data_IYV # _chem_comp.id IYV _chem_comp.name "(2R,3R,4S,5R,6R)-2-[(1R,2R)-1-azanyl-2-oxidanyl-propyl]-6-methylsulfanyl-oxane-3,4,5-triol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C9 H19 N O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-08-04 _chem_comp.pdbx_modified_date 2023-07-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 253.316 _chem_comp.one_letter_code ? _chem_comp.three_letter_code IYV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7YN2 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal IYV CAA C1 C 0 1 N N R -28.057 -8.440 32.816 -0.334 1.617 -0.337 CAA IYV 1 IYV CAB C2 C 0 1 N N S -29.449 -9.039 32.438 -1.788 1.151 -0.462 CAB IYV 2 IYV CAC C3 C 0 1 N N R -30.635 -8.203 33.026 -2.120 0.228 0.715 CAC IYV 3 IYV CAD C4 C 0 1 N N R -30.437 -7.997 34.565 -1.133 -0.943 0.730 CAD IYV 4 IYV CAF C5 C 0 1 N N R -28.075 -8.287 34.420 0.583 0.392 -0.282 CAF IYV 5 IYV CAG C6 C 0 1 N N R -26.715 -8.028 35.170 2.032 0.848 -0.097 CAG IYV 6 IYV CAH C7 C 0 1 N N R -26.114 -6.670 34.860 2.948 -0.376 -0.042 CAH IYV 7 IYV CAI C8 C 0 1 N N N -25.484 -6.072 36.133 4.397 0.079 0.142 CAI IYV 8 IYV CAM C9 C 0 1 N N N -32.254 -9.579 35.937 -0.319 -3.385 -0.466 CAM IYV 9 IYV NAO N1 N 0 1 N N N -26.823 -8.174 36.653 2.424 1.703 -1.226 NAO IYV 10 IYV OAE O1 O 0 1 N N N -29.145 -7.342 34.819 0.201 -0.439 0.816 OAE IYV 11 IYV OAJ O2 O 0 1 N N N -31.936 -8.845 32.775 -3.451 -0.270 0.571 OAJ IYV 12 IYV OAL O3 O 0 1 N N N -27.776 -7.200 32.045 -0.178 2.384 0.858 OAL IYV 13 IYV OAN O4 O 0 1 N N N -29.573 -9.261 31.006 -2.657 2.285 -0.440 OAN IYV 14 IYV OAP O5 O 0 1 N N N -25.120 -6.855 33.848 2.567 -1.208 1.055 OAP IYV 15 IYV SAK S1 S 0 1 N N N -30.492 -9.437 35.659 -1.318 -1.908 -0.795 SAK IYV 16 IYV H1 H1 H 0 1 N N N -27.291 -9.190 32.569 -0.073 2.229 -1.200 H1 IYV 17 IYV H2 H2 H 0 1 N N N -29.500 -10.023 32.927 -1.918 0.608 -1.398 H2 IYV 18 IYV H3 H3 H 0 1 N N N -30.623 -7.213 32.547 -2.037 0.785 1.649 H3 IYV 19 IYV H4 H4 H 0 1 N N N -31.243 -7.337 34.918 -1.338 -1.579 1.590 H4 IYV 20 IYV H5 H5 H 0 1 N N N -28.405 -9.272 34.781 0.494 -0.171 -1.212 H5 IYV 21 IYV H6 H6 H 0 1 N N N -26.007 -8.789 34.811 2.120 1.410 0.832 H6 IYV 22 IYV H7 H7 H 0 1 N N N -26.906 -5.996 34.503 2.860 -0.938 -0.972 H7 IYV 23 IYV H8 H8 H 0 1 N N N -26.262 -5.937 36.899 5.050 -0.793 0.182 H8 IYV 24 IYV H9 H9 H 0 1 N N N -24.709 -6.754 36.514 4.688 0.714 -0.695 H9 IYV 25 IYV H10 H10 H 0 1 N N N -25.031 -5.098 35.895 4.485 0.641 1.072 H10 IYV 26 IYV H11 H11 H 0 