data_J00 # _chem_comp.id J00 _chem_comp.name "2-[(3S)-1-oxidanyl-3H-2,1-benzoxaborol-3-yl]prop-2-enoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H9 B O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(S)-2-(1-hydroxy-1,3-dihydrobenzo[c][1,2]oxaborol-3-yl)acrylic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-03-08 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 203.987 _chem_comp.one_letter_code ? _chem_comp.three_letter_code J00 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7E9A _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal J00 C1 C1 C 0 1 Y N N N N N 90.934 1.904 220.170 3.006 1.265 -0.692 C1 J00 1 J00 C2 C2 C 0 1 Y N N N N N 90.234 1.784 219.008 2.205 2.254 -0.149 C2 J00 2 J00 C3 C3 C 0 1 Y N N N N N 90.629 2.431 217.855 1.027 1.924 0.500 C3 J00 3 J00 C4 C4 C 0 1 Y N N N N N 91.770 3.258 217.858 0.644 0.603 0.608 C4 J00 4 J00 C5 C5 C 0 1 Y N N N N N 92.457 3.347 218.995 1.450 -0.396 0.061 C5 J00 5 J00 C6 C6 C 0 1 Y N N N N N 92.047 2.689 220.177 2.632 -0.061 -0.590 C6 J00 6 J00 B7 B1 B 0 1 N N N N N N 93.624 4.330 218.767 0.739 -1.765 0.353 B7 J00 7 J00 O8 O1 O 0 1 N N N N N N 93.635 4.621 217.381 -0.456 -1.472 1.064 O8 J00 8 J00 C9 C7 C 0 1 N N S N N N 92.470 4.067 216.755 -0.551 -0.059 1.238 C9 J00 9 J00 C10 C8 C 0 1 N N N N N N 91.753 5.181 216.087 -1.810 0.445 0.581 C10 J00 10 J00 C11 C9 C 0 1 N N N N N N 90.460 5.403 216.206 -2.677 1.177 1.277 C11 J00 11 J00 C12 C10 C 0 1 N N N N N N 92.595 6.095 215.196 -2.081 0.129 -0.828 C12 J00 12 J00 O13 O2 O 0 1 N N N N N N 92.427 7.337 215.189 -1.203 -0.612 -1.533 O13 J00 13 J00 O14 O3 O 0 1 N N N N N N 93.472 5.588 214.455 -3.096 0.535 -1.358 O14 J00 14 J00 O15 O4 O 0 1 N N N N N N 93.999 5.455 219.438 1.203 -3.054 -0.023 O15 J00 15 J00 H1 H1 H 0 1 N N N N N N 90.614 1.389 221.064 3.921 1.530 -1.200 H1 J00 16 J00 H2 H2 H 0 1 N N N N N N 89.348 1.167 218.988 2.501 3.289 -0.230 H2 J00 17 J00 H3 H3 H 0 1 N N N N N N 90.061 2.303 216.946 0.408 2.702 0.922 H3 J00 18 J00 H4 H4 H 0 1 N N N N N N 92.617 2.809 221.087 3.253 -0.834 -1.017 H4 J00 19 J00 H5 H5 H 0 1 N N N N N N 92.791 3.356 215.980 -0.578 0.175 2.302 H5 J00 20 J00 H6 H6 H 0 1 N N N N N N 89.855 4.753 216.820 -3.579 1.538 0.806 H6 J00 21 J00 H7 H7 H 0 1 N N N N N N 90.005 6.235 215.689 -2.478 1.410 2.313 H7 J00 22 J00 H8 H8 H 0 1 N N N N N N 93.035 7.736 214.578 -1.424 -0.794 -2.457 H8 J00 23 J00 H9 H9 H 0 1 N N N N N N 94.174 6.152 218.816 0.621 -3.776 0.250 H9 J00 24 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal J00 O14 C12 DOUB N N 1 J00 O13 C12 SING N N 2 J00 C12 C10 SING N N 3 J00 C10 C11 DOUB N N 4 J00 C10 C9 SING N N 5 J00 C9 O8 SING N N 6 J00 C9 C4 SING N N 7 J00 O8 B7 SING N N 8 J00 C3 C4 DOUB Y N 9 J00 C3 C2 SING Y N 10 J00 C4 C5 SING Y N 11 J00 B7 C5 SING N N 12 J00 B7 O15 SING N N 13 J00 C5 C6 DOUB Y N 14 J00 C2 C1 DOUB Y N 15 J00 C1 C6 SING Y N 16 J00 C1 H1 SING N N 17 J00 C2 H2 SING N N 18 J00 C3 H3 SING N N 19 J00 C6 H4 SING N N 20 J00 C9 H5 SING N N 21 J00 C11 H6 SING N N 22 J00 C11 H7 SING N N 23 J00 O13 H8 SING N N 24 J00 O15 H9 SING N N 25 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor J00 InChI InChI 1.03 "InChI=1S/C10H9BO4/c1-6(10(12)13)9-7-4-2-3-5-8(7)11(14)15-9/h2-5,9,14H,1H2,(H,12,13)/t9-/m1/s1" J00 InChIKey InChI 1.03 BRBGRVSFRVLGNY-SECBINFHSA-N J00 SMILES_CANONICAL CACTVS 3.385 "OB1O[C@H](C(=C)C(O)=O)c2ccccc12" J00 SMILES CACTVS 3.385 "OB1O[CH](C(=C)C(O)=O)c2ccccc12" J00 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "B1(c2ccccc2[C@H](O1)C(=C)C(=O)O)O" J00 SMILES "OpenEye OEToolkits" 2.0.7 "B1(c2ccccc2C(O1)C(=C)C(=O)O)O" # _pdbx_chem_comp_identifier.comp_id J00 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[(3~{S})-1-oxidanyl-3~{H}-2,1-benzoxaborol-3-yl]prop-2-enoic acid" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id J00 _pdbx_chem_comp_synonyms.name "(S)-2-(1-hydroxy-1,3-dihydrobenzo[c][1,2]oxaborol-3-yl)acrylic acid" _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site J00 "Create component" 2021-03-08 PDBJ J00 "Initial release" 2021-08-04 RCSB J00 "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id J00 _pdbx_chem_comp_pcm.modified_residue_id SER _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom B7 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom OG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #