data_IZY # _chem_comp.id IZY _chem_comp.name "[(2~{S},3~{S},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl] [(3~{S},6~{Z},10~{E},14~{E})-3,7,11,15,19-pentamethylicosa-6,10,14,18-tetraenyl] hydrogen phosphate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C31 H55 O9 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-04-22 _chem_comp.pdbx_modified_date 2023-01-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 602.737 _chem_comp.one_letter_code ? _chem_comp.three_letter_code IZY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7ZLI _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal IZY C10 C1 C 0 1 N N N 117.184 129.652 135.814 5.712 -0.541 -0.739 C10 IZY 1 IZY C13 C2 C 0 1 N N N 115.860 132.467 135.883 4.954 2.348 -2.227 C13 IZY 2 IZY C15 C3 C 0 1 N N N 118.861 134.150 137.033 5.356 4.018 0.010 C15 IZY 3 IZY C17 C4 C 0 1 N N N 117.570 136.359 137.472 3.806 5.468 1.291 C17 IZY 4 IZY C20 C5 C 0 1 N N N 118.991 138.434 137.082 1.991 4.560 -0.067 C20 IZY 5 IZY C21 C6 C 0 1 N N N 118.367 139.235 135.912 0.632 4.205 0.540 C21 IZY 6 IZY C22 C7 C 0 1 N N S 119.331 139.522 134.756 -0.018 3.091 -0.282 C22 IZY 7 IZY C24 C8 C 0 1 N N N 120.670 140.035 135.281 -1.318 2.650 0.394 C24 IZY 8 IZY C01 C9 C 0 1 N N N 116.581 123.348 131.804 11.341 -3.424 -0.533 C01 IZY 9 IZY C02 C10 C 0 1 N N N 117.570 124.040 130.777 10.829 -4.730 0.019 C02 IZY 10 IZY C03 C11 C 0 1 N N N 117.598 122.718 129.954 11.642 -5.988 -0.145 C03 IZY 11 IZY C04 C12 C 0 1 N N N 117.788 125.310 131.206 9.677 -4.771 0.641 C04 IZY 12 IZY C05 C13 C 0 1 N N N 117.688 126.566 132.101 8.809 -3.540 0.703 C05 IZY 13 IZY C06 C14 C 0 1 N N N 117.753 126.197 133.605 7.426 -3.862 0.135 C06 IZY 14 IZY C07 C15 C 0 1 N N N 118.229 127.466 134.327 6.559 -2.631 0.198 C07 IZY 15 IZY C08 C16 C 0 1 N N N 119.762 127.538 134.125 5.805 -2.304 1.461 C08 IZY 16 IZY C09 C17 C 0 1 N N N 117.452 128.347 134.980 6.461 -1.845 -0.846 C09 IZY 17 IZY C11 C18 C 0 1 N N N 117.495 130.882 134.923 6.610 0.603 -1.214 C11 IZY 18 IZY C12 C19 C 0 1 N N N 117.347 132.173 135.747 5.862 1.907 -1.108 C12 IZY 19 IZY C14 C20 C 0 1 N N N 118.328 132.916 136.247 6.001 2.657 -0.042 C14 IZY 20 IZY C16 C21 C 0 1 N N N 118.267 135.460 136.399 4.450 4.106 1.239 C16 IZY 21 IZY C18 C22 C 0 1 N N N 116.447 135.508 138.122 4.513 6.610 1.974 C18 IZY 22 IZY C19 C23 C 0 1 N N N 117.851 137.641 137.786 2.631 5.658 0.743 C19 IZY 23 IZY C23 C24 C 0 1 N N N 119.572 138.229 133.977 -0.326 3.608 -1.689 C23 IZY 24 IZY C25 C25 C 0 1 N N N 120.483 141.308 136.141 -1.903 1.453 -0.358 C25 IZY 25 IZY C31 C26 C 0 1 N N S 121.126 144.764 137.418 -6.405 -1.220 0.321 C31 IZY 26 IZY C33 C27 C 0 1 N N R 120.207 143.830 139.481 -8.413 -1.480 -0.963 C33 IZY 27 IZY C34 C28 C 0 1 N N N 119.323 142.700 139.922 -9.325 -0.748 -1.950 C34 IZY 28 IZY C36 C29 C 0 1 N N S 119.443 145.130 139.747 -9.216 -1.869 0.281 C36 IZY 29 IZY C38 C30 C 0 1 N N S 119.843 146.278 138.888 -8.283 -2.548 1.289 C38 IZY 30 IZY C40 C31 C 0 1 N N S 120.135 145.901 