data_IWJ # _chem_comp.id IWJ _chem_comp.name "(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-1-[(1~{S},4~{S})-2,2-dimethyl-6-methylidene-1,4-bis(oxidanyl)cyclohexyl]-3,7,12,16-tetramethyl-18-[(1~{R},4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohex-2-en-1-yl]octadeca-3,5,7,9,11,13,15,17-octaen-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C40 H56 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms Prasinoxanthin _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-07-21 _chem_comp.pdbx_modified_date 2023-04-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 600.870 _chem_comp.one_letter_code ? _chem_comp.three_letter_code IWJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7YCA _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal IWJ C01 C1 C 0 1 N N N 96.306 146.575 238.065 -11.970 -1.957 -1.824 C01 IWJ 1 IWJ C02 C2 C 0 1 N N N 95.194 145.620 237.889 -12.743 -0.957 -1.003 C02 IWJ 2 IWJ C03 C3 C 0 1 N N N 95.310 144.478 238.618 -14.009 -1.161 -0.832 C03 IWJ 3 IWJ C04 C4 C 0 1 N N R 94.073 143.803 239.242 -14.906 -0.261 -0.033 C04 IWJ 4 IWJ C05 C5 C 0 1 N N N 92.750 144.159 238.538 -14.236 1.099 0.175 C05 IWJ 5 IWJ C06 C6 C 0 1 N N N 92.631 145.634 238.112 -12.809 0.864 0.686 C06 IWJ 6 IWJ C07 C7 C 0 1 N N R 93.872 146.124 237.310 -11.994 0.210 -0.430 C07 IWJ 7 IWJ C08 C8 C 0 1 N N N 93.893 147.626 237.103 -10.676 -0.265 0.124 C08 IWJ 8 IWJ C09 C9 C 0 1 N N N 93.584 148.232 235.928 -9.531 0.226 -0.361 C09 IWJ 9 IWJ C10 C10 C 0 1 N N N 93.594 149.731 235.651 -8.291 -0.221 0.159 C10 IWJ 10 IWJ C11 C11 C 0 1 N N N 93.409 150.141 234.378 -7.127 0.279 -0.334 C11 IWJ 11 IWJ C12 C12 C 0 1 N N N 93.400 151.504 233.920 -5.897 -0.164 0.182 C12 IWJ 12 IWJ C13 C13 C 0 1 N N N 93.939 151.828 232.726 -4.727 0.338 -0.314 C13 IWJ 13 IWJ C14 C14 C 0 1 N N N 94.014 153.170 232.135 -3.502 -0.104 0.201 C14 IWJ 14 IWJ C15 C15 C 0 1 N N N 94.055 153.258 230.789 -2.322 0.403 -0.299 C15 IWJ 15 IWJ C16 C16 C 0 1 N N N 94.113 154.449 229.983 -1.098 -0.038 0.214 C16 IWJ 16 IWJ C17 C17 C 0 1 N N N 94.494 154.403 228.700 0.084 0.469 -0.287 C17 IWJ 17 IWJ C18 C18 C 0 1 N N N 94.530 155.582 227.874 1.306 0.028 0.227 C18 IWJ 18 IWJ C19 C19 C 0 1 N N N 94.618 155.610 226.527 2.489 0.536 -0.275 C19 IWJ 19 IWJ C20 C20 C 0 1 N N N 94.714 154.388 225.665 2.461 1.565 -1.375 C20 IWJ 20 IWJ C21 C21 C 0 1 N N N 94.612 156.911 225.849 3.710 0.096 0.238 C21 IWJ 21 IWJ C22 C22 C 0 1 N N N 94.048 157.141 224.646 4.894 0.603 -0.263 C22 IWJ 22 IWJ C23 C23 C 0 1 N N N 94.055 158.436 