1 N N N -32.453 -10.433 36.602 0.714 -3.091 -0.279 H11 IYV 27 IYV H12 H12 H 0 1 N N N -32.627 -8.656 36.404 -0.713 -3.904 0.408 H12 IYV 28 IYV H13 H13 H 0 1 N N N -32.765 -9.736 34.976 -0.357 -4.049 -1.330 H13 IYV 29 IYV H14 H14 H 0 1 N N N -25.932 -7.998 37.071 2.351 1.204 -2.100 H14 IYV 30 IYV H15 H15 H 0 1 N N N -27.491 -7.518 37.005 1.876 2.549 -1.245 H15 IYV 31 IYV H17 H17 H 0 1 N N N -32.630 -8.311 33.145 -3.729 -0.863 1.283 H17 IYV 32 IYV H18 H18 H 0 1 N N N -26.925 -6.858 32.294 -0.731 3.177 0.891 H18 IYV 33 IYV H19 H19 H 0 1 N N N -30.430 -9.625 30.814 -3.595 2.063 -0.515 H19 IYV 34 IYV H20 H20 H 0 1 N N N -24.726 -6.018 33.634 3.106 -2.005 1.151 H20 IYV 35 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal IYV OAN CAB SING N N 1 IYV OAL CAA SING N N 2 IYV CAB CAA SING N N 3 IYV CAB CAC SING N N 4 IYV OAJ CAC SING N N 5 IYV CAA CAF SING N N 6 IYV CAC CAD SING N N 7 IYV OAP CAH SING N N 8 IYV CAF OAE SING N N 9 IYV CAF CAG SING N N 10 IYV CAD OAE SING N N 11 IYV CAD SAK SING N N 12 IYV CAH CAG SING N N 13 IYV CAH CAI SING N N 14 IYV CAG NAO SING N N 15 IYV SAK CAM SING N N 16 IYV CAA H1 SING N N 17 IYV CAB H2 SING N N 18 IYV CAC H3 SING N N 19 IYV CAD H4 SING N N 20 IYV CAF H5 SING N N 21 IYV CAG H6 SING N N 22 IYV CAH H7 SING N N 23 IYV CAI H8 SING N N 24 IYV CAI H9 SING N N 25 IYV CAI H10 SING N N 26 IYV CAM H11 SING N N 27 IYV CAM H12 SING N N 28 IYV CAM H13 SING N N 29 IYV NAO H14 SING N N 30 IYV NAO H15 SING N N 31 IYV OAJ H17 SING N N 32 IYV OAL H18 SING N N 33 IYV OAN H19 SING N N 34 IYV OAP H20 SING N N 35 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor IYV InChI InChI 1.06 "InChI=1S/C9H19NO5S/c1-3(11)4(10)8-6(13)5(12)7(14)9(15-8)16-2/h3-9,11-14H,10H2,1-2H3/t3-,4-,5+,6-,7-,8-,9-/m1/s1" IYV InChIKey InChI 1.06 AEEIMWYSDWZKAT-HJTGYUAHSA-N IYV SMILES_CANONICAL CACTVS 3.385 "CS[C@H]1O[C@H]([C@H](N)[C@@H](C)O)[C@H](O)[C@H](O)[C@H]1O" IYV SMILES CACTVS 3.385 "CS[CH]1O[CH]([CH](N)[CH](C)O)[CH](O)[CH](O)[CH]1O" IYV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]([C@H]([C@@H]1[C@@H]([C@@H]([C@H]([C@H](O1)SC)O)O)O)N)O" IYV SMILES "OpenEye OEToolkits" 2.0.7 "CC(C(C1C(C(C(C(O1)SC)O)O)O)N)O" # _pdbx_chem_comp_identifier.comp_id IYV _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R},3~{R},4~{S},5~{R},6~{R})-2-[(1~{R},2~{R})-1-azanyl-2-oxidanyl-propyl]-6-methylsulfanyl-oxane-3,4,5-triol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site IYV "Create component" 2022-08-04 PDBJ IYV "Initial release" 2023-08-02 RCSB #