data_IN5
#
_chem_comp.id IN5
_chem_comp.name "{1-[(3-HYDROXY-METHYL-5-PHOSPHONOOXY-METHYL-PYRIDIN-4-YLMETHYL)-AMINO]-ETHYL}-PHOSPHONIC ACID"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C10 H18 N2 O8 P2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 356.206
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code IN5
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1BD0
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
IN5 C1 C1 C 0 1 Y N N 22.011 10.455 68.630 -1.421 -0.303 2.761 C1 IN5 1
IN5 C2 C2 C 0 1 Y N N 24.409 10.655 69.091 0.403 -0.133 4.157 C2 IN5 2
IN5 C3 C3 C 0 1 Y N N 24.351 12.037 68.832 1.222 0.244 3.103 C3 IN5 3
IN5 O4 O4 O 0 1 N N N 18.259 13.027 66.039 -2.595 -0.976 -1.994 O4 IN5 4
IN5 O5 O5 O 0 1 N N N 19.991 14.419 64.692 -4.870 -0.421 -1.052 O5 IN5 5
IN5 C7 C7 C 0 1 N N N 20.590 12.382 67.980 -1.307 0.170 0.300 C7 IN5 6
IN5 C8 C8 C 0 1 N N N 23.023 14.086 68.189 1.531 0.755 0.654 C8 IN5 7
IN5 C9 C9 C 0 1 N N R 24.176 16.085 67.454 2.930 0.023 -1.095 C9 IN5 8
IN5 C10 C10 C 0 1 N N N 23.213 17.149 68.030 4.096 -0.942 -1.314 C10 IN5 9
IN5 N1 N1 N 0 1 Y N N 23.245 9.878 68.989 -0.874 -0.392 3.957 N1 IN5 10
IN5 C4 C4 C 0 1 Y N N 23.113 12.633 68.469 0.677 0.348 1.827 C4 IN5 11
IN5 C5 C5 C 0 1 Y N N 21.935 11.826 68.371 -0.670 0.072 1.663 C5 IN5 12
IN5 O1 O1 O 0 1 N N N 25.499 12.812 68.928 2.538 0.510 3.315 O1 IN5 13
IN5 C6 C6 C 0 1 N N N 25.735 10.047 69.468 0.979 -0.250 5.545 C6 IN5 14
IN5 O2 O2 O 0 1 N N N 20.719 12.956 66.675 -2.691 -0.172 0.396 O2 IN5 15
IN5 N2 N2 N 0 1 N N N 24.109 14.878 68.231 2.115 -0.441 0.034 N2 IN5 16
IN5 P1 P1 P 0 1 N N N 19.594 13.884 66.136 -3.305 -0.047 -1.086 P1 IN5 17
IN5 O3 O3 O 0 1 N N N 19.389 15.135 67.095 -3.126 1.462 -1.616 O3 IN5 18
IN5 P2 P2 P 0 1 N N N 25.782 16.888 67.778 1.903 0.087 -2.600 P2 IN5 19
IN5 O6 O6 O 0 1 N N N 25.933 18.342 67.293 0.775 1.022 -2.388 O6 IN5 20
IN5 O7 O7 O 0 1 N N N 26.732 15.842 67.148 2.797 0.597 -3.838 O7 IN5 21
IN5 O8 O8 O 0 1 N N N 26.095 16.740 69.311 1.329 -1.381 -2.921 O8 IN5 22
IN5 H1 H1 H 0 1 N N N 21.103 9.832 68.551 -2.471 -0.523 2.638 H1 IN5 23
IN5 HO5 HO5 H 0 1 N N N 20.789 14.931 64.750 -5.198 -0.334 -1.957 HO5 IN5 24
IN5 H71 1H7 H 0 1 N N N 19.773 11.625 68.041 -1.210 1.189 -0.073 H71 IN5 25
IN5 H72 2H7 H 0 1 N N N 20.182 13.099 68.730 -0.809 -0.516 -0.383 H72 IN5 26
IN5 H81 1H8 H 0 1 N N N 22.543 14.214 67.190 2.329 1.413 0.997 H81 IN5 27
IN5 H82 2H8 H 0 1 N N N 22.255 14.520 68.871 0.916 1.280 -0.076 H82 IN5 28
IN5 H9 H9 H 0 1 N N N 23.971 15.805 66.394 3.318 1.018 -0.877 H9 IN5 29
IN5 H101 1H10 H 0 0 N N N 23.265 18.085 67.427 3.708 -1.937 -1.531 H101 IN5 30
IN5 H102 2H10 H 0 0 N N N 22.169 16.764 68.111 4.701 -0.597 -2.152 H102 IN5 31