137.503 -7.127 -1.599 1.617 C40 IZY 31 IZY O26 O1 O 0 1 N N N 121.756 141.819 136.457 -3.117 1.041 0.274 O26 IZY 32 IZY O28 O2 O 0 1 N N N 123.707 143.409 135.852 -4.344 0.015 -1.679 O28 IZY 33 IZY O29 O3 O 0 1 N N N 121.970 142.932 134.154 -3.169 -1.562 -0.095 O29 IZY 34 IZY O30 O4 O 0 1 N N N 121.370 144.516 136.096 -5.359 -0.290 0.612 O30 IZY 35 IZY O32 O5 O 0 1 N N N 120.538 143.576 138.080 -7.335 -0.622 -0.584 O32 IZY 36 IZY O35 O6 O 0 1 N N N 119.957 141.505 139.540 -8.607 -0.488 -3.158 O35 IZY 37 IZY O37 O7 O 0 1 N N N 119.691 145.493 141.115 -10.259 -2.773 -0.088 O37 IZY 38 IZY O39 O8 O 0 1 N N N 118.717 147.208 138.851 -9.008 -2.849 2.483 O39 IZY 39 IZY O41 O9 O 0 1 N N N 118.910 145.460 136.885 -7.639 -0.419 2.240 O41 IZY 40 IZY P27 P1 P 0 1 N N N 122.232 143.172 135.623 -4.005 -0.194 -0.253 P27 IZY 41 IZY H101 H1 H 0 0 N N N 116.131 129.680 136.130 4.818 -0.583 -1.362 H101 IZY 42 IZY H102 H2 H 0 0 N N N 117.833 129.664 136.702 5.425 -0.371 0.298 H102 IZY 43 IZY H132 H3 H 0 0 N N N 115.720 133.387 136.469 4.906 1.566 -2.985 H132 IZY 44 IZY H133 H4 H 0 0 N N N 115.419 132.598 134.884 3.955 2.534 -1.832 H133 IZY 45 IZY H131 H5 H 0 0 N N N 115.366 131.628 136.394 5.345 3.263 -2.672 H131 IZY 46 IZY H152 H6 H 0 0 N N N 118.552 134.078 138.086 6.130 4.784 0.073 H152 IZY 47 IZY H151 H7 H 0 0 N N N 119.959 134.178 136.974 4.763 4.174 -0.891 H151 IZY 48 IZY H201 H8 H 0 0 N N N 119.747 137.735 136.694 2.634 3.680 -0.058 H201 IZY 49 IZY H202 H9 H 0 0 N N N 119.462 139.124 137.797 1.853 4.899 -1.093 H202 IZY 50 IZY H211 H10 H 0 0 N N N 117.517 138.660 135.516 0.770 3.866 1.567 H211 IZY 51 IZY H212 H11 H 0 0 N N N 118.007 140.197 136.307 -0.011 5.086 0.531 H212 IZY 52 IZY H221 H12 H 0 0 N N N 118.887 140.275 134.088 0.663 2.243 -0.348 H221 IZY 53 IZY H241 H13 H 0 0 N N N 121.138 139.252 135.896 -1.112 2.365 1.426 H241 IZY 54 IZY H242 H14 H 0 0 N N N 121.323 140.271 134.428 -2.032 3.473 0.380 H242 IZY 55 IZY H012 H15 H 0 0 N N N 116.322 124.060 132.601 12.287 -3.593 -1.047 H012 IZY 56 IZY H013 H16 H 0 0 N N N 115.666 123.037 131.279 10.614 -3.016 -1.234 H013 IZY 57 IZY H011 H17 H 0 0 N N N 117.068 122.466 132.245 11.493 -2.719 0.285 H011 IZY 58 IZY H031 H19 H 0 0 N N N 118.252 122.844 129.079 12.313 -6.101 0.707 H031 IZY 59 IZY H033 H20 H 0 0 N N N 117.982 121.902 130.584 10.975 -6.848 -0.199 H033 IZY 60 IZY H032 H21 H 0 0 N N N 116.579 122.474 129.618 12.228 -5.925 -1.062 H032 IZY 61 IZY H2 H22 H 0 1 N N N 118.450 125.670 130.432 9.348 -5.688 1.108 H2 IZY 62 IZY H052 H24 H 0 0 N N N 118.522 127.243 131.862 8.710 -3.218 1.740 H052 IZY 63 IZY H051 H25 H 0 0 N N N 116.734 127.074 131.898 9.267 -2.743 0.117 H051 IZY 64 IZY H062 H26 H 0 0 N N N 116.759 125.899 133.970 7.525 -4.184 -0.902 H062 IZY 65 IZY H061 H27 H 0 0 N N N 118.465 125.374 133.767 6.968 -4.659 0.721 H061 IZY 66 IZY H083 H29 H 0 0 N N N 120.157 128.434 134.626 6.455 -1.752 2.139 H083 IZY 67 IZY H082 H30 H 0 0 N N N 120.231 126.641 134.556 4.934 -1.696 1.217 H082 IZY 68 IZY