data_IT3 # _chem_comp.id IT3 _chem_comp.name "(1S,2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]-2-{[N-({[(1R,2R)-2-propylcyclopropyl]methoxy}carbonyl)-L-leucyl]amino}propane-1-sulfonic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H37 N3 O8 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-01-27 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 491.599 _chem_comp.one_letter_code ? _chem_comp.three_letter_code IT3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7TQ6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal IT3 C15 C1 C 0 1 N N N N N N 14.408 22.305 27.777 -0.817 1.343 2.071 C15 IT3 1 IT3 C19 C2 C 0 1 N N N N N N 10.791 24.169 26.047 2.928 -0.287 0.182 C19 IT3 2 IT3 C22 C3 C 0 1 N N R N N N 9.550 27.560 24.726 6.514 -0.472 -0.661 C22 IT3 3 IT3 C16 C4 C 0 1 N N N N N N 14.806 21.505 26.534 -0.573 0.245 3.108 C16 IT3 4 IT3 C17 C5 C 0 1 N N N N N N 15.525 22.208 28.871 -1.024 2.681 2.784 C17 IT3 5 IT3 C24 C6 C 0 1 N N N N N N 9.832 28.087 23.323 7.253 -1.719 -1.148 C24 IT3 6 IT3 C25 C7 C 0 1 N N N N N N 11.560 29.370 24.878 9.073 0.034 -0.468 C25 IT3 7 IT3 C26 C8 C 0 1 N N N N N N 12.690 29.271 25.948 10.308 -0.407 0.320 C26 IT3 8 IT3 C27 C9 C 0 1 N N N N N N 13.187 30.582 26.591 11.505 0.459 -0.080 C27 IT3 9 IT3 O28 O1 O 0 1 N N N N N N 10.212 23.383 25.303 2.886 -0.788 1.289 O28 IT3 10 IT3 N11 N1 N 0 1 N N N N N N 10.021 20.460 27.411 -1.867 -0.175 -0.153 N11 IT3 11 IT3 C01 C10 C 0 1 N N S N N N 9.036 18.476 28.454 -3.217 1.115 -1.732 C01 IT3 12 IT3 C03 C11 C 0 1 N N S N N N 8.761 19.882 27.843 -2.991 -0.254 -1.089 C03 IT3 13 IT3 C04 C12 C 0 1 N N N N N N 7.750 19.758 26.677 -4.253 -0.677 -0.334 C04 IT3 14 IT3 C05 C13 C 0 1 N N S N N N 7.360 21.101 26.057 -4.088 -2.111 0.174 C05 IT3 15 IT3 C06 C14 C 0 1 N N N N N N 6.391 21.050 24.882 -5.327 -2.555 0.919 C06 IT3 16 IT3 C08 C15 C 0 1 N N N N N N 5.478 22.671 26.285 -4.748 -4.325 -0.468 C08 IT3 17 IT3 C09 C16 C 0 1 N N N N N N 6.528 21.878 27.081 -3.985 -3.097 -1.012 C09 IT3 18 IT3 C12 C17 C 0 1 N N N N N N 10.479 21.703 27.752 -0.616 0.015 -0.618 C12 IT3 19 IT3 C13 C18 C 0 1 N N S N N N 11.863 22.256 27.227 0.535 0.143 0.347 C13 IT3 20 IT3 C14 C19 C 0 1 N N N N N N 12.979 21.938 28.268 0.393 1.443 1.140 C14 IT3 21 IT3 C21 C20 C 0 1 N N N N N N 9.424 26.018 25.062 5.282 -0.680 0.222 C21 IT3 22 IT3 C23 C21 C 0 1 N N S N N N 10.981 28.060 24.318 7.877 -0.832 -0.067 C23 IT3 23 IT3 N07 N2 N 