224.019 6.115 0.163 0.250 C23 IWJ 23 IWJ C24 C24 C 0 1 N N N 93.850 158.683 222.710 7.299 0.671 -0.252 C24 IWJ 24 IWJ C25 C25 C 0 1 N N N 93.587 157.626 221.682 7.270 1.700 -1.353 C25 IWJ 25 IWJ C26 C26 C 0 1 N N N 93.894 160.068 222.265 8.519 0.231 0.261 C26 IWJ 26 IWJ C28 C27 C 0 1 N N N 93.266 161.184 223.095 9.810 0.785 -0.287 C28 IWJ 27 IWJ C29 C28 C 0 1 N N S 93.984 162.527 222.919 10.991 0.141 0.443 C29 IWJ 28 IWJ C30 C29 C 0 1 N N N 93.641 163.127 221.639 11.036 -1.338 0.130 C30 IWJ 29 IWJ C31 C30 C 0 1 N N N 92.537 162.859 220.931 10.056 -1.918 -0.519 C31 IWJ 30 IWJ C32 C31 C 0 1 N N N 94.556 164.349 221.418 12.241 -2.131 0.585 C32 IWJ 31 IWJ C33 C32 C 0 1 N N S 94.619 165.339 222.588 13.506 -1.411 0.108 C33 IWJ 32 IWJ C34 C33 C 0 1 N N N 93.660 164.975 223.725 13.483 0.037 0.600 C34 IWJ 33 IWJ C35 C34 C 0 1 N N N 93.616 163.471 224.060 12.299 0.783 -0.030 C35 IWJ 34 IWJ C36 C35 C 0 1 N N N 92.171 163.239 224.530 12.392 0.691 -1.554 C36 IWJ 35 IWJ C37 C36 C 0 1 N N N 94.551 163.234 225.267 12.329 2.253 0.396 C37 IWJ 36 IWJ C40 C37 C 0 1 N N N 94.049 154.339 233.071 -3.474 -1.133 1.302 C40 IWJ 37 IWJ C41 C38 C 0 1 N N N 93.820 150.651 236.812 -8.263 -1.249 1.260 C41 IWJ 38 IWJ C42 C39 C 0 1 N N N 91.354 145.805 237.268 -12.177 2.202 1.077 C42 IWJ 39 IWJ C43 C40 C 0 1 N N N 92.472 146.482 239.387 -12.844 -0.063 1.902 C43 IWJ 40 IWJ O27 O1 O 0 1 N N N 94.443 160.332 221.202 8.542 -0.599 1.149 O27 IWJ 41 IWJ O38 O2 O 0 1 N N N 94.362 166.655 222.126 13.556 -1.429 -1.320 O38 IWJ 42 IWJ O39 O3 O 0 1 N N N 95.364 162.295 222.946 10.845 0.329 1.852 O39 IWJ 43 IWJ O44 O4 O 0 1 N N N 94.236 142.394 239.308 -16.139 -0.080 -0.731 O44 IWJ 44 IWJ H1 H1 H 0 1 N N N 97.176 146.052 238.489 -12.643 -2.744 -2.165 H1 IWJ 45 IWJ H2 H2 H 0 1 N N N 96.577 147.006 237.090 -11.530 -1.457 -2.686 H2 IWJ 46 IWJ H3 H3 H 0 1 N N N 95.994 147.380 238.747 -11.180 -2.395 -1.214 H3 IWJ 47 IWJ H5 H5 H 0 1 N N N 96.285 144.037 238.762 -14.449 -2.033 -1.294 H5 IWJ 48 IWJ H7 H7 H 0 1 N N N 93.993 144.185 240.271 -15.103 -0.717 0.937 H7 IWJ 49 IWJ H8 H8 H 0 1 N N N 91.923 143.932 239.226 -14.203 1.640 -0.771 H8 IWJ 50 IWJ H9 H9 H 0 1 N N N 92.660 143.533 237.638 -14.801 1.677 0.908 H9 IWJ 51 IWJ H10 H10 H 0 1 N N N 93.783 145.674 236.310 -11.811 0.943 -1.216 H10 IWJ 52 IWJ H11 H11 H 0 1 N N N 94.170 148.250 237.939 -10.656 -1.002 0.913 H11 IWJ 53 IWJ H12 H12 H 0 1 N N N 93.303 147.588 235.108 -9.551 0.964 -1.150 H12 IWJ 54 IWJ H13 H13 H 0 1 N N N 93.253 149.374 233.634 -7.147 1.016 -1.123 H13 IWJ 