H081 H31 H 0 0 N N N 119.988 127.589 133.050 5.480 -3.228 1.939 H081 IZY 69 IZY H4 H32 H 0 1 N N N 116.464 127.924 134.872 6.916 -2.131 -1.782 H4 IZY 70 IZY H112 H34 H 0 0 N N N 118.525 130.807 134.543 7.504 0.645 -0.592 H112 IZY 71 IZY H111 H35 H 0 0 N N N 116.793 130.907 134.076 6.898 0.433 -2.252 H111 IZY 72 IZY H6 H37 H 0 1 N N N 119.225 132.389 135.957 6.576 2.299 0.798 H6 IZY 73 IZY H161 H39 H 0 0 N N N 119.083 136.031 135.931 3.677 3.341 1.176 H161 IZY 74 IZY H162 H40 H 0 0 N N N 117.528 135.182 135.633 5.043 3.950 2.140 H162 IZY 75 IZY H183 H41 H 0 0 N N N 115.929 136.106 138.886 5.138 7.135 1.251 H183 IZY 76 IZY H181 H42 H 0 0 N N N 115.728 135.198 137.349 3.776 7.300 2.385 H181 IZY 77 IZY H182 H43 H 0 0 N N N 116.888 134.616 138.591 5.136 6.222 2.780 H182 IZY 78 IZY H191 H44 H 0 0 N N N 117.267 138.132 138.550 2.122 6.602 0.872 H191 IZY 79 IZY H233 H45 H 0 0 N N N 120.263 138.425 133.144 -1.007 4.456 -1.623 H233 IZY 80 IZY H232 H46 H 0 0 N N N 120.010 137.474 134.647 0.600 3.922 -2.171 H232 IZY 81 IZY H231 H47 H 0 0 N N N 118.616 137.857 133.580 -0.789 2.814 -2.275 H231 IZY 82 IZY H252 H48 H 0 0 N N N 119.911 142.058 135.575 -2.110 1.738 -1.390 H252 IZY 83 IZY H251 H49 H 0 0 N N N 119.943 141.056 137.066 -1.189 0.630 -0.344 H251 IZY 84 IZY H311 H50 H 0 0 N N N 122.049 145.054 137.942 -5.979 -2.115 -0.133 H311 IZY 85 IZY H331 H51 H 0 0 N N N 121.126 143.828 140.086 -8.014 -2.379 -1.434 H331 IZY 86 IZY H342 H52 H 0 0 N N N 119.194 142.726 141.014 -10.194 -1.368 -2.170 H342 IZY 87 IZY H341 H53 H 0 0 N N N 118.340 142.778 139.435 -9.652 0.194 -1.512 H341 IZY 88 IZY H361 H54 H 0 0 N N N 118.370 144.936 139.605 -9.649 -0.975 0.729 H361 IZY 89 IZY H381 H55 H 0 0 N N N 120.720 146.775 139.329 -7.889 -3.468 0.859 H381 IZY 90 IZY H401 H56 H 0 0 N N N 120.538 146.769 136.961 -6.428 -2.094 2.291 H401 IZY 91 IZY H7 H57 H 0 1 N N N 122.788 142.979 133.674 -2.912 -1.763 0.815 H7 IZY 92 IZY H351 H58 H 0 0 N N N 119.424 140.765 139.804 -9.125 -0.025 -3.831 H351 IZY 93 IZY H371 H59 H 0 0 N N N 119.231 146.299 141.318 -10.809 -3.062 0.653 H371 IZY 94 IZY H391 H60 H 0 0 N N N 118.941 147.955 138.309 -8.478 -3.280 3.167 H391 IZY 95 IZY H411 H61 H 0 0 N N N 118.266 146.157 136.924 -6.960 0.230 2.471 H411 IZY 96 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal IZY C10 C09 SING N N 1 IZY C10 C11 SING N N 2 IZY C13 C12 SING N N 3 IZY C15 C14 SING N N 4 IZY C15 C16 SING N N 5 IZY C17 C16 SING N N 6 IZY C17 C18 SING N N 7 IZY C17 C19 DOUB N Z 8 IZY C20 C21 SING N N 9 IZY C20 C19 SING N N 10 IZY C21 C22 SING N N 11 IZY C22 C24 SING N N 12 IZY C22 C23 SING N N 13 IZY C24 C25 SING N N 14 IZY C01 C02 SING N N 15 IZY C02 C03 SING N N 16 IZY C02 C04 DOUB N N 17 IZY C04 C05 SING N N 18 IZY C05 C06 SING N N 19 IZY C06 C07 SING N N 20 IZY C07 C08 SING N N 21 IZY C07 C09 DOUB N E 22 IZY C11 C12 SING N N 23 IZY C12 C14 DOUB N E 24 IZY C25 O26 SING N N 25 IZY C31 C40 SING N N 26 IZY C31 O30 SING N N 27 IZY C31 O32 SING N N 28 IZY C33 C34 SING N N 29 IZY C33 