0 1 N N N N N N 5.330 21.939 25.034 -5.677 -3.795 0.537 N07 IT3 24 IT3 N18 N3 N 0 1 N N N N N N 11.755 23.694 26.926 1.797 0.160 -0.398 N18 IT3 25 IT3 O02 O2 O 0 1 N N N N N N 7.826 17.939 28.946 -4.384 1.068 -2.555 O02 IT3 26 IT3 O10 O3 O 0 1 N N N N N N 6.549 20.299 23.937 -5.918 -1.889 1.743 O10 IT3 27 IT3 O20 O4 O 0 1 N N N N N N 10.441 25.506 25.983 4.104 -0.178 -0.463 O20 IT3 28 IT3 O29 O5 O 0 1 N N N N N N 9.807 22.445 28.463 -0.416 0.083 -1.812 O29 IT3 29 IT3 SG S1 S 0 1 N Y N N N N 9.820 17.414 27.207 -3.441 2.363 -0.436 SG IT3 30 IT3 H1 H1 H 0 1 N N N N N N 14.368 23.361 27.472 -1.705 1.101 1.487 H1 IT3 31 IT3 H2 H2 H 0 1 N N N N N N 8.988 28.231 25.393 6.469 0.383 -1.336 H2 IT3 32 IT3 H3 H3 H 0 1 N N N N N N 15.820 21.794 26.221 -1.453 0.144 3.743 H3 IT3 33 IT3 H4 H4 H 0 1 N N N N N N 14.787 20.430 26.768 -0.382 -0.699 2.599 H4 IT3 34 IT3 H5 H5 H 0 1 N N N N N N 14.097 21.716 25.720 0.289 0.509 3.721 H5 IT3 35 IT3 H6 H6 H 0 1 N N N N N N 15.223 22.788 29.756 -1.197 3.464 2.045 H6 IT3 36 IT3 H7 H7 H 0 1 N N N N N N 15.670 21.155 29.154 -1.886 2.610 3.447 H7 IT3 37 IT3 H8 H8 H 0 1 N N N N N N 16.466 22.613 28.471 -0.136 2.923 3.367 H8 IT3 38 IT3 H9 H9 H 0 1 N N N N N N 9.407 29.052 23.008 6.863 -2.689 -0.839 H9 IT3 39 IT3 H10 H10 H 0 1 N N N N N N 9.834 27.392 22.471 7.695 -1.686 -2.144 H10 IT3 40 IT3 H11 H11 H 0 1 N N N N N N 11.963 29.940 24.028 8.855 1.079 -0.248 H11 IT3 41 IT3 H12 H12 H 0 1 N N N N N N 12.318 28.628 26.759 10.118 -0.293 1.387 H12 IT3 42 IT3 H13 H13 H 0 1 N N N N N N 13.979 30.356 27.321 11.287 1.504 0.140 H13 IT3 43 IT3 H14 H14 H 0 1 N N N N N N 13.587 31.245 25.810 12.384 0.145 0.481 H14 IT3 44 IT3 H15 H15 H 0 1 N N N N N N 12.350 31.080 27.101 11.695 0.345 -1.148 H15 IT3 45 IT3 H16 H16 H 0 1 N N N N N N 10.601 19.904 26.816 -2.022 -0.259 0.801 H16 IT3 46 IT3 H17 H17 H 0 1 N N N N N N 9.771 18.583 29.265 -2.352 1.376 -2.343 H17 IT3 47 IT3 H18 H18 H 0 1 N N N N N N 8.313 20.515 28.624 -2.768 -0.988 -1.863 H18 IT3 48 IT3 H19 H19 H 0 1 N N N N N N 6.839 19.273 27.057 -4.412 -0.008 0.512 H19 IT3 49 IT3 H20 H20 H 0 1 N N N N N N 8.199 19.131 25.893 -5.112 -0.626 -1.004 H20 IT3 50 IT3 H21 H21 H 0 1 N N N N N N 8.260 21.672 25.786 -3.207 -2.189 0.813 H21 IT3 51 IT3 H22 H22 H 0 1 N N N N N N 5.828 23.696 26.095 -5.299 -4.813 -1.272 H22 IT3 52 IT3 H23 H23 H 0 1 N N N N N N 4.523 22.705 26.830 -4.053 -5.027 -0.008 H23 IT3 53 IT3 H24 H24 H 0 1 N N N N N