data_ISY # _chem_comp.id ISY _chem_comp.name "3-methylbut-3-enylsulfanyl(phosphonooxy)phosphinic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C5 H12 O6 P2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "Isopentyl S-Thiolodiphosphate" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-11-08 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 262.158 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ISY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3AQ0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ISY P1 P1 P 0 1 N N N -39.099 35.507 1.647 3.190 -0.166 0.207 P1 ISY 1 ISY O2 O2 O 0 1 N N N -40.519 35.722 0.934 1.748 0.547 0.158 O2 ISY 2 ISY P3 P3 P 0 1 N N N -41.600 34.577 0.709 0.266 0.049 -0.225 P3 ISY 3 ISY O4 O4 O 0 1 N N N -38.327 36.738 1.010 4.179 0.687 1.149 O4 ISY 4 ISY O5 O5 O 0 1 N N N -39.172 35.596 3.122 3.046 -1.534 0.753 O5 ISY 5 ISY O6 O6 O 0 1 N N N -38.338 34.223 1.024 3.801 -0.243 -1.281 O6 ISY 6 ISY O7 O7 O 0 1 N N N -41.036 33.224 0.855 -0.132 -1.055 0.677 O7 ISY 7 ISY O8 O8 O 0 1 N N N -42.371 34.937 -0.504 0.252 -0.472 -1.749 O8 ISY 8 ISY S9 S9 S 0 1 N N N -42.592 34.872 2.050 -1.098 1.658 -0.017 S9 ISY 9 ISY C10 C10 C 0 1 N N N -44.014 35.818 1.335 -2.684 0.913 -0.485 C10 ISY 10 ISY C11 C11 C 0 1 N N N -45.221 35.214 1.725 -3.181 0.017 0.651 C11 ISY 11 ISY C12 C12 C 0 1 N N N -46.363 35.785 2.293 -4.499 -0.603 0.262 C12 ISY 12 ISY C13 C13 C 0 1 N N N -46.536 37.292 2.551 -5.783 0.153 0.489 C13 ISY 13 ISY C14 C14 C 0 1 N N N -47.512 34.874 2.645 -4.528 -1.798 -0.274 C14 ISY 14 ISY HO4 HO4 H 0 1 N N N -38.043 37.326 1.700 5.069 0.315 1.224 HO4 ISY 15 ISY HO6 HO6 H 0 1 N N N -38.023 33.668 1.728 3.922 0.619 -1.702 HO6 ISY 16 ISY HO8 HO8 H 0 1 N N N -42.411 34.189 -1.088 0.504 0.200 -2.397 HO8 ISY 17 ISY H10 H10 H 0 1 N N N -43.987 36.854 1.703 -3.414 1.700 -0.673 H10 ISY 18 ISY H10A H10A H 0 0 N N N -43.941 35.816 0.237 -2.553 0.316 -1.388 H10A ISY 19 ISY H11 H11 H 0 1 N N N -45.598 34.778 0.788 -2.451 -0.770 0.839 H11 ISY 20 ISY H11A H11A H 0 0 N N N -44.903 34.483 2.482 -3.313 0.614 1.553 H11A ISY 21 ISY H13 H13 H 0 1 N N N -47.521 37.476 3.004 -6.013 0.753 -0.391 H13 ISY 22 ISY H13A H13A H 0 0 N N N -45.748 37.640 3.235 -6.593 -0.554 0.669 H13A ISY 23 ISY H13B H13B H 0 0 N N N -46.462 37.838 1.599 -5.672 0.806 1.355 H13B ISY 24 ISY H14 H14 H 0 1 N N N -48.419 35.285 3.064 -5.472 -2.241 -0.553 H14 ISY 25 ISY H14A H14A H 0 0 N N N -47.428 33.810 2.478 -3.608 -2.339 -0.437 H14A ISY 26 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ISY P1 O2 SING N N 1 ISY P1 O4 SING N N 2 ISY P1 O5 DOUB N N 3 ISY P1 O6 SING N N 4 ISY O2 P3 SING N N 5 ISY P3 O7 DOUB N N 6 ISY P3 O8 SING N N 7 ISY P3 S9 SING N N 8 ISY S9 C10 SING N N 9 ISY C10 C11 SING N N 10 ISY C11 C12 SING N N 11 ISY C12 C13 SING N N 12 ISY C12 C14 DOUB N N 13 ISY O4 HO4 SING N N 14 ISY O6 HO6 SING N N 15 ISY O8 HO8 SING N N 16 ISY C10 H10 SING N N 17 ISY C10 H10A SING N N 18 ISY C11 H11 SING N N 19 ISY C11 H11A SING N N 20 ISY C13 H13 SING N N 21 ISY C13 H13A SING N N 22 ISY C13 H13B SING N N 23 ISY C14 H14 SING N N 24 ISY C14 H14A SING N N 25 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ISY SMILES ACDLabs 12.01 "O=P(O)(OP(=O)(O)SCCC(=C)\C)O" ISY SMILES_CANONICAL CACTVS 3.370 "CC(=C)CCS[P](O)(=O)O[P](O)(O)=O" ISY SMILES CACTVS 3.370 "CC(=C)CCS[P](O)(=O)O[P](O)(O)=O" ISY SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CC(=C)CCS[P@@](=O)(O)OP(=O)(O)O" ISY SMILES "OpenEye OEToolkits" 1.7.0 "CC(=C)CCSP(=O)(O)OP(=O)(O)O" ISY InChI InChI 1.03 "InChI=1S/C5H12O6P2S/c1-5(2)3-4-14-13(9,10)11-12(6,7)8/h1,3-4H2,2H3,(H,9,10)(H2,6,7,8)" ISY InChIKey InChI 1.03 YLTQZUVQWVAPNP-UHFFFAOYSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ISY "SYSTEMATIC NAME" ACDLabs 12.01 "S-(3-methylbut-3-en-1-yl) trihydrogen thiodiphosphate" ISY "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "3-methylbut-3-enylsulfanyl(phosphonooxy)phosphinic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ISY "Create component" 2010-11-08 PDBJ ISY "Modify descriptor" 2011-06-04 RCSB ISY "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id ISY _pdbx_chem_comp_synonyms.name "Isopentyl S-Thiolodiphosphate" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##