data_J01 # _chem_comp.id J01 _chem_comp.name "(2R,3Z,5R)-3-(2-HYDROXYETHYLIDENE)-7-OXO-4-OXA-1-AZABICYCLO[3.2.0]HEPTANE-2-CARBOXYLIC ACID" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C8 H9 N O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "CLAVULANIC ACID" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2006-11-29 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 199.161 _chem_comp.one_letter_code ? _chem_comp.three_letter_code J01 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details "OpenEye/OEToolkits V1.4.2" _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal J01 O2 O2 O 0 1 N N N 29.638 -21.642 20.654 4.193 3.714 -1.975 O2 J01 1 J01 C5 C5 C 0 1 N N N 30.127 -20.625 21.115 3.433 3.701 -1.034 C5 J01 2 J01 C4 C4 C 0 1 N N N 31.429 -19.951 20.841 2.173 4.483 -0.620 C4 J01 3 J01 C3 C3 C 0 1 N N R 30.836 -18.898 21.783 2.020 3.421 0.483 C3 J01 4 J01 N1 N1 N 0 1 N N N 29.628 -19.709 22.057 3.297 2.860 0.034 N1 J01 5 J01 O1 O1 O 0 1 N N N 30.466 -17.710 21.079 0.993 2.407 0.357 O1 J01 6 J01 C1 C1 C 0 1 N N N 29.023 -17.745 20.981 1.714 1.230 0.080 C1 J01 7 J01 C2 C2 C 0 1 N N R 28.441 -18.963 21.605 3.206 1.427 -0.059 C2 J01 8 J01 C8 C8 C 0 1 N N N 27.556 -18.590 22.751 3.916 0.850 1.122 C8 J01 9 J01 O5 O5 O 0 1 N N N 26.376 -18.251 22.482 3.659 1.106 2.289 O5 J01 10 J01 O4 O4 O 0 1 N N N 28.042 -18.629 23.910 4.893 -0.001 0.724 O4 J01 11 J01 C6 C6 C 0 1 N N N 28.245 -16.814 20.410 1.079 0.066 -0.092 C6 J01 12 J01 C7 C7 C 0 1 N N N 28.733 -15.566 19.734 -0.397 -0.107 0.050 C7 J01 13 J01 O3 O3 O 0 1 N N N 30.100 -15.275 19.988 -0.923 -0.574 -1.184 O3 J01 14 J01 H4C1 1H4C H 0 0 N N N 31.802 -19.722 19.815 2.374 5.498 -0.270 H4C1 J01 15 J01 H4C2 2H4C H 0 0 N N N 32.421 -20.435 21.002 1.387 4.490 -1.380 H4C2 J01 16 J01 H3 H3 H 0 1 N N N 31.465 -18.528 22.626 2.073 3.815 1.504 H3 J01 17 J01 H2 H2 H 0 1 N N N 27.800 -19.558 20.913 3.604 1.057 -1.007 H2 J01 18 J01 H6 H6 H 0 1 N N N 27.178 -17.081 20.498 1.664 -0.815 -0.343 H6 J01 19 J01 H4 H4 H 0 1 N N N 27.480 -18.392 24.638 5.373 -0.389 1.486 H4 J01 20 J01 H7C1 1H7C H 0 0 N N N 28.089 -14.696 20.003 -0.900 0.829 0.312 H7C1 J01 21 J01 H7C2 2H7C H 0 0 N N N 28.538 -15.611 18.637 -0.610 -0.851 0.824 H7C2 J01 22 J01 HA HA H 0 1 N N N 30.409 -14.485 19.560 -0.183 -0.968 -1.674 HA J01 23 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal J01 O2 C5 DOUB N N 1 J01 C5 C4 SING N N 2 J01 C5 N1 SING N N 3 J01 C4 C3 SING N N 4 J01 C4 H4C1 SING N N 5 J01 C4 H4C2 SING N N 6 J01 C3 N1 SING N N 7 J01 C3 O1 SING N N 8 J01 C3 H3 SING N N 9 J01 N1 C2 SING N N 10 J01 O1 C1 SING N N 11 J01 C1 C2 SING N N 12 J01 C1 C6 DOUB N Z 13 J01 C2 C8 SING N N 14 J01 C2 H2 SING N N 15 J01 C8 O5 DOUB N N 16 J01 C8 O4 SING N N 17 J01 O4 H4 SING N N 18 J01 C6 C7 SING N N 19 J01 C6 H6 SING N N 20 J01 C7 O3 SING N N 21 J01 C7 H7C1 SING N N 22 J01 C7 H7C2 SING N N 23 J01 O3 HA SING N N 24 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor J01 SMILES ACDLabs 10.04 "O=C2N1C(C(/OC1C2)=C/CO)C(=O)O" J01 SMILES_CANONICAL CACTVS 3.341 "OC\C=C1/O[C@@H]2CC(=O)N2[C@H]1C(O)=O" J01 SMILES CACTVS 3.341 "OCC=C1O[CH]2CC(=O)N2[CH]1C(O)=O" J01 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C1[C@@H]2N(C1=O)[C@H](/C(=C/CO)/O2)C(=O)O" J01 SMILES "OpenEye OEToolkits" 1.5.0 "C1C2N(C1=O)C(C(=CCO)O2)C(=O)O" J01 InChI InChI 1.03 "InChI=1S/C8H9NO5/c10-2-1-4-7(8(12)13)9-5(11)3-6(9)14-4/h1,6-7,10H,2-3H2,(H,12,13)/b4-1-/t6-,7-/m1/s1" J01 InChIKey InChI 1.03 HZZVJAQRINQKSD-PBFISZAISA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier J01 "SYSTEMATIC NAME" ACDLabs 10.04 "(2R,3Z,5R)-3-(2-hydroxyethylidene)-7-oxo-4-oxa-1-azabicyclo[3.2.0]heptane-2-carboxylic acid" J01 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,3Z,5R)-3-(2-hydroxyethylidene)-7-oxo-4-oxa-1-azabicyclo[3.2.0]heptane-2-carboxylic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site J01 "Create component" 2006-11-29 EBI J01 "Modify descriptor" 2011-06-04 RCSB J01 "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id J01 _pdbx_chem_comp_synonyms.name "CLAVULANIC ACID" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##