data_IXC # _chem_comp.id IXC _chem_comp.name "3-hydroxy-N-{(3P)-3-[(4P)-2-(methylsulfanyl)-5-{2-[4-(piperazin-1-yl)anilino]pyridin-4-yl}-1H-imidazol-4-yl]phenyl}-2-[(1-oxo-1,3-dihydro-2H-isoindol-2-yl)methyl]benzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C41 H38 N8 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-08-03 _chem_comp.pdbx_modified_date 2024-08-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 722.857 _chem_comp.one_letter_code ? _chem_comp.three_letter_code IXC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8TO3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal IXC C10 C1 C 0 1 Y N N N N N 27.287 -15.771 -14.980 -1.828 3.757 -0.052 C10 IXC 1 IXC C13 C2 C 0 1 Y N N N N N 27.136 -17.134 -11.299 -3.294 0.488 -1.178 C13 IXC 2 IXC C15 C3 C 0 1 Y N N N N N 28.612 -15.323 -11.360 -4.786 1.462 0.299 C15 IXC 3 IXC C17 C4 C 0 1 Y N N N N N 30.465 -13.455 -11.122 -6.898 0.357 0.706 C17 IXC 4 IXC C20 C5 C 0 1 Y N N N N N 32.369 -11.505 -11.825 -8.672 -1.702 0.174 C20 IXC 5 IXC C22 C6 C 0 1 N N N N N N 34.738 -11.018 -12.580 -9.483 -3.162 -1.501 C22 IXC 6 IXC C26 C7 C 0 1 N N N N N N 32.979 -9.455 -13.230 -9.340 -3.881 0.806 C26 IXC 7 IXC C28 C8 C 0 1 Y N N N N N 31.412 -12.959 -10.194 -7.714 -0.134 1.716 C28 IXC 8 IXC C02 C9 C 0 1 N N N N N N 21.705 -20.538 -16.267 4.691 0.605 -0.189 C02 IXC 9 IXC C04 C10 C 0 1 Y N N N N N 23.190 -18.530 -15.542 2.424 1.320 -0.276 C04 IXC 10 IXC C05 C11 C 0 1 Y N N N N N 22.327 -18.004 -14.568 1.907 0.172 0.313 C05 IXC 11 IXC C06 C12 C 0 1 Y N N N N N 22.696 -16.836 -13.937 0.628 0.176 0.837 C06 IXC 12 IXC C07 C13 C 0 1 Y N N N N N 23.893 -16.204 -14.268 -0.143 1.319 0.779 C07 IXC 13 IXC C08 C14 C 0 1 Y N N N N N 24.740 -16.757 -15.228 0.367 2.476 0.190 C08 IXC 14 IXC C09 C15 C 0 1 Y N N N N N 26.139 -16.105 -15.706 -0.459 3.704 0.126 C09 IXC 15 IXC C11 C16 C 0 1 Y N N N N N 27.507 -15.982 -13.408 -2.744 2.613 -0.213 C11 IXC 16 IXC C12 C17 C 0 1 Y N N N N N 26.870 -16.999 -12.671 -2.415 1.540 -1.058 C12 IXC 17 IXC C18 C18 C 0 1 Y N N N N N 30.485 -12.963 -12.400 -6.975 -0.181 -0.572 C18 IXC 18 IXC C19 C19 C 0 1 Y N N N N N 31.447 -11.981 -12.765 -7.859 -1.207 -0.837 C19 IXC 19 IXC C23 C20 C 0 1 N N N N N N 35.617 -10.091 -13.434 -10.531 -4.243 -1.773 C23 IXC 20 IXC C25 C21 C 0 1 N N N N N N 33.985 -8.297 -13.298 -10.388 -4.962 0.534 C25 IXC 21 IXC C27 C22 C 0 1 Y N N N N N 32.364 -11.989 -10.547 -8.599 -1.161 1.451 C27 IXC 22 IXC