data_IY0 # _chem_comp.id IY0 _chem_comp.name "[5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)furan-2-yl]methyl dihydrogen phosphate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C9 H10 N3 O8 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-08-02 _chem_comp.pdbx_modified_date 2023-07-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 319.165 _chem_comp.one_letter_code ? _chem_comp.three_letter_code IY0 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7YOQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal IY0 C13 C1 C 0 1 Y N N 27.284 51.283 24.210 -0.953 1.835 -0.045 C13 IY0 1 IY0 C1 C2 C 0 1 N N N 30.798 51.640 27.991 -5.122 -0.965 0.277 C1 IY0 2 IY0 C2 C3 C 0 1 N N N 31.171 51.801 26.617 -4.873 0.387 0.587 C2 IY0 3 IY0 C3 C4 C 0 1 N N N 30.220 51.913 25.628 -3.619 0.877 0.430 C3 IY0 4 IY0 C5 C5 C 0 1 N N N 28.718 51.742 27.418 -2.904 -1.235 -0.311 C5 IY0 5 IY0 C9 C6 C 0 1 Y N N 27.875 52.006 25.188 -1.337 0.542 -0.190 C9 IY0 6 IY0 C11 C7 C 0 1 Y N N 26.131 53.057 24.689 0.824 0.619 -0.594 C11 IY0 7 IY0 C12 C8 C 0 1 Y N N 26.178 51.985 23.869 0.439 1.879 -0.306 C12 IY0 8 IY0 C16 C9 C 0 1 N N N 25.165 54.068 24.925 2.225 0.184 -0.938 C16 IY0 9 IY0 N4 N1 N 0 1 N N N 28.938 51.882 26.019 -2.634 0.051 -0.023 N4 IY0 10 IY0 N6 N2 N 0 1 N N N 29.627 51.609 28.391 -4.131 -1.730 -0.162 N6 IY0 11 IY0 N7 N3 N 0 1 N N N 31.666 51.515 29.029 -6.385 -1.489 0.432 N7 IY0 12 IY0 O8 O1 O 0 1 N N N 27.555 51.716 27.846 -2.010 -1.960 -0.716 O8 IY0 13 IY0 O10 O2 O 0 1 Y N N 27.141 52.990 25.451 -0.255 -0.186 -0.522 O10 IY0 14 IY0 O14 O3 O 0 1 N N N 27.737 50.198 23.638 -1.753 2.888 0.283 O14 IY0 15 IY0 O15 O4 O 0 1 N N N 25.368 51.652 22.919 1.235 2.983 -0.274 O15 IY0 16 IY0 O17 O5 O 0 1 N N N 24.881 53.878 26.223 2.919 -0.176 0.258 O17 IY0 17 IY0 O19 O6 O 0 1 N N N 22.863 52.184 26.303 5.304 0.305 -0.416 O19 IY0 18 IY0 O20 O7 O 0 1 N N N 23.243 53.795 28.093 4.942 -0.876 1.785 O20 IY0 19 IY0 O21 O8 O 0 1 N N N 24.752 51.910 27.856 4.540 -2.099 -0.507 O21 IY0 20 IY0 P18 P1 P 0 1 N N N 23.797 52.786 27.231 4.445 -0.689 0.265 P18 IY0 21 IY0 H1 H1 H 0 1 N N N 32.218 51.835 26.352 -5.669 1.023 0.945 H1 IY0 22 IY0 H2 H2 H 0 1 N N N 30.493 52.021 24.589 -3.403 1.909 0.661 H2 IY0 23 IY0 H3 H3 H 0 1 N N N 25.583 55.070 24.749 2.184 -0.676 -1.607 H3 IY0 24 IY0 H4 H4 H 0 1 N N N 24.274 53.926 24.295 2.749 1.003 -1.431 H4 IY0 25 IY0 H5 H5 H 0 1 N N N 31.319 51.416 29.962 -6.553 -2.421 0.221 H5 IY0 26 IY0 H6 H6 H 0 1 N N N 32.652 51.522 28.860 -7.108 -0.927 0.753 H6 IY0 27 IY0 H7 H7 H 0 1 N N N 28.530 49.915 24.078 -1.823 3.049 1.234 H7 IY0 28 IY0 H8 H8 H 0 1 N N N 24.667 52.290 22.862 1.631 3.158 0.591 H8 IY0 29 IY0 H9 H9 H 0 1 N N N 22.319 53.903 27.902 5.854 -1.184 1.866 H9 IY0 30 IY0 H10 H10 H 0 1 N N N 24.617 51.022 27.548 4.001 -2.800 -0.114 H10 IY0 31 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal IY0 O15 C12 SING N N 1 IY0 O14 C13 SING N N 2 IY0 C12 C13 SING Y N 3 IY0 C12 C11 DOUB Y N 4 IY0 C13 C9 DOUB Y N 5 IY0 C11 C16 SING N N 6 IY0 C11 O10 SING Y N 7 IY0 C16 O17 SING N N 8 IY0 C9 O10 SING Y N 9 IY0 C9 N4 SING N N 10 IY0 C3 N4 SING N N 11 IY0 C3 C2 DOUB N N 12 IY0 N4 C5 SING N N 13 IY0 O17 P18 SING N N 14 IY0 O19 P18 DOUB N N 15 IY0 C2 C1 SING N N 16 IY0 P18 O21 SING N N 17 IY0 P18 O20 SING N N 18 IY0 C5 O8 DOUB N N 19 IY0 C5 N6 SING N N 20 IY0 C1 N6 DOUB N N 21 IY0 C1 N7 SING N N 22 IY0 C2 H1 SING N N 23 IY0 C3 H2 SING N N 24 IY0 C16 H3 SING N N 25 IY0 C16 H4 SING N N 26 IY0 N7 H5 SING N N 27 IY0 N7 H6 SING N N 28 IY0 O14 H7 SING N N 29 IY0 O15 H8 SING N N 30 IY0 O20 H9 SING N N 31 IY0 O21 H10 SING N N 32 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor IY0 InChI InChI 1.06 "InChI=1S/C9H10N3O8P/c10-5-1-2-12(9(15)11-5)8-7(14)6(13)4(20-8)3-19-21(16,17)18/h1-2,13-14H,3H2,(H2,10,11,15)(H2,16,17,18)" IY0 InChIKey InChI 1.06 KCVPKYRTVHKUFJ-UHFFFAOYSA-N IY0 SMILES_CANONICAL CACTVS 3.385 "NC1=NC(=O)N(C=C1)c2oc(CO[P](O)(O)=O)c(O)c2O" IY0 SMILES CACTVS 3.385 "NC1=NC(=O)N(C=C1)c2oc(CO[P](O)(O)=O)c(O)c2O" IY0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1=CN(C(=O)N=C1N)c2c(c(c(o2)COP(=O)(O)O)O)O" IY0 SMILES "OpenEye OEToolkits" 2.0.7 "C1=CN(C(=O)N=C1N)c2c(c(c(o2)COP(=O)(O)O)O)O" # _pdbx_chem_comp_identifier.comp_id IY0 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)furan-2-yl]methyl dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site IY0 "Create component" 2022-08-02 PDBJ IY0 "Initial release" 2023-08-02 RCSB #