data_IP8 # _chem_comp.id IP8 _chem_comp.name "Isopentenyl phosphate" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C5 H11 O4 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "3-methylbut-3-en-1-yl dihydrogen phosphate" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2009-10-21 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 166.112 _chem_comp.one_letter_code ? _chem_comp.three_letter_code IP8 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3K52 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal IP8 O O O 0 1 N N N Y N Y 50.629 15.362 7.301 2.023 -0.892 -1.252 O IP8 1 IP8 C1 C1 C 0 1 N N N N N N 47.472 14.951 8.058 -0.751 -0.025 -0.102 C1 IP8 2 IP8 O1 O1 O 0 1 N N N N N N 48.667 15.240 8.784 0.472 -0.200 0.616 O1 IP8 3 IP8 P1 P1 P 0 1 N N N Y N Y 50.043 14.500 8.392 1.921 -0.016 -0.063 P1 IP8 4 IP8 C2 C2 C 0 1 N N N N N N 46.461 16.078 8.261 -1.933 -0.273 0.837 C2 IP8 5 IP8 O2 O2 O 0 1 N N N Y N Y 50.834 14.491 9.678 3.065 -0.416 0.997 O2 IP8 6 IP8 C3 C3 C 0 1 N N N N N N 45.157 15.730 7.577 -3.223 -0.089 0.081 C3 IP8 7 IP8 O3 O3 O 0 1 N Y N Y N Y 49.606 13.142 7.903 2.115 1.519 -0.509 O3 IP8 8 IP8 C4 C4 C 0 1 N N N N N N 43.858 15.924 8.302 -3.818 1.288 -0.070 C4 IP8 9 IP8 C5 C5 C 0 1 N N N N N N 45.160 15.255 6.343 -3.827 -1.125 -0.446 C5 IP8 10 IP8 H1 H1 H 0 1 N N N N N N 47.043 14.005 8.421 -0.802 0.992 -0.490 H1 IP8 11 IP8 H1A H1A H 0 1 N N N N N N 47.708 14.860 6.987 -0.790 -0.732 -0.930 H1A IP8 12 IP8 H2 H2 H 0 1 N N N N N N 46.282 16.218 9.337 -1.881 -1.290 1.225 H2 IP8 13 IP8 H2A H2A H 0 1 N N N N N N 46.861 17.008 7.832 -1.893 0.435 1.666 H2A IP8 14 IP8 HO2 HO2 H 0 1 N N N Y N Y 51.597 15.049 9.585 3.965 -0.329 0.656 HO2 IP8 15 IP8 HO3 HO3 H 0 1 N Y N Y N Y 49.781 13.069 6.972 2.060 2.150 0.222 HO3 IP8 16 IP8 H4 H4 H 0 1 N N N N N N 43.025 15.619 7.651 -3.180 2.016 0.430 H4 IP8 17 IP8 H4A H4A H 0 1 N N N N N N 43.853 15.311 9.215 -3.894 1.537 -1.129 H4A IP8 18 IP8 H4B H4B H 0 1 N N N N N N 43.744 16.984 8.572 -4.811 1.306 0.379 H4B IP8 19 IP8 H5 H5 H 0 1 N N N N N N 44.228 15.007 5.858 -4.752 -0.993 -0.988 H5 IP8 20 IP8 H5A H5A H 0 1 N N N N N N 46.095 15.115 5.820 -3.401 -2.111 -0.338 H5A IP8 21 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal IP8 O P1 DOUB N N 1 IP8 C1 C2 SING N N 2 IP8 C1 O1 SING N N 3 IP8 C1 H1 SING N N 4 IP8 C1 H1A SING N N 5 IP8 P1 O1 SING N N 6 IP8 O3 P1 SING N N 7 IP8 P1 O2 SING N N 8 IP8 C3 C2 SING N N 9 IP8 C2 H2 SING N N 10 IP8 C2 H2A SING N N 11 IP8 O2 HO2 SING N N 12 IP8 C5 C3 DOUB N N 13 IP8 C3 C4 SING N N 14 IP8 O3 HO3 SING N N 15 IP8 C4 H4 SING N N 16 IP8 C4 H4A SING N N 17 IP8 C4 H4B SING N N 18 IP8 C5 H5 SING N N 19 IP8 C5 H5A SING N N 20 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor IP8 SMILES ACDLabs 12.01 "O=P(OCCC(=C)\C)(O)O" IP8 InChI InChI 1.03 "InChI=1S/C5H11O4P/c1-5(2)3-4-9-10(6,7)8/h1,3-4H2,2H3,(H2,6,7,8)" IP8 InChIKey InChI 1.03 QMZRXYCCCYYMHF-UHFFFAOYSA-N IP8 SMILES_CANONICAL CACTVS 3.370 "CC(=C)CCO[P](O)(O)=O" IP8 SMILES CACTVS 3.370 "CC(=C)CCO[P](O)(O)=O" IP8 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(=C)CCOP(=O)(O)O" IP8 SMILES "OpenEye OEToolkits" 1.7.6 "CC(=C)CCOP(=O)(O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier IP8 "SYSTEMATIC NAME" ACDLabs 12.01 "3-methylbut-3-en-1-yl dihydrogen phosphate" IP8 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "3-methylbut-3-enyl dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site IP8 "Create component" 2009-10-21 RCSB IP8 "Modify descriptor" 2011-06-04 RCSB IP8 "Modify leaving atom flag" 2012-04-25 RCSB IP8 "Modify synonyms" 2020-06-05 PDBE IP8 "Modify backbone" 2023-11-03 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id IP8 _pdbx_chem_comp_synonyms.name "3-methylbut-3-en-1-yl dihydrogen phosphate" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? #