N 6.033 21.182 27.774 -4.475 -2.694 -1.898 H24 IT3 54 IT3 H25 H25 H 0 1 N N N N N N 7.172 22.565 27.650 -2.945 -3.346 -1.224 H25 IT3 55 IT3 H26 H26 H 0 1 N N N N N N 12.105 21.716 26.300 0.530 -0.704 1.033 H26 IT3 56 IT3 H27 H27 H 0 1 N N N N N N 12.770 22.506 29.187 0.254 2.276 0.451 H27 IT3 57 IT3 H28 H28 H 0 1 N N N N N N 12.953 20.861 28.489 1.294 1.608 1.732 H28 IT3 58 IT3 H29 H29 H 0 1 N N N N N N 8.436 25.846 25.513 5.157 -1.744 0.426 H29 IT3 59 IT3 H30 H30 H 0 1 N N N N N N 9.501 25.455 24.120 5.412 -0.143 1.161 H30 IT3 60 IT3 H31 H31 H 0 1 N N N N N N 11.716 27.256 24.164 7.896 -1.218 0.952 H31 IT3 61 IT3 H32 H32 H 0 1 N N N N N N 4.580 22.057 24.383 -6.445 -4.278 0.880 H32 IT3 62 IT3 H33 H33 H 0 1 N N N N N N 12.385 24.337 27.361 1.818 0.493 -1.309 H33 IT3 63 IT3 H34 H34 H 0 1 N N N N N N 7.457 18.529 29.592 -5.193 0.841 -2.078 H34 IT3 64 IT3 O2 O6 O 0 1 N Y N N N N ? ? ? -3.780 3.640 -1.192 O2 IT3 65 IT3 O1 O7 O 0 1 N Y N N N N 9.747 15.781 27.975 -4.609 2.087 0.326 O1 IT3 66 IT3 O3 O8 O 0 1 N Y N N N N ? ? ? -2.203 2.651 0.200 O3 IT3 67 IT3 H36 H36 H 0 1 N N N N N N 10.728 29.928 25.332 9.263 -0.080 -1.535 H36 IT3 68 IT3 H37 H37 H 0 1 N N N N N N 13.556 28.792 25.468 10.526 -1.452 0.100 H37 IT3 69 IT3 H35 H35 H 0 1 N Y N N N N ? ? ? -3.930 4.407 -0.622 H35 IT3 70 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal IT3 C24 C23 SING N N 1 IT3 C24 C22 SING N N 2 IT3 O10 C06 DOUB N N 3 IT3 C23 C22 SING N N 4 IT3 C23 C25 SING N N 5 IT3 C22 C21 SING N N 6 IT3 C25 C26 SING N N 7 IT3 C06 N07 SING N N 8 IT3 C06 C05 SING N N 9 IT3 N07 C08 SING N N 10 IT3 C21 O20 SING N N 11 IT3 O28 C19 DOUB N N 12 IT3 C26 C27 SING N N 13 IT3 O20 C19 SING N N 14 IT3 C19 N18 SING N N 15 IT3 C05 C04 SING N N 16 IT3 C05 C09 SING N N 17 IT3 C08 C09 SING N N 18 IT3 C16 C15 SING N N 19 IT3 C04 C03 SING N N 20 IT3 N18 C13 SING N N 21 IT3 SG C01 SING N N 22 IT3 C13 C12 SING N N 23 IT3 C13 C14 SING N N 24 IT3 N11 C12 SING N N 25 IT3 N11 C03 SING N N 26 IT3 C12 O29 DOUB N N 27 IT3 C15 C14 SING N N 28 IT3 C15 C17 SING N N 29 IT3 C03 C01 SING N N 30 IT3 C01 O02 SING N N 31 IT3 C15 H1 SING N N 32 IT3 C22 H2 SING N N 33 IT3 C16 H3 SING N N 34 IT3 C16 H4 SING N N 35 IT3 C16 H5 SING N N 36 IT3 C17 H6 SING N N 37 IT3 C17 H7 SING N N 38 IT3 C17 H8 SING N N 39 IT3 C24 H9 SING N N 40 IT3 C24 H10 SING N N 41 IT3 C25 H11 SING N N 42 IT3 C26 H12 SING N N 43 IT3 C27 H13 SING N N 44 IT3 C27 H14 SING N N 45 IT3 