C29 C23 C 0 1 Y N N N N N 28.386 -15.150 -12.738 -3.957 2.559 0.482 C29 IXC 23 IXC C31 C24 C 0 1 Y N N N N N 27.633 -15.239 -17.081 -1.019 5.804 0.133 C31 IXC 24 IXC C33 C25 C 0 1 N N N N N N 28.796 -16.322 -19.398 0.884 7.745 0.449 C33 IXC 25 IXC C35 C26 C 0 1 Y N N N N N 24.364 -17.921 -15.843 1.657 2.473 -0.339 C35 IXC 26 IXC C36 C27 C 0 1 Y N N N N N 21.815 -21.821 -17.048 6.082 0.676 -0.684 C36 IXC 27 IXC C37 C28 C 0 1 Y N N N N N 21.679 -21.790 -18.446 7.106 0.029 0.008 C37 IXC 28 IXC C38 C29 C 0 1 N N N N N N 21.380 -20.447 -19.182 6.798 -0.742 1.266 C38 IXC 29 IXC C40 C30 C 0 1 N N N N N N 19.760 -19.760 -21.040 7.303 -3.148 0.815 C40 IXC 30 IXC C41 C31 C 0 1 Y N N N N N 18.261 -19.993 -21.367 6.583 -4.383 0.451 C41 IXC 31 IXC C42 C32 C 0 1 Y N N N N N 17.459 -19.558 -22.431 7.015 -5.692 0.226 C42 IXC 32 IXC C43 C33 C 0 1 Y N N N N N 16.097 -19.913 -22.502 6.099 -6.668 -0.109 C43 IXC 33 IXC C44 C34 C 0 1 Y N N N N N 15.544 -20.703 -21.493 4.756 -6.356 -0.223 C44 IXC 34 IXC C45 C35 C 0 1 Y N N N N N 16.343 -21.146 -20.419 4.320 -5.060 -0.003 C45 IXC 35 IXC C46 C36 C 0 1 Y N N N N N 17.714 -20.784 -20.360 5.225 -4.080 0.333 C46 IXC 36 IXC C47 C37 C 0 1 N N N N N N 18.830 -21.081 -19.344 5.089 -2.608 0.632 C47 IXC 37 IXC C49 C38 C 0 1 Y N N N N N 21.818 -22.981 -19.121 8.406 0.095 -0.465 C49 IXC 38 IXC C51 C39 C 0 1 Y N N N N N 22.092 -24.112 -18.428 8.688 0.805 -1.624 C51 IXC 39 IXC C52 C40 C 0 1 Y N N N N N 22.236 -24.126 -17.019 7.674 1.448 -2.311 C52 IXC 40 IXC C53 C41 C 0 1 Y N N N N N 22.099 -22.948 -16.340 6.376 1.388 -1.849 C53 IXC 41 IXC N03 N1 N 0 1 N N N N N N 22.954 -19.788 -16.258 3.721 1.314 -0.800 N03 IXC 42 IXC N14 N2 N 0 1 Y N N N N N 27.980 -16.297 -10.699 -4.436 0.475 -0.513 N14 IXC 43 IXC N16 N3 N 0 1 N N N N N N 29.521 -14.458 -10.617 -6.000 1.398 0.975 N16 IXC 44 IXC N21 N4 N 0 1 N N N N N N 33.376 -10.492 -12.216 -9.569 -2.742 -0.095 N21 IXC 45 IXC N24 N5 N 0 1 N N N N N N 35.351 -8.687 -13.275 -10.302 -5.381 -0.872 N24 IXC 46 IXC N30 N6 N 0 1 Y N N N N N 28.189 -15.254 -15.852 -2.170 5.098 -0.041 N30 IXC 47 IXC N34 N7 N 0 1 Y N N N N N 26.369 -15.792 -16.965 -0.010 4.969 0.231 N34 IXC 48 IXC N39 N8 N 0 1 N N N N N N 20.050 -20.447 -19.815 6.443 -2.120 0.920 N39 IXC 49 IXC O01 O1 O 0 1 N N N N N N 20.706 -20.207 -15.683 4.422 -0.094 0.769 O01 IXC 50 IXC O48 O2 O 0 1 N N N N N N 20.568 -19.141 -21.647 8.503 -3.071 0.998 O48 IXC 51 IXC O50 O3 O 0 1 N N N N N N 21.683 -23.020 -20.486 9.406 -0.534 0.207 O50 IXC 52 IXC S32 S1 S 0 1 N N N N N N 28.319 -14.708 -18.688 -0.901 7.560 0.213 S32 IXC 53 IXC H1 H1 H 0 1 N N N N N N 26.656 -17.917 -10.730 -3.049 -0.338 -1.829 H1 IXC 54 IXC H2 H2 H 0 1 N N N N N N 34.598 -11.955 -13.138 -8.488 -3.561 -1.701 H2 IXC 55 IXC H3 H3 H 0 1 N N N N N N 35.279 -11.225 -11.645 -9.667 -2.304 -2.148 H3 IXC 56 IXC H4 H4 H 0 1 N N N N N N 31.993 -9.052 -12.957 -9.421 -3.548 1.841 H4 IXC 57 IXC H5 H5 H 0 1 N N N N N N 32.920 -9.931 -14.220 -8.344 -4.288 0.632 H5 IXC 58 IXC H6 H6 H 0 1 N N N N N N 31.402 -13.338 -9.183 -7.658 0.286 2.709 H6 IXC 59 IXC H7 H7 H 0 1 N N N N N N 21.400 -18.500 -14.320 2.506 -0.725 0.362 H7 IXC 60 IXC H8 H8 H 0 1 N N N N N N 22.054 -16.408 -13.182 0.231 -0.719 1.293 H8 IXC 61 IXC H9 H9 H 0 1 N N N N N N 24.166 -15.281 -13.778 -1.142 1.318 1.189 H9 IXC 62 IXC H10 H10 H 0 1 N N N N N N 26.180 -17.672 -13.159 -1.484 1.540 -1.605 H10 IXC 63 IXC H11 H11 H 0 1 N N N N N N 29.772 -13.320 -13.129 -6.342 0.205 -1.359 H11 IXC 64 IXC H12 H12 H 0 1 N N N N N N 31.466 -11.600 -13.775 -7.919 -1.625 -1.832 H12 IXC 65 IXC H13 H13 H 0 1 N N N N N N 35.460 -10.351 -14.491 -11.527 -3.836 -1.599 H13 IXC 66 IXC H14 H14 H 0 1 N N N N N N 36.668 -10.272 -13.164 -10.449 -4.576 -2.808 H14 IXC 67 IXC H15 H15 H 0 1 N N N N N N 33.804 -7.637 -12.437 -10.203 -5.819 1.181 H15 IXC 68 IXC H16 H16 H 0 1 N N N N N N 33.804 -7.742 -14.230 -11.383 -4.563 0.734 H16 IXC 69 IXC H17 H17 H 0 1 N N N N N N 33.080 -11.632 -9.821 -9.231 -1.546 2.238 H17 IXC 70 IXC H18 H18 H 0 1 N N N N N N 28.900 -14.366 -13.274 -4.242 3.358 1.150 H18 IXC 71 IXC H19 H19 H 0 1 N N N N N N 29.238 -16.169 -20.394 1.183 7.238 1.367 H19 IXC 72 IXC H20 H20 H 0 1 N N N N N N 29.532 -16.808 -18.741 1.410 7.304 -0.397 H20 IXC 73 IXC H21 H21 H 0 1 N N N N N N 27.905 -16.961 -19.486 1.133 8.803 0.521 H21 IXC 74 IXC H22 H22 H 0 1 N N N N N N 25.015 -18.363 -16.583 2.057 3.366 -0.796 H22 IXC 75 IXC H23 H23 H 0 1 N N N N N N 22.143 -20.291 -19.959 7.675 -0.744 1.914 H23 IXC 76 IXC H24 H24 H 0 1 N N N N N N 21.426 -19.625 -18.453 5.964 -0.271 1.786 H24 IXC 77 IXC H25 H25 H 0 1 N N N N N N 17.890 -18.943 -23.207 8.062 -5.939 0.314 H25 IXC 78 IXC H26 H26 H 0 1 N N N N N N 15.488 -19.577 -23.328 6.433 -7.680 -0.283 H26 IXC 79 IXC H27 H27 H 0 1 N N N N N N 14.500 -20.976 -21.535 4.045 -7.126 -0.486 H27 IXC 80 IXC H28 H28 H 0 1 N N N N N N 15.912 -21.760 -19.642 3.272 -4.820 -0.093 H28 IXC 81 IXC H29 H29 H 0 1 N N N N N N 18.555 -20.675 -18.359 4.680 -2.086 -0.233 H29 IXC 82 IXC H30 H30 H 0 1 N N N N N N 18.982 -22.168 -19.264 4.445 -2.459 1.498 H30 IXC 83 IXC H31 H31 H 0 1 N N N N N N 22.205 -25.039 -18.971 9.702 0.856 -1.990 H31 IXC 84 IXC H32 H32 H 0 1 N N N N N N 22.449 -25.045 -16.494 7.900 1.998 -3.212 H32 IXC 85 IXC H33 H33 H 0 1 N N N N N N 22.213 -22.912 -15.267 5.586 1.887 -2.390 H33 IXC 86 IXC H34 H34 H 0 1 N N N N N N 23.716 -20.163 -16.786 3.923 1.820 -1.602 H34 IXC 87 IXC H35 H35 H 0 1 N N N N N N 29.498 -14.563 -9.623 -6.226 2.074 1.633 H35 IXC 88 IXC H36 H36 H 0 1 N N N N N N 35.734 -8.402 -12.396 -10.948 -6.131 -1.066 H36 IXC 89 IXC H38 H38 H 0 1 N N N N N N 29.110 -14.938 -15.623 -3.061 5.466 -0.143 H38 IXC 90 IXC H40 H40 H 0 1 N N N N N N 21.808 -23.911 -20.792 9.559 -1.445 -0.078 H40 IXC 91 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal IXC C43 C42 DOUB Y N 1 IXC C43 C44 SING Y N 2 IXC C42 C41 SING Y N 3 IXC O48 C40 DOUB N N 4 IXC C44 C45 DOUB Y N 5 IXC C41 C40 SING N N 6 IXC C41 C46 DOUB Y N 7 IXC C40 N39 SING N N 8 IXC O50 C49 SING N N 9 IXC C45 C46 SING Y N 10 IXC C46 C47 SING N N 11 IXC N39 C47 SING N N 12 IXC N39 C38 SING N N 13 IXC C33 S32 SING N N 14 IXC C38 C37 SING N N 15 IXC C49 C37 DOUB Y N 16 IXC C49 C51 SING Y N 17 IXC S32 C31 SING N N 18 IXC C37 C36 SING Y N 19 IXC C51 C52 DOUB Y N 20 IXC C31 N34 DOUB Y N 21 IXC C31 N30 SING Y N 22 IXC C36 C53 DOUB Y N 23 IXC C36 C02 SING N N 24 IXC C52 C53 SING Y N 25 IXC N34 C09 SING Y N 26 IXC C02 N03 SING N N 27 IXC C02 O01 DOUB N N 28 IXC N03 C04 SING N N 29 IXC N30 C10 SING Y N 30 IXC C35 C04 DOUB Y N 31 IXC C35 C08 SING Y N 32 IXC C09 C08 SING N N 33 IXC C09 C10 DOUB Y N 34 IXC C04 C05 SING Y N 35 IXC C08 C07 DOUB Y N 36 IXC C10 C11 SING N N 37 IXC C05 C06 DOUB Y N 38 IXC C07 C06 SING Y N 39 IXC C23 N24 SING N N 40 IXC C23 C22 SING N N 41 IXC C11 C29 DOUB Y N 42 IXC C11 C12 SING Y N 43 IXC C25 N24 SING N N 44 IXC C25 C26 SING N N 45 IXC C26 N21 SING N N 46 IXC C19 C18 DOUB Y N 47 IXC C19 C20 SING Y N 48 IXC C29 C15 SING Y N 49 IXC C12 C13 DOUB Y N 50 IXC C22 N21 SING N N 51 IXC C18 C17 SING Y N 52 IXC N21 C20 SING N N 53 IXC C20 C27 DOUB Y N 54 IXC C15 N14 DOUB Y N 55 IXC C15 N16 SING N N 56 IXC C13 N14 SING Y N 57 IXC C17 N16 SING N N 58 IXC C17 C28 DOUB Y N 59 IXC C27 C28 SING Y N 60 IXC C13 H1 SING N N 61 IXC C22 H2 SING N N 62 IXC C22 H3 SING N N 63 IXC C26 H4 SING N N 64 IXC C26 H5 SING N