data_IVO # _chem_comp.id IVO _chem_comp.name "(5~{S},6~{R},7~{S},8~{S})-6,7,8-tris(oxidanyl)-5,6,7,8-tetrahydroimidazo[1,2-a]pyridine-5-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C8 H10 N2 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-07-20 _chem_comp.pdbx_modified_date 2022-12-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 214.175 _chem_comp.one_letter_code ? _chem_comp.three_letter_code IVO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7YJC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal IVO O15 O1 O 0 1 N N N -16.610 5.851 20.477 2.548 -1.306 -0.897 O15 IVO 1 IVO C10 C1 C 0 1 N N N -15.367 5.785 20.701 2.304 -0.458 -0.072 C10 IVO 2 IVO O14 O2 O 0 1 N N N -14.760 6.391 21.643 3.263 0.396 0.317 O14 IVO 3 IVO C1 C2 C 0 1 N N S -14.605 4.897 19.774 0.920 -0.354 0.515 C1 IVO 4 IVO N6 N1 N 0 1 Y N N -15.048 3.490 19.946 0.360 0.968 0.224 N6 IVO 5 IVO C9 C3 C 0 1 Y N N -15.372 2.915 21.107 0.987 2.175 0.304 C9 IVO 6 IVO C8 C4 C 0 1 Y N N -15.725 1.622 20.796 0.082 3.107 -0.058 C8 IVO 7 IVO N7 N2 N 0 1 Y N N -15.598 1.445 19.460 -1.068 2.478 -0.351 N7 IVO 8 IVO C5 C5 C 0 1 Y N N -15.196 2.617 18.939 -0.910 1.197 -0.184 C5 IVO 9 IVO C4 C6 C 0 1 N N S -14.948 2.914 17.496 -1.939 0.111 -0.394 C4 IVO 10 IVO O12 O3 O 0 1 N N N -14.227 1.844 16.839 -3.187 0.512 0.176 O12 IVO 11 IVO C3 C7 C 0 1 N N S -14.218 4.275 17.415 -1.438 -1.163 0.298 C3 IVO 12 IVO O11 O4 O 0 1 N N N -14.188 4.723 16.059 -2.250 -2.271 -0.098 O11 IVO 13 IVO C2 C8 C 0 1 N N R -14.877 5.310 18.344 0.015 -1.422 -0.111 C2 IVO 14 IVO O13 O5 O 0 1 N N N -14.423 6.660 18.193 0.416 -2.714 0.348 O13 IVO 15 IVO H1 H1 H 0 1 N N N -15.385 6.898 22.148 4.134 0.293 -0.091 H1 IVO 16 IVO H2 H2 H 0 1 N N N -13.528 4.978 19.982 0.969 -0.501 1.594 H2 IVO 17 IVO H3 H3 H 0 1 N N N -15.360 3.370 22.086 2.011 2.352 0.600 H3 IVO 18 IVO H4 H4 H 0 1 N N N -16.050 0.872 21.502 0.251 4.172 -0.105 H4 IVO 19 IVO H5 H5 H 0 1 N N N -15.923 3.035 17.002 -2.065 -0.075 -1.461 H5 IVO 20 IVO H6 H6 H 0 1 N N N -14.718 1.035 16.919 -3.550 1.323 -0.204 H6 IVO 21 IVO H7 H7 H 0 1 N N N -13.187 4.120 17.766 -1.496 -1.037 1.379 H7 IVO 22 IVO H8 H8 H 0 1 N N N -13.739 5.559 16.011 -3.185 -2.174 0.126 H8 IVO 23 IVO H9 H9 H 0 1 N N N -15.963 5.271 18.176 0.100 -1.379 -1.196 H9 IVO 24 IVO H10 H10 H 0 1 N N N -14.885 7.220 18.805 -0.114 -3.440 -0.008 H10 IVO 25 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal IVO O11 C3 SING N N 1 IVO O12 C4 SING N N 2 IVO C3 C4 SING N N 3 IVO C3 C2 SING N N 4 IVO C4 C5 SING N N 5 IVO O13 C2 SING N N 6 IVO C2 C1 SING N N 7 IVO C5 N7 DOUB Y N 8 IVO C5 N6 SING Y N 9 IVO N7 C8 SING Y N 10 IVO C1 N6 SING N N 11 IVO C1 C10 SING N N 12 IVO N6 C9 SING Y N 13 IVO O15 C10 DOUB N N 14 IVO C10 O14 SING N N 15 IVO C8 C9 DOUB Y N 16 IVO O14 H1 SING N N 17 IVO C1 H2 SING N N 18 IVO C9 H3 SING N N 19 IVO C8 H4 SING N N 20 IVO C4 H5 SING N N 21 IVO O12 H6 SING N N 22 IVO C3 H7 SING N N 23 IVO O11 H8 SING N N 24 IVO C2 H9 SING N N 25 IVO O13 H10 SING N N 26 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor IVO InChI InChI 1.06 "InChI=1S/C8H10N2O5/c11-4-3(8(14)15)10-2-1-9-7(10)6(13)5(4)12/h1-6,11-13H,(H,14,15)/t3-,4+,5-,6+/m0/s1" IVO InChIKey InChI 1.06 YLDYISMFCJKSRS-BGPJRJDNSA-N IVO SMILES_CANONICAL CACTVS 3.385 "O[C@H]1[C@H](O)[C@H](n2ccnc2[C@@H]1O)C(O)=O" IVO SMILES CACTVS 3.385 "O[CH]1[CH](O)[CH](n2ccnc2[CH]1O)C(O)=O" IVO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cn2c(n1)[C@@H]([C@H]([C@@H]([C@H]2C(=O)O)O)O)O" IVO SMILES "OpenEye OEToolkits" 2.0.7 "c1cn2c(n1)C(C(C(C2C(=O)O)O)O)O" # _pdbx_chem_comp_identifier.comp_id IVO _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(5~{S},6~{R},7~{S},8~{S})-6,7,8-tris(oxidanyl)-5,6,7,8-tetrahydroimidazo[1,2-a]pyridine-5-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site IVO "Create component" 2022-07-20 PDBJ IVO "Initial release" 2022-12-07 RCSB #