data_J1O # _chem_comp.id J1O _chem_comp.name "4-[[(2R)-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]butanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H20 N O8 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-03-19 _chem_comp.pdbx_modified_date 2021-11-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 313.241 _chem_comp.one_letter_code ? _chem_comp.three_letter_code J1O _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7EDZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal J1O OAH O1 O 0 1 N N N 53.437 -6.170 25.202 -2.195 -2.702 0.841 OAH J1O 1 J1O PAT P1 P 0 1 N N N 53.505 -7.630 24.512 -3.355 -1.790 0.197 PAT J1O 2 J1O OAI O2 O 0 1 N N N 53.076 -8.604 25.654 -4.208 -2.666 -0.851 OAI J1O 3 J1O OAE O3 O 0 1 N N N 54.769 -7.738 23.780 -4.247 -1.297 1.269 OAE J1O 4 J1O OAO O4 O 0 1 N N N 52.197 -7.646 23.593 -2.691 -0.538 -0.567 OAO J1O 5 J1O CAM C1 C 0 1 N N N 52.075 -6.779 22.400 -1.957 0.486 0.109 CAM J1O 6 J1O CAS C2 C 0 1 N N N 50.627 -6.331 22.158 -1.467 1.518 -0.908 CAS J1O 7 J1O CAA C3 C 0 1 N N N 50.072 -5.619 23.462 -0.560 0.833 -1.933 CAA J1O 8 J1O CAB C4 C 0 1 N N N 49.740 -7.581 21.927 -2.668 2.139 -1.625 CAB J1O 9 J1O CAR C5 C 0 1 N N R 50.618 -5.532 20.872 -0.682 2.614 -0.185 CAR J1O 10 J1O OAG O5 O 0 1 N N N 51.344 -6.096 19.822 -1.561 3.342 0.675 OAG J1O 11 J1O CAQ C6 C 0 1 N N N 49.350 -4.983 20.526 0.417 1.988 0.634 CAQ J1O 12 J1O OAD O6 O 0 1 N N N 48.592 -5.617 19.799 0.366 2.022 1.845 OAD J1O 13 J1O NAN N1 N 0 1 N N N 49.019 -3.775 21.072 1.458 1.389 0.021 NAN J1O 14 J1O CAK C7 C 0 1 N N N 47.731 -3.176 20.888 2.476 0.696 0.814 CAK J1O 15 J1O CAJ C8 C 0 1 N N N 46.859 -3.640 22.091 3.537 0.109 -0.119 CAJ J1O 16 J1O CAL C9 C 0 1 N N N 45.434 -3.145 21.922 4.600 -0.614 0.710 CAL J1O 17 J1O CAP C10 C 0 1 N N N 44.761 -2.619 23.222 5.646 -1.192 -0.209 CAP J1O 18 J1O OAF O7 O 0 1 N N N 44.809 -1.357 23.290 5.550 -1.041 -1.404 OAF J1O 19 J1O OAC O8 O 0 1 N N N 44.194 -3.421 24.067 6.683 -1.875 0.300 OAC J1O 20 J1O H1 H1 H 0 1 N N N 54.226 -5.683 24.993 -1.572 -3.060 0.194 H1 J1O 21 J1O H2 H2 H 0 1 N N N 53.754 -9.256 25.786 -4.637 -3.439 -0.459 H2 J1O 22 J1O H3 H3 H 0 1 N N N 52.426 -7.336 21.519 -2.603 0.974 0.839 H3 J1O 23 J1O H4 H4 H 0 1 N N N 52.703 -5.887 22.544 -1.102 0.044 0.619 H4 J1O 24 J1O H5 H5 H 0 1 N N N 50.138 -6.311 24.315 -1.147 0.132 -2.526 H5 J1O 25 J1O H6 H6 H 0 1 N N N 50.671 -4.720 23.672 -0.120 1.585 -2.589 H6 J1O 26 J1O H7 H7 H 0 1 N N N 49.022 -5.331 23.304 0.233 0.295 -1.414 H7 J1O 27 J1O H8 H8 H 0 1 N N N 49.720 -8.191 22.842 -3.282 2.679 -0.904 H8 J1O 28 J1O H9 H9 H 0 1 N N N 48.717 -7.263 21.676 -2.316 2.830 -2.391 H9 J1O 29 J1O H10 H10 H 0 1 N N N 50.153 -8.176 21.099 -3.260 1.351 -2.089 H10 J1O 30 J1O H11 H11 H 0 1 N N N 51.209 -4.645 21.143 -0.246 3.293 -0.918 H11 J1O 31 J1O H12 H12 H 0 1 N N N 50.758 -6.291 19.100 -1.985 2.799 1.354 H12 J1O 32 J1O H13 H13 H 0 1 N N N 49.701 -3.291 21.620 1.532 1.417 -0.946 H13 J1O 33 J1O H14 H14 H 0 1 N N N 47.818 -2.079 20.881 2.945 1.402 1.500 H14 J1O 34 J1O H15 H15 H 0 1 N N N 47.285 -3.514 19.941 2.008 -0.107 1.383 H15 J1O 35 J1O H16 H16 H 0 1 N N N 46.859 -4.739 22.139 3.068 -0.596 -0.804 H16 J1O 36 J1O H17 H17 H 0 1 N N N 47.278 -3.232 23.023 4.005 0.913 -0.688 H17 J1O 37 J1O H18 H18 H 0 1 N N N 45.442 -2.327 21.187 5.069 0.091 1.395 H18 J1O 38 J1O H19 H19 H 0 1 N N N 44.827 -3.978 21.537 4.133 -1.418 1.279 H19 J1O 39 J1O H20 H20 H 0 1 N N N 43.804 -2.916 24.771 7.328 -2.227 -0.329 H20 J1O 40 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal J1O OAD CAQ DOUB N N 1 J1O OAG CAR SING N N 2 J1O CAQ CAR SING N N 3 J1O CAQ NAN SING N N 4 J1O CAR CAS SING N N 5 J1O CAK NAN SING N N 6 J1O CAK CAJ SING N N 7 J1O CAL CAJ SING N N 8 J1O CAL CAP SING N N 9 J1O CAB CAS SING N N 10 J1O CAS CAM SING N N 11 J1O CAS CAA SING N N 12 J1O CAM OAO SING N N 13 J1O CAP OAF DOUB N N 14 J1O CAP OAC SING N N 15 J1O OAO PAT SING N N 16 J1O OAE PAT DOUB N N 17 J1O PAT OAH SING N N 18 J1O PAT OAI SING N N 19 J1O OAH H1 SING N N 20 J1O OAI H2 SING N N 21 J1O CAM H3 SING N N 22 J1O CAM H4 SING N N 23 J1O CAA H5 SING N N 24 J1O CAA H6 SING N N 25 J1O CAA H7 SING N N 26 J1O CAB H8 SING N N 27 J1O CAB H9 SING N N 28 J1O CAB H10 SING N N 29 J1O CAR H11 SING N N 30 J1O OAG H12 SING N N 31 J1O NAN H13 SING N N 32 J1O CAK H14 SING N N 33 J1O CAK H15 SING N N 34 J1O CAJ H16 SING N N 35 J1O CAJ H17 SING N N 36 J1O CAL H18 SING N N 37 J1O CAL H19 SING N N 38 J1O OAC H20 SING N N 39 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor J1O InChI InChI 1.03 "InChI=1S/C10H20NO8P/c1-10(2,6-19-20(16,17)18)8(14)9(15)11-5-3-4-7(12)13/h8,14H,3-6H2,1-2H3,(H,11,15)(H,12,13)(H2,16,17,18)/t8-/m0/s1" J1O InChIKey InChI 1.03 PLUYTYOYZMZCNI-QMMMGPOBSA-N J1O SMILES_CANONICAL CACTVS 3.385 "CC(C)(CO[P](O)(O)=O)[C@@H](O)C(=O)NCCCC(O)=O" J1O SMILES CACTVS 3.385 "CC(C)(CO[P](O)(O)=O)[CH](O)C(=O)NCCCC(O)=O" J1O SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)(COP(=O)(O)O)[C@H](C(=O)NCCCC(=O)O)O" J1O SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)(COP(=O)(O)O)C(C(=O)NCCCC(=O)O)O" # _pdbx_chem_comp_identifier.comp_id J1O _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-[[(2~{R})-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]butanoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site J1O "Create component" 2021-03-19 PDBJ J1O "Initial release" 2021-11-24 RCSB ##