55 IWJ H14 H14 H 0 1 N N N 92.959 152.274 234.536 -5.877 -0.901 0.971 H14 IWJ 56 IWJ H15 H15 H 0 1 N N N 94.358 151.018 232.147 -4.748 1.075 -1.103 H15 IWJ 57 IWJ H16 H16 H 0 1 N N N 94.043 152.321 230.252 -2.342 1.140 -1.088 H16 IWJ 58 IWJ H17 H17 H 0 1 N N N 93.844 155.399 230.422 -1.078 -0.776 1.003 H17 IWJ 59 IWJ H18 H18 H 0 1 N N N 94.783 153.454 228.272 0.064 1.206 -1.076 H18 IWJ 60 IWJ H19 H19 H 0 1 N N N 94.482 156.535 228.380 1.326 -0.709 1.016 H19 IWJ 61 IWJ H20 H20 H 0 1 N N N 94.708 153.490 226.300 2.430 2.563 -0.939 H20 IWJ 62 IWJ H21 H21 H 0 1 N N N 93.856 154.356 224.977 3.356 1.464 -1.990 H21 IWJ 63 IWJ H22 H22 H 0 1 N N N 95.648 154.421 225.085 1.577 1.411 -1.994 H22 IWJ 64 IWJ H23 H23 H 0 1 N N N 95.092 157.741 226.347 3.730 -0.642 1.027 H23 IWJ 65 IWJ H24 H24 H 0 1 N N N 93.571 156.319 224.132 4.874 1.341 -1.052 H24 IWJ 66 IWJ H25 H25 H 0 1 N N N 94.242 159.288 224.656 6.135 -0.574 1.038 H25 IWJ 67 IWJ H26 H26 H 0 1 N N N 93.583 156.637 222.164 7.239 2.698 -0.917 H26 IWJ 68 IWJ H27 H27 H 0 1 N N N 92.610 157.808 221.211 8.165 1.600 -1.967 H27 IWJ 69 IWJ H28 H28 H 0 1 N N N 94.375 157.657 220.915 6.386 1.546 -1.972 H28 IWJ 70 IWJ H29 H29 H 0 1 N N N 92.216 161.303 222.788 9.877 0.565 -1.352 H29 IWJ 71 IWJ H30 H30 H 0 1 N N N 93.307 160.899 224.157 9.835 1.864 -0.136 H30 IWJ 72 IWJ H31 H31 H 0 1 N N N 91.816 162.146 221.304 9.253 -1.323 -0.929 H31 IWJ 73 IWJ H32 H32 H 0 1 N N N 92.367 163.356 219.987 10.052 -2.990 -0.645 H32 IWJ 74 IWJ H33 H33 H 0 1 N N N 95.575 163.981 221.229 12.245 -2.198 1.673 H33 IWJ 75 IWJ H34 H34 H 0 1 N N N 94.192 164.891 220.533 12.205 -3.132 0.154 H34 IWJ 76 IWJ H35 H35 H 0 1 N N N 95.640 165.300 222.995 14.385 -1.916 0.509 H35 IWJ 77 IWJ H36 H36 H 0 1 N N N 93.973 165.520 224.628 13.382 0.050 1.685 H36 IWJ 78 IWJ H37 H37 H 0 1 N N N 92.647 165.294 223.437 14.412 0.531 0.317 H37 IWJ 79 IWJ H38 H38 H 0 1 N N N 91.936 163.932 225.351 11.724 1.426 -2.004 H38 IWJ 80 IWJ H39 H39 H 0 1 N N N 91.480 163.415 223.692 13.416 0.890 -1.869 H39 IWJ 81 IWJ H40 H40 H 0 1 N N N 92.062 162.203 224.883 12.100 -0.309 -1.876 H40 IWJ 82 IWJ H41 H41 H 0 1 N N N 94.278 163.919 226.083 12.264 2.318 1.482 H41 IWJ 83 IWJ H42 H42 H 0 1 N N N 94.449 162.194 225.611 13.260 2.709 0.059 H42 IWJ 84 IWJ H43 H43 H 0 1 N N N 95.593 163.420 224.966 11.485 2.777 -0.051 H43 IWJ 85 IWJ H44 H44 H 0 1 N N N 94.002 153.979 234.110 -3.443 -2.131 0.865 H44 IWJ 86 IWJ H45 H45 H 0 1 N N N 94.982 154.902 232.920 -2.590 -0.979 1.921 H45 IWJ 87 IWJ H46 H46 H 0 1 N N N 93.189 