N 65 IXC C28 H6 SING N N 66 IXC C05 H7 SING N N 67 IXC C06 H8 SING N N 68 IXC C07 H9 SING N N 69 IXC C12 H10 SING N N 70 IXC C18 H11 SING N N 71 IXC C19 H12 SING N N 72 IXC C23 H13 SING N N 73 IXC C23 H14 SING N N 74 IXC C25 H15 SING N N 75 IXC C25 H16 SING N N 76 IXC C27 H17 SING N N 77 IXC C29 H18 SING N N 78 IXC C33 H19 SING N N 79 IXC C33 H20 SING N N 80 IXC C33 H21 SING N N 81 IXC C35 H22 SING N N 82 IXC C38 H23 SING N N 83 IXC C38 H24 SING N N 84 IXC C42 H25 SING N N 85 IXC C43 H26 SING N N 86 IXC C44 H27 SING N N 87 IXC C45 H28 SING N N 88 IXC C47 H29 SING N N 89 IXC C47 H30 SING N N 90 IXC C51 H31 SING N N 91 IXC C52 H32 SING N N 92 IXC C53 H33 SING N N 93 IXC N03 H34 SING N N 94 IXC N16 H35 SING N N 95 IXC N24 H36 SING N N 96 IXC N30 H38 SING N N 97 IXC O50 H40 SING N N 98 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor IXC SMILES ACDLabs 12.01 "CSc1[NH]c(c2ccnc(Nc3ccc(cc3)N3CCNCC3)c2)c(n1)c1cc(ccc1)NC(=O)c1cccc(O)c1CN1Cc2ccccc2C1=O" IXC InChI InChI 1.06 "InChI=1S/C41H38N8O3S/c1-53-41-46-37(38(47-41)27-16-17-43-36(23-27)44-29-12-14-31(15-13-29)48-20-18-42-19-21-48)26-7-4-8-30(22-26)45-39(51)33-10-5-11-35(50)34(33)25-49-24-28-6-2-3-9-32(28)40(49)52/h2-17,22-23,42,50H,18-21,24-25H2,1H3,(H,43,44)(H,45,51)(H,46,47)" IXC InChIKey InChI 1.06 DBLFPZMZQSDENE-UHFFFAOYSA-N IXC SMILES_CANONICAL CACTVS 3.385 "CSc1[nH]c(c2ccnc(Nc3ccc(cc3)N4CCNCC4)c2)c(n1)c5cccc(NC(=O)c6cccc(O)c6CN7Cc8ccccc8C7=O)c5" IXC SMILES CACTVS 3.385 "CSc1[nH]c(c2ccnc(Nc3ccc(cc3)N4CCNCC4)c2)c(n1)c5cccc(NC(=O)c6cccc(O)c6CN7Cc8ccccc8C7=O)c5" IXC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CSc1[nH]c(c(n1)c2cccc(c2)NC(=O)c3cccc(c3CN4Cc5ccccc5C4=O)O)c6ccnc(c6)Nc7ccc(cc7)N8CCNCC8" IXC SMILES "OpenEye OEToolkits" 2.0.7 "CSc1[nH]c(c(n1)c2cccc(c2)NC(=O)c3cccc(c3CN4Cc5ccccc5C4=O)O)c6ccnc(c6)Nc7ccc(cc7)N8CCNCC8" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier IXC "SYSTEMATIC NAME" ACDLabs 12.01 "3-hydroxy-N-{(3P)-3-[(4P)-2-(methylsulfanyl)-5-{2-[4-(piperazin-1-yl)anilino]pyridin-4-yl}-1H-imidazol-4-yl]phenyl}-2-[(1-oxo-1,3-dihydro-2H-isoindol-2-yl)methyl]benzamide" IXC "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[3-[2-methylsulfanyl-5-[2-[(4-piperazin-1-ylphenyl)amino]pyridin-4-yl]-1~{H}-imidazol-4-yl]phenyl]-3-oxidanyl-2-[(3-oxidanylidene-1~{H}-isoindol-2-yl)methyl]benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site IXC "Create component" 2023-08-03 RCSB IXC "Initial release" 2024-08-28 RCSB #