IN5 H103 3H10 H 0 0 N N N 23.403 17.340 69.111 4.710 -0.980 -0.414 H103 IN5 32
IN5 HO1 HO1 H 0 1 N N N 25.459 13.745 68.753 2.603 1.453 3.518 HO1 IN5 33
IN5 H61 1H6 H 0 1 N N N 25.781 8.952 69.673 0.890 0.708 6.057 H61 IN5 34
IN5 H62 2H6 H 0 1 N N N 26.485 10.299 68.682 0.433 -1.011 6.102 H62 IN5 35
IN5 H63 3H6 H 0 1 N N N 26.148 10.597 70.345 2.030 -0.531 5.480 H63 IN5 36
IN5 HN2 HN2 H 0 1 N N N 24.924 14.309 68.003 1.348 -0.967 -0.357 HN2 IN5 37
IN5 HO3 HO3 H 0 1 N N N 20.187 15.647 67.153 -3.602 2.033 -0.998 HO3 IN5 38
IN5 HO7 HO7 H 0 1 N N N 27.568 16.260 67.316 2.217 0.616 -4.612 HO7 IN5 39
IN5 HO8 HO8 H 0 1 N N N 26.931 17.158 69.479 2.095 -1.958 -3.052 HO8 IN5 40
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
IN5 C1 N1 DOUB Y N 1
IN5 C1 C5 SING Y N 2
IN5 C1 H1 SING N N 3
IN5 C2 C3 DOUB Y N 4
IN5 C2 N1 SING Y N 5
IN5 C2 C6 SING N N 6
IN5 C3 C4 SING Y N 7
IN5 C3 O1 SING N N 8
IN5 O4 P1 DOUB N N 9
IN5 O5 P1 SING N N 10
IN5 O5 HO5 SING N N 11
IN5 C7 C5 SING N N 12
IN5 C7 O2 SING N N 13
IN5 C7 H71 SING N N 14
IN5 C7 H72 SING N N 15
IN5 C8 C4 SING N N 16
IN5 C8 N2 SING N N 17
IN5 C8 H81 SING N N 18
IN5 C8 H82 SING N N 19
IN5 C9 C10 SING N N 20
IN5 C9 N2 SING N N 21
IN5 C9 P2 SING N N 22
IN5 C9 H9 SING N N 23
IN5 C10 H101 SING N N 24
IN5 C10 H102 SING N N 25
IN5 C10 H103 SING N N 26
IN5 C4 C5 DOUB Y N 27
IN5 O1 HO1 SING N N 28
IN5 C6 H61 SING N N 29
IN5 C6 H62 SING N N 30
IN5 C6 H63 SING N N 31
IN5 O2 P1 SING N N 32
IN5 N2 HN2 SING N N 33
IN5 P1 O3 SING N N 34
IN5 O3 HO3 SING N N 35
IN5 P2 O6 DOUB N N 36
IN5 P2 O7 SING N N 37
IN5 P2 O8 SING N N 38
IN5 O7 HO7 SING N N 39
IN5 O8 HO8 SING N N 40
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
IN5 SMILES ACDLabs 10.04 "O=P(O)(O)OCc1cnc(c(O)c1CNC(C)P(=O)(O)O)C"
IN5 SMILES_CANONICAL CACTVS 3.341 "C[C@H](NCc1c(O)c(C)ncc1CO[P](O)(O)=O)[P](O)(O)=O"
IN5 SMILES CACTVS 3.341 "C[CH](NCc1c(O)c(C)ncc1CO[P](O)(O)=O)[P](O)(O)=O"
IN5 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "Cc1c(c(c(cn1)COP(=O)(O)O)CN[C@@H](C)P(=O)(O)O)O"
IN5 SMILES "OpenEye OEToolkits" 1.5.0 "Cc1c(c(c(cn1)COP(=O)(O)O)CNC(C)P(=O)(O)O)O"
IN5 InChI InChI 1.03 "InChI=1S/C10H18N2O8P2/c1-6-10(13)9(4-12-7(2)21(14,15)16)8(3-11-6)5-20-22(17,18)19/h3,7,12-13H,4-5H2,1-2H3,(H2,14,15,16)(H2,17,18,19)/t7-/m1/s1"
IN5 InChIKey InChI 1.03 WHDCJKAOZPBUAY-SSDOTTSWSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
IN5 "SYSTEMATIC NAME" ACDLabs 10.04 "{(1R)-1-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]ethyl}phosphonic acid"
IN5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(1R)-1-[[3-hydroxy-2-methyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]ethyl]phosphonic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
IN5 "Create component" 1999-07-08 RCSB
IN5 "Modify descriptor" 2011-06-04 RCSB
#