154.995 232.871 -4.369 -1.032 1.916 H46 IWJ 88 IWJ H47 H47 H 0 1 N N N 93.941 150.059 237.731 -8.232 -2.248 0.824 H47 IWJ 89 IWJ H48 H48 H 0 1 N N N 94.729 151.246 236.637 -7.379 -1.095 1.879 H48 IWJ 90 IWJ H49 H49 H 0 1 N N N 92.957 151.324 236.920 -9.158 -1.149 1.874 H49 IWJ 91 IWJ H50 H50 H 0 1 N N N 90.484 145.456 237.844 -12.770 2.668 1.863 H50 IWJ 92 IWJ H51 H51 H 0 1 N N N 91.223 146.867 237.013 -11.163 2.032 1.439 H51 IWJ 93 IWJ H52 H52 H 0 1 N N N 91.443 145.214 236.344 -12.146 2.858 0.207 H52 IWJ 94 IWJ H53 H53 H 0 1 N N N 93.372 146.379 240.011 -13.288 -1.017 1.619 H53 IWJ 95 IWJ H54 H54 H 0 1 N N N 92.337 147.538 239.110 -11.828 -0.228 2.262 H54 IWJ 96 IWJ H55 H55 H 0 1 N N N 91.593 146.135 239.951 -13.440 0.395 2.691 H55 IWJ 97 IWJ H56 H56 H 0 1 N N N 94.403 167.261 222.856 13.572 -2.317 -1.701 H56 IWJ 98 IWJ H57 H57 H 0 1 N N N 95.573 161.561 222.380 10.039 -0.058 2.219 H57 IWJ 99 IWJ H58 H58 H 0 1 N N N 95.055 142.190 239.744 -16.626 -0.901 -0.890 H58 IWJ 100 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal IWJ C31 C30 DOUB N N 1 IWJ O27 C26 DOUB N N 2 IWJ C32 C30 SING N N 3 IWJ C32 C33 SING N N 4 IWJ C30 C29 SING N N 5 IWJ C25 C24 SING N N 6 IWJ O38 C33 SING N N 7 IWJ C26 C24 SING N N 8 IWJ C26 C28 SING N N 9 IWJ C33 C34 SING N N 10 IWJ C24 C23 DOUB N E 11 IWJ C29 O39 SING N N 12 IWJ C29 C28 SING N N 13 IWJ C29 C35 SING N N 14 IWJ C34 C35 SING N N 15 IWJ C23 C22 SING N N 16 IWJ C35 C36 SING N N 17 IWJ C35 C37 SING N N 18 IWJ C22 C21 DOUB N E 19 IWJ C20 C19 SING N N 20 IWJ C21 C19 SING N N 21 IWJ C19 C18 DOUB N E 22 IWJ C18 C17 SING N N 23 IWJ C17 C16 DOUB N E 24 IWJ C16 C15 SING N N 25 IWJ C15 C14 DOUB N E 26 IWJ C14 C13 SING N N 27 IWJ C14 C40 SING N N 28 IWJ C13 C12 DOUB N E 29 IWJ C12 C11 SING N N 30 IWJ C11 C10 DOUB N E 31 IWJ C10 C09 SING N N 32 IWJ C10 C41 SING N N 33 IWJ C09 C08 DOUB N E 34 IWJ C08 C07 SING N N 35 IWJ C42 C06 SING N N 36 IWJ C07 C02 SING N N 37 IWJ C07 C06 SING N N 38 IWJ C02 C01 SING N N 39 IWJ C02 C03 DOUB N N 40 IWJ C06 C05 SING N N 41 IWJ C06 C43 SING N N 42 IWJ C05 C04 SING N N 43 IWJ C03 C04 SING N N 44 IWJ C04 O44 SING N N 45 IWJ C01 H1 SING N N 46 IWJ C01 H2 SING N N 47 IWJ C01 H3 SING N N 48 IWJ C03 H5 SING N N 49 IWJ C04 H7 SING N N 50 IWJ C05 H8 SING N N 51 IWJ C05 H9 SING N N 52 IWJ C07 H10 SING N N 53 IWJ C08 H11 SING N N 54 IWJ C09 H12 SING N N 55 IWJ C11 H13 SING N N 56 IWJ C12 H14 SING N N 57 IWJ C13 H15 SING N N 58 IWJ C15 H16 SING N N 59 IWJ C16 H17 SING N N 60 IWJ C17 H18 SING N N 61 IWJ C18 H19 SING N N 62 IWJ C20 H20 SING N N 63 IWJ C20 H21 SING N N 64 IWJ C20 H22 SING N N 65 IWJ C21 H23 SING N N 66 IWJ C22 H24 SING N N 67 IWJ C23 H25 SING N N 68 IWJ C25 H26 SING N N 69 IWJ C25 H27 SING N N 70 IWJ C25 H28 SING N N 71 IWJ C28 H29 SING N N 72 IWJ C28 H30 SING N N 73 IWJ C31 H31 SING N N 74 IWJ C31 H32 SING N N 75 IWJ C32 H33 SING N N 76 IWJ C32 H34 SING N N 77 IWJ C33 H35 SING N N 78 IWJ C34 H36 SING N N 79 IWJ C34 H37 SING N N 80 IWJ C36 H38 SING N N 81 IWJ C36 H39 SING N N 82 IWJ C36 H40 SING N N 83 IWJ C37 H41 SING N N 84 IWJ C37 H42 SING N N 85 IWJ C37 H43 SING N N 86 IWJ C40 H44 SING N N 87 IWJ C40 H45 SING N N 88 IWJ C40 H46 SING N N 89 IWJ C41 H47 SING N N 90 IWJ C41 H48 SING N N 91 IWJ C41 H49 SING N N 92 IWJ C42 H50 SING N N 93 IWJ C42 H51 SING N N 94 IWJ C42 H52 SING N N 95 IWJ C43 H53 SING N N 96 IWJ C43 H54 SING N N 97 IWJ C43 H55 SING N N 98 IWJ O38 H56 SING N N 99 IWJ O39 H57 SING N N 100 IWJ O44 H58 SING N N 101 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor IWJ InChI InChI 1.06 "InChI=1S/C40H56O4/c1-28(17-13-18-30(3)21-22-36-32(5)23-34(41)25-38(36,7)8)15-11-12-16-29(2)19-14-20-31(4)37(43)27-40(44)33(6)24-35(42)26-39(40,9)10/h11-23,34-36,41-42,44H,6,24-27H2,1-5,7-10H3/b12-11+,17-13+,19-14+,22-21+,28-15+,29-16+,30-18+,31-20+/t34-,35+,36-,40+/m0/s1" IWJ InChIKey InChI 1.06 WOJYJHBMWRNRJG-ITGJSFTBSA-N IWJ SMILES_CANONICAL CACTVS 3.385 "CC(=C/C=C/C=C(C)/C=C/C=C(\C)C(=O)C[C@@]1(O)C(=C)C[C@@H](O)CC1(C)C)\C=C\C=C(C)\C=C\[C@H]2C(=C[C@H](O)CC2(C)C)C" IWJ SMILES CACTVS 3.385 "CC(=CC=CC=C(C)C=CC=C(C)C(=O)C[C]1(O)C(=C)C[CH](O)CC1(C)C)C=CC=C(C)C=C[CH]2C(=C[CH](O)CC2(C)C)C" IWJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1=C[C@@H](CC([C@H]1/C=C/C(=C/C=C/C(=C/C=C/C=C(\C)/C=C/C=C(\C)/C(=O)C[C@]2(C(=C)C[C@H](CC2(C)C)O)O)/C)/C)(C)C)O" IWJ SMILES "OpenEye OEToolkits" 2.0.7 "CC1=CC(CC(C1C=CC(=CC=CC(=CC=CC=C(C)C=CC=C(C)C(=O)CC2(C(=C)CC(CC2(C)C)O)O)C)C)(C)C)O" # _pdbx_chem_comp_identifier.comp_id IWJ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-1-[(1~{S},4~{S})-2,2-dimethyl-6-methylidene-1,4-bis(oxidanyl)cyclohexyl]-3,7,12,16-tetramethyl-18-[(1~{R},4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohex-2-en-1-yl]octadeca-3,5,7,9,11,13,15,17-octaen-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site IWJ "Create component" 2022-07-21 PDBJ IWJ "Initial release" 2023-04-26 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id IWJ _pdbx_chem_comp_synonyms.name Prasinoxanthin _pdbx_chem_comp_synonyms.provenance PUBCHEM _pdbx_chem_comp_synonyms.type ? #