data_J3C # _chem_comp.id J3C _chem_comp.name "(7R,8R,9S)-2,3-dimethyl-9-phenyl-7,8,9,10-tetrahydroimidazo[1,2-h][1,7]naphthyridine-7,8-diol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H19 N3 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-03-30 _chem_comp.pdbx_modified_date 2021-08-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 309.362 _chem_comp.one_letter_code ? _chem_comp.three_letter_code J3C _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7EFL _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal J3C C10 C1 C 0 1 N N N -51.718 11.124 -7.031 5.550 0.482 -0.137 C10 J3C 1 J3C C11 C2 C 0 1 N N R -50.686 18.441 -9.124 -1.746 -1.647 -0.412 C11 J3C 2 J3C C12 C3 C 0 1 N N S -50.235 18.187 -7.658 -1.742 -0.439 0.534 C12 J3C 3 J3C C13 C4 C 0 1 Y N N -49.147 19.019 -7.057 -2.966 0.405 0.289 C13 J3C 4 J3C C14 C5 C 0 1 Y N N -49.228 19.354 -5.715 -4.060 0.297 1.128 C14 J3C 5 J3C C15 C6 C 0 1 Y N N -48.240 20.115 -5.070 -5.183 1.071 0.903 C15 J3C 6 J3C C16 C7 C 0 1 Y N N -47.120 20.544 -5.756 -5.212 1.954 -0.161 C16 J3C 7 J3C C17 C8 C 0 1 Y N N -47.023 20.207 -7.099 -4.118 2.062 -0.999 C17 J3C 8 J3C C18 C9 C 0 1 Y N N -48.014 19.447 -7.733 -2.993 1.292 -0.771 C18 J3C 9 J3C C1 C10 C 0 1 Y N N -51.920 13.657 -8.945 3.115 -1.584 -0.259 C1 J3C 10 J3C C2 C11 C 0 1 Y N N -51.902 14.855 -9.652 1.975 -2.303 -0.277 C2 J3C 11 J3C C3 C12 C 0 1 Y N N -51.203 15.947 -9.154 0.728 -1.673 -0.099 C3 J3C 12 J3C C4 C13 C 0 1 Y N N -50.535 15.801 -7.964 0.684 -0.324 0.083 C4 J3C 13 J3C C5 C14 C 0 1 Y N N -50.592 14.588 -7.296 1.891 0.417 0.101 C5 J3C 14 J3C C6 C15 C 0 1 N N R -51.198 17.220 -9.916 -0.522 -2.512 -0.110 C6 J3C 15 J3C C7 C16 C 0 1 Y N N -50.358 12.946 -5.847 3.460 1.909 0.197 C7 J3C 16 J3C C8 C17 C 0 1 Y N N -51.143 12.517 -6.915 4.067 0.719 -0.006 C8 J3C 17 J3C C9 C18 C 0 1 N N N -49.931 12.148 -4.629 4.154 3.240 0.332 C9 J3C 18 J3C N1 N1 N 0 1 Y N N -51.271 13.543 -7.785 3.085 -0.230 -0.071 N1 J3C 19 J3C N2 N2 N 0 1 Y N N -50.034 14.225 -6.121 2.142 1.709 0.260 N2 J3C 20 J3C N3 N3 N 0 1 N N N -49.832 16.817 -7.430 -0.532 0.345 0.253 N3 J3C 21 J3C O1 O1 O 0 1 N N N -52.547 17.456 -10.353 -0.685 -3.130 1.168 O1 J3C 22 J3C O2 O2 O 0 1 N N N -49.689 19.039 -9.964 -1.694 -1.195 -1.766 O2 J3C 23 J3C H1 H1 H 0 1 N N N -51.003 10.474 -7.558 5.975 0.286 0.848 H1 J3C 24 J3C H2 H2 H 0 1 N N N -51.907 10.721 -6.025 5.725 -0.376 -0.786 H2 J3C 25 J3C H3 H3 H 0 1 N N N -52.662 11.163 -7.594 6.022 1.365 -0.567 H3 J3C 26 J3C H4 H4 H 0 1 N N N -51.531 19.143 -9.065 -2.653 -2.231 -0.256 H4 J3C 27 J3C H5 H5 H 0 1 N N N -51.129 18.361 -7.041 -1.729 -0.781 1.569 H5 J3C 28 J3C H6 H6 H 0 1 N N N -50.081 19.018 -5.145 -4.037 -0.393 1.959 H6 J3C 29 J3C H7 H7 H 0 1 N N N -48.357 20.368 -4.026 -6.037 0.987 1.558 H7 J3C 30 J3C H8 H8 H 0 1 N N N -46.349 21.120 -5.266 -6.089 2.559 -0.336 H8 J3C 31 J3C H9 H9 H 0 1 N N N -46.166 20.538 -7.667 -4.141 2.751 -1.830 H9 J3C 32 J3C H10 H10 H 0 1 N N N -47.893 19.188 -8.774 -2.139 1.376 -1.426 H10 J3C 33 J3C H11 H11 H 0 1 N N N -52.464 12.811 -9.339 4.063 -2.082 -0.395 H11 J3C 34 J3C H12 H12 H 0 1 N N N -52.432 14.936 -10.589 2.018 -3.371 -0.428 H12 J3C 35 J3C H13 H13 H 0 1 N N N -50.551 17.096 -10.797 -0.430 -3.284 -0.873 H13 J3C 36 J3C H14 H14 H 0 1 N N N -49.302 12.776 -3.981 4.254 3.699 -0.651 H14 J3C 37 J3C H15 H15 H 0 1 N N N -50.823 11.824 -4.072 3.568 3.892 0.980 H15 J3C 38 J3C H16 H16 H 0 1 N N N -49.359 11.265 -4.951 5.143 3.091 0.766 H16 J3C 39 J3C H17 H17 H 0 1 N N N -49.835 16.678 -6.440 -0.576 1.311 0.186 H17 J3C 40 J3C H18 H18 H 0 1 N N N -52.583 18.267 -10.847 0.047 -3.709 1.422 H18 J3C 41 J3C H19 H19 H 0 1 N N N -49.328 19.805 -9.532 -1.692 -1.908 -2.420 H19 J3C 42 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal J3C O1 C6 SING N N 1 J3C O2 C11 SING N N 2 J3C C6 C3 SING N N 3 J3C C6 C11 SING N N 4 J3C C2 C3 SING Y N 5 J3C C2 C1 DOUB Y N 6 J3C C3 C4 DOUB Y N 7 J3C C11 C12 SING N N 8 J3C C1 N1 SING Y N 9 J3C C4 N3 SING N N 10 J3C C4 C5 SING Y N 11 J3C N1 C5 SING Y N 12 J3C N1 C8 SING Y N 13 J3C C18 C17 DOUB Y N 14 J3C C18 C13 SING Y N 15 J3C C12 N3 SING N N 16 J3C C12 C13 SING N N 17 J3C C5 N2 DOUB Y N 18 J3C C17 C16 SING Y N 19 J3C C13 C14 DOUB Y N 20 J3C C10 C8 SING N N 21 J3C C8 C7 DOUB Y N 22 J3C N2 C7 SING Y N 23 J3C C7 C9 SING N N 24 J3C C16 C15 DOUB Y N 25 J3C C14 C15 SING Y N 26 J3C C10 H1 SING N N 27 J3C C10 H2 SING N N 28 J3C C10 H3 SING N N 29 J3C C11 H4 SING N N 30 J3C C12 H5 SING N N 31 J3C C14 H6 SING N N 32 J3C C15 H7 SING N N 33 J3C C16 H8 SING N N 34 J3C C17 H9 SING N N 35 J3C C18 H10 SING N N 36 J3C C1 H11 SING N N 37 J3C C2 H12 SING N N 38 J3C C6 H13 SING N N 39 J3C C9 H14 SING N N 40 J3C C9 H15 SING N N 41 J3C C9 H16 SING N N 42 J3C N3 H17 SING N N 43 J3C O1 H18 SING N N 44 J3C O2 H19 SING N N 45 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor J3C InChI InChI 1.03 "InChI=1S/C18H19N3O2/c1-10-11(2)21-9-8-13-15(18(21)19-10)20-14(17(23)16(13)22)12-6-4-3-5-7-12/h3-9,14,16-17,20,22-23H,1-2H3/t14-,16+,17+/m0/s1" J3C InChIKey InChI 1.03 FHHGNULEXOWEKU-USXIJHARSA-N J3C SMILES_CANONICAL CACTVS 3.385 "Cc1nc2n(ccc3[C@@H](O)[C@H](O)[C@@H](Nc23)c4ccccc4)c1C" J3C SMILES CACTVS 3.385 "Cc1nc2n(ccc3[CH](O)[CH](O)[CH](Nc23)c4ccccc4)c1C" J3C SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(n2ccc3c(c2n1)N[C@H]([C@H]([C@@H]3O)O)c4ccccc4)C" J3C SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c(n2ccc3c(c2n1)NC(C(C3O)O)c4ccccc4)C" # _pdbx_chem_comp_identifier.comp_id J3C _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(7~{R},8~{R},9~{S})-2,3-dimethyl-9-phenyl-7,8,9,10-tetrahydroimidazo[1,2-h][1,7]naphthyridine-7,8-diol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site J3C "Create component" 2021-03-30 PDBJ J3C "Initial release" 2021-09-01 RCSB ##