C27 H15 SING N N 46 IT3 N11 H16 SING N N 47 IT3 C01 H17 SING N N 48 IT3 C03 H18 SING N N 49 IT3 C04 H19 SING N N 50 IT3 C04 H20 SING N N 51 IT3 C05 H21 SING N N 52 IT3 C08 H22 SING N N 53 IT3 C08 H23 SING N N 54 IT3 C09 H24 SING N N 55 IT3 C09 H25 SING N N 56 IT3 C13 H26 SING N N 57 IT3 C14 H27 SING N N 58 IT3 C14 H28 SING N N 59 IT3 C21 H29 SING N N 60 IT3 C21 H30 SING N N 61 IT3 C23 H31 SING N N 62 IT3 N07 H32 SING N N 63 IT3 N18 H33 SING N N 64 IT3 O02 H34 SING N N 65 IT3 SG O2 SING N N 66 IT3 SG O1 DOUB N N 67 IT3 SG O3 DOUB N N 68 IT3 C25 H36 SING N N 69 IT3 C26 H37 SING N N 70 IT3 O2 H35 SING N N 71 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor IT3 SMILES ACDLabs 12.01 "CC(C)CC(NC(=O)OCC1CC1CCC)C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O" IT3 InChI InChI 1.03 "InChI=1S/C21H37N3O8S/c1-4-5-13-9-15(13)11-32-21(28)24-16(8-12(2)3)19(26)23-17(20(27)33(29,30)31)10-14-6-7-22-18(14)25/h12-17,20,27H,4-11H2,1-3H3,(H,22,25)(H,23,26)(H,24,28)(H,29,30,31)/t13-,14+,15+,16+,17+,20+/m1/s1" IT3 InChIKey InChI 1.03 ZYXQADHLOGEXOL-VRCAPQLRSA-N IT3 SMILES_CANONICAL CACTVS 3.385 "CCC[C@@H]1C[C@H]1COC(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](C[C@@H]2CCNC2=O)[C@@H](O)[S](O)(=O)=O" IT3 SMILES CACTVS 3.385 "CCC[CH]1C[CH]1COC(=O)N[CH](CC(C)C)C(=O)N[CH](C[CH]2CCNC2=O)[CH](O)[S](O)(=O)=O" IT3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC[C@@H]1C[C@H]1COC(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](C[C@@H]2CCNC2=O)[C@@H](O)S(=O)(=O)O" IT3 SMILES "OpenEye OEToolkits" 2.0.7 "CCCC1CC1COC(=O)NC(CC(C)C)C(=O)NC(CC2CCNC2=O)C(O)S(=O)(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier IT3 "SYSTEMATIC NAME" ACDLabs 12.01 "(1S,2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]-2-{[N-({[(1R,2R)-2-propylcyclopropyl]methoxy}carbonyl)-L-leucyl]amino}propane-1-sulfonic acid" IT3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{S},2~{S})-2-[[(2~{S})-4-methyl-2-[[(1~{R},2~{R})-2-propylcyclopropyl]methoxycarbonylamino]pentanoyl]amino]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propane-1-sulfonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site IT3 "Create component" 2022-01-27 RCSB IT3 "Modify coordinates" 2022-01-27 RCSB IT3 "Initial release" 2022-02-09 RCSB IT3 "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id IT3 _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C01 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #