IKN 7 IKN C13 C8 C 0 1 N N N N N N 0.272 5.394 9.338 -0.228 0.763 -0.359 C13 IKN 8 IKN N20 N1 N 0 1 Y N N N N N -0.359 1.097 10.217 3.791 0.719 0.999 N20 IKN 9 IKN C01 C9 C 0 1 N N N N N N 0.690 11.345 11.135 -4.025 -2.344 0.421 C01 IKN 10 IKN C03 C10 C 0 1 N N N N N N 0.215 13.147 9.648 -6.155 -2.851 -0.612 C03 IKN 11 IKN C04 C11 C 0 1 N N N N N N -1.279 12.838 9.454 -6.610 -3.666 0.526 C04 IKN 12 IKN C05 C12 C 0 1 N N N N N N -2.426 12.608 9.305 -6.973 -4.316 1.434 C05 IKN 13 IKN C06 C13 C 0 1 N N N N N N 0.635 10.950 8.763 -4.984 -0.813 -1.191 C06 IKN 14 IKN C07 C14 C 0 1 Y N N N N N 1.418 9.633 8.987 -4.282 0.384 -0.603 C07 IKN 15 IKN C09 C15 C 0 1 Y N N N N N 1.703 7.447 9.536 -2.553 1.619 0.057 C09 IKN 16 IKN C23 C16 C 0 1 Y N N N N N -2.893 -0.250 10.012 5.526 -1.552 -1.386 C23 IKN 17 IKN C24 C17 C 0 1 Y N N N N N -4.119 -0.861 10.286 6.656 -2.330 -1.531 C24 IKN 18 IKN C25 C18 C 0 1 Y N N N N N -5.190 -0.092 10.728 7.585 -2.408 -0.507 C25 IKN 19 IKN C26 C19 C 0 1 Y N N N N N -5.039 1.283 10.900 7.390 -1.709 0.667 C26 IKN 20 IKN C27 C20 C 0 1 Y N N N N N -3.818 1.890 10.624 6.260 -0.918 0.825 C27 IKN 21 IKN N02 N2 N 0 1 N N N N N N 0.993 11.919 9.828 -5.268 -1.785 -0.127 N02 IKN 22 IKN N08 N3 N 0 1 Y N N N N N 0.896 8.478 9.408 -3.003 0.504 -0.482 N08 IKN 23 IKN N15 N4 N 0 1 N N N N N N 2.338 4.278 8.772 0.813 2.924 -0.738 N15 IKN 24 IKN N18 N5 N 0 1 Y N N N N N -1.215 2.867 9.269 3.116 0.162 -0.956 N18 IKN 25 IKN N28 N6 N 0 1 N N N N N N -3.658 3.316 10.801 6.064 -0.207 2.007 N28 IKN 26 IKN O21 O1 O 0 1 Y N N N N N 0.658 1.913 9.796 2.736 1.287 0.811 O21 IKN 27 IKN O29 O2 O 0 1 N N N N N N 0.637 6.176 11.362 -0.789 2.054 1.648 O29 IKN 28 IKN S11 S1 S 0 1 Y N N N N N 3.115 9.373 8.744 -5.065 1.775 0.008 S11 IKN 29 IKN H101 H1 H 0 0 N N N N N N 3.878 7.004 9.277 -3.346 3.455 0.864 H101 IKN 30 IKN H141 H2 H 0 0 N N N N N N 0.791 4.171 7.544 0.976 1.298 -2.081 H141 IKN 31 IKN H162 H3 H 0 0 N N N N N N 2.335 4.283 10.950 -1.158 3.182 -1.505 H162 IKN 32 IKN H161 H4 H 0 0 N N N N N N 3.361 5.557 10.208 -0.824 4.052 0.026 H161 IKN 33 IKN H132 H5 H 0 0 N N N N N N -0.113 6.085 8.574 -0.800 0.225 -1.114 H132 IKN 34 IKN H131 H6 H 0 0 N N N N N N -0.561 5.036 9.961 0.113 0.079 0.418 H131 IKN 35 IKN H013 H7 H 0 0 N N N N N N 1.272 10.422 11.275 -3.505 -2.905 -0.355 H013 IKN 36 IKN H011 H8 H 0 0 N N N N N N 0.953 12.067 11.922 -3.387 -1.533 0.772 H011 IKN 37 IKN H012 H9 H 0 0 N N N N N N -0.384 11.113 11.194 -4.261 -3.007 1.253 H012 IKN 38 IKN H032 H10 H 0 0 N N N N N N 0.588 13.681 8.762 -5.614 -3.482 -1.317 H032 IKN 39 IKN H031 H11 H 0 0 N N N N N N 0.337 13.782 10.538 -7.018 -2.408 -1.109 H031 IKN 40 IKN H051 H12 H 0 0 N N N N N N -3.457 12.401 9.171 -7.297 -4.898 2.246 H051 IKN 41 IKN H061 H13 H 0 0 N N N N N N -0.445 10.746 8.799 -5.919 -0.495 -1.653 H061 IKN 42 IKN H062 H14 H 0 0 N N N N N N 0.896 11.370 7.781 -4.345 -1.275 -1.945 H062 IKN 43 IKN H231 H15 H 0 0 N N N N N N -2.058 -0.845 9.672 4.804 -1.494 -2.187 