C36 SING N N 30 IZY C33 O32 SING N N 31 IZY C34 O35 SING N N 32 IZY C36 C38 SING N N 33 IZY C36 O37 SING N N 34 IZY C38 C40 SING N N 35 IZY C38 O39 SING N N 36 IZY C40 O41 SING N N 37 IZY O26 P27 SING N N 38 IZY O28 P27 DOUB N N 39 IZY O29 P27 SING N N 40 IZY O30 P27 SING N N 41 IZY C10 H101 SING N N 42 IZY C10 H102 SING N N 43 IZY C13 H132 SING N N 44 IZY C13 H133 SING N N 45 IZY C13 H131 SING N N 46 IZY C15 H152 SING N N 47 IZY C15 H151 SING N N 48 IZY C20 H201 SING N N 49 IZY C20 H202 SING N N 50 IZY C21 H211 SING N N 51 IZY C21 H212 SING N N 52 IZY C22 H221 SING N N 53 IZY C24 H241 SING N N 54 IZY C24 H242 SING N N 55 IZY C01 H012 SING N N 56 IZY C01 H013 SING N N 57 IZY C01 H011 SING N N 58 IZY C03 H031 SING N N 59 IZY C03 H033 SING N N 60 IZY C03 H032 SING N N 61 IZY C04 H2 SING N N 62 IZY C05 H052 SING N N 63 IZY C05 H051 SING N N 64 IZY C06 H062 SING N N 65 IZY C06 H061 SING N N 66 IZY C08 H083 SING N N 67 IZY C08 H082 SING N N 68 IZY C08 H081 SING N N 69 IZY C09 H4 SING N N 70 IZY C11 H112 SING N N 71 IZY C11 H111 SING N N 72 IZY C14 H6 SING N N 73 IZY C16 H161 SING N N 74 IZY C16 H162 SING N N 75 IZY C18 H183 SING N N 76 IZY C18 H181 SING N N 77 IZY C18 H182 SING N N 78 IZY C19 H191 SING N N 79 IZY C23 H233 SING N N 80 IZY C23 H232 SING N N 81 IZY C23 H231 SING N N 82 IZY C25 H252 SING N N 83 IZY C25 H251 SING N N 84 IZY C31 H311 SING N N 85 IZY C33 H331 SING N N 86 IZY C34 H342 SING N N 87 IZY C34 H341 SING N N 88 IZY C36 H361 SING N N 89 IZY C38 H381 SING N N 90 IZY C40 H401 SING N N 91 IZY O29 H7 SING N N 92 IZY O35 H351 SING N N 93 IZY O37 H371 SING N N 94 IZY O39 H391 SING N N 95 IZY O41 H411 SING N N 96 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor IZY InChI InChI 1.06 "InChI=1S/C31H55O9P/c1-22(2)11-7-12-23(3)13-8-14-24(4)15-9-16-25(5)17-10-18-26(6)19-20-38-41(36,37)40-31-30(35)29(34)28(33)27(21-32)39-31/h11,13,15,17,26-35H,7-10,12,14,16,18-21H2,1-6H3,(H,36,37)/b23-13+,24-15+,25-17-/t26-,27+,28+,29-,30-,31-/m0/s1" IZY InChIKey InChI 1.06 AGLXCEGQRIYVRV-YNCWARPRSA-N IZY SMILES_CANONICAL CACTVS 3.385 "C[C@H](CCO[P](O)(=O)O[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]1O)CC\C=C(C)/CC\C=C(/C)CC/C=C(C)/CCC=C(C)C" IZY SMILES CACTVS 3.385 "C[CH](CCO[P](O)(=O)O[CH]1O[CH](CO)[CH](O)[CH](O)[CH]1O)CCC=C(C)CCC=C(C)CCC=C(C)CCC=C(C)C" IZY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](CC/C=C(/C)\CC/C=C(\C)/CC/C=C(\C)/CCC=C(C)C)CCOP(=O)(O)O[C@H]1[C@H]([C@H]([C@@H]([C@H](O1)CO)O)O)O" IZY SMILES "OpenEye OEToolkits" 2.0.7 "CC(CCC=C(C)CCC=C(C)CCC=C(C)CCC=C(C)C)CCOP(=O)(O)OC1C(C(C(C(O1)CO)O)O)O" # _pdbx_chem_comp_identifier.comp_id IZY _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(2~{S},3~{S},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl] [(3~{S},6~{Z},10~{E},14~{E})-3,7,11,15,19-pentamethylicosa-6,10,14,18-tetraenyl] hydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site IZY "Create component" 2022-04-22 PDBE IZY "Modify descriptor" 2022-08-22 RCSB IZY "Initial release" 2023-01-11 RCSB #