H231 IKN 44 IKN H241 H16 H 0 0 N N N N N N -4.235 -1.927 10.155 6.817 -2.881 -2.446 H241 IKN 45 IKN H251 H17 H 0 0 N N N N N N -6.140 -0.561 10.938 8.467 -3.020 -0.628 H251 IKN 46 IKN H261 H18 H 0 0 N N N N N N -5.871 1.878 11.248 8.118 -1.774 1.462 H261 IKN 47 IKN H2 H20 H 0 1 N N N N N N 2.718 4.842 8.039 1.162 3.475 -1.508 H2 IKN 48 IKN H282 H22 H 0 0 N N N N N N -2.724 3.580 10.558 5.272 0.343 2.117 H282 IKN 49 IKN H281 H23 H 0 0 N N N N N N -4.305 3.800 10.211 6.719 -0.261 2.721 H281 IKN 50 IKN H291 H24 H 0 0 N N N N N N 0.314 5.348 11.698 -1.272 2.777 2.072 H291 IKN 51 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal IKN N02 C01 SING N N 1 IKN C04 C03 SING N N 2 IKN C05 C04 TRIP N N 3 IKN C03 N02 SING N N 4 IKN C06 N02 SING N N 5 IKN C07 C06 SING N N 6 IKN N08 C07 DOUB Y N 7 IKN C09 N08 SING Y N 8 IKN S11 C10 SING Y N 9 IKN C10 C09 DOUB Y N 10 IKN C12 C09 SING N N 11 IKN C14 C13 SING N N 12 IKN C16 N15 SING N N 13 IKN N15 C14 SING N N 14 IKN C17 C14 SING N N 15 IKN N18 C17 DOUB Y N 16 IKN C19 N18 SING Y N 17 IKN O21 N20 SING Y N 18 IKN N20 C19 DOUB Y N 19 IKN C22 C19 SING N N 20 IKN C23 C22 DOUB Y N 21 IKN C24 C23 SING Y N 22 IKN C25 C24 DOUB Y N 23 IKN C26 C25 SING Y N 24 IKN C27 C26 DOUB Y N 25 IKN N28 C27 SING N N 26 IKN C13 C12 SING N N 27 IKN O29 C12 SING N N 28 IKN C07 S11 SING Y N 29 IKN C12 C16 SING N N 30 IKN C17 O21 SING Y N 31 IKN C22 C27 SING Y N 32 IKN C10 H101 SING N N 33 IKN C14 H141 SING N N 34 IKN C16 H162 SING N N 35 IKN C16 H161 SING N N 36 IKN C13 H132 SING N N 37 IKN C13 H131 SING N N 38 IKN C01 H013 SING N N 39 IKN C01 H011 SING N N 40 IKN C01 H012 SING N N 41 IKN C03 H032 SING N N 42 IKN C03 H031 SING N N 43 IKN C05 H051 SING N N 44 IKN C06 H061 SING N N 45 IKN C06 H062 SING N N 46 IKN C23 H231 SING N N 47 IKN C24 H241 SING N N 48 IKN C25 H251 SING N N 49 IKN C26 H261 SING N N 50 IKN N15 H2 SING N N 51 IKN N28 H282 SING N N 52 IKN N28 H281 SING N N 53 IKN O29 H291 SING N N 54 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor IKN InChI InChI 1.06 "InChI=1S/C20H22N6O2S/c1-3-8-26(2)10-17-23-16(11-29-17)20(27)9-15(22-12-20)19-24-18(25-28-19)13-6-4-5-7-14(13)21/h1,4-7,11,15,22,27H,8-10,12,21H2,2H3/t15-,20-/m1/s1" IKN InChIKey InChI 1.06 KFCHSFALIDSDNT-FOIQADDNSA-N IKN SMILES_CANONICAL CACTVS 3.385 "CN(CC#C)Cc1scc(n1)[C@]2(O)CN[C@H](C2)c3onc(n3)c4ccccc4N" IKN SMILES CACTVS 3.385 "CN(CC#C)Cc1scc(n1)[C]2(O)CN[CH](C2)c3onc(n3)c4ccccc4N" IKN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(CC#C)Cc1nc(cs1)[C@]2(C[C@@H](NC2)c3nc(no3)c4ccccc4N)O" IKN SMILES "OpenEye OEToolkits" 2.0.7 "CN(CC#C)Cc1nc(cs1)C2(CC(NC2)c3nc(no3)c4ccccc4N)O" # _pdbx_chem_comp_identifier.comp_id IKN _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{R},5~{R})-5-[3-(2-aminophenyl)-1,2,4-oxadiazol-5-yl]-3-[2-[[methyl(prop-2-ynyl)amino]methyl]-1,3-thiazol-4-yl]pyrrolidin-3-ol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site IKN "Create component" 2023-08-01 PDBE IKN "Initial release" 2024-08-07 RCSB #