data_J3S
#
_chem_comp.id J3S
_chem_comp.name "(6S)-6,8-disulfanyloctanamide"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C8 H17 N O S2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2018-08-07
_chem_comp.pdbx_modified_date 2020-01-31
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 207.357
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code J3S
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6EBG
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
# #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
J3S C1 C1 C 0 1 N N N 21.215 -8.046 5.765 4.883 -0.326 0.009 C1 J3S 1
J3S O1 O1 O 0 1 N N N 20.931 -9.071 5.205 4.816 -1.310 0.715 O1 J3S 2
J3S C2 C2 C 0 1 N N N 22.639 -7.595 5.876 3.622 0.350 -0.464 C2 J3S 3
J3S C3 C3 C 0 1 N N N 23.611 -8.302 4.939 2.406 -0.403 0.078 C3 J3S 4
J3S C4 C4 C 0 1 N N N 24.576 -7.357 4.260 1.125 0.283 -0.402 C4 J3S 5
J3S C5 C5 C 0 1 N N N 26.016 -7.837 4.138 -0.091 -0.470 0.140 C5 J3S 6
J3S C6 C6 C 0 1 N N S 27.083 -6.759 4.084 -1.372 0.216 -0.340 C6 J3S 7
J3S C7 C7 C 0 1 N N N 28.515 -7.329 4.148 -2.586 -0.606 0.097 C7 J3S 8
J3S C8 C8 C 0 1 N N N 29.247 -7.029 5.454 -3.857 0.012 -0.488 C8 J3S 9
J3S N1 N1 N 0 1 N N N 20.206 -7.134 6.372 6.086 0.166 -0.347 N1 J3S 10
J3S S1 S1 S 0 1 N N N 26.621 -5.701 2.670 -1.474 1.877 0.382 S1 J3S 11
J3S S2 S2 S 0 1 N N N 29.860 -5.323 5.594 -5.297 -0.963 0.030 S2 J3S 12
J3S H1 H1 H 0 1 N N N 22.973 -7.769 6.910 3.603 1.378 -0.103 H1 J3S 13
J3S H2 H2 H 0 1 N N N 22.674 -6.518 5.656 3.595 0.347 -1.554 H2 J3S 14
J3S H3 H3 H 0 1 N N N 23.032 -8.826 4.165 2.424 -1.431 -0.283 H3 J3S 15
J3S H4 H4 H 0 1 N N N 24.190 -9.033 5.522 2.433 -0.400 1.168 H4 J3S 16
J3S H5 H5 H 0 1 N N N 24.583 -6.417 4.832 1.107 1.311 -0.041 H5 J3S 17
J3S H6 H6 H 0 1 N N N 24.199 -7.166 3.244 1.098 0.280 -1.492 H6 J3S 18
J3S H7 H7 H 0 1 N N N 26.094 -8.432 3.216 -0.073 -1.498 -0.221 H7 J3S 19
J3S H8 H8 H 0 1 N N N 26.230 -8.477 5.006 -0.064 -0.467 1.230 H8 J3S 20
J3S H9 H9 H 0 1 N N N 26.949 -6.115 4.966 -1.357 0.293 -1.427 H9 J3S 21
J3S H10 H10 H 0 1 N N N 28.458 -8.421 4.027 -2.480 -1.629 -0.263 H10 J3S 22
J3S H11 H11 H 0 1 N N N 29.096 -6.898 3.319 -2.650 -0.608 1.185 H11 J3S 23
J3S H12 H12 H 0 1 N N N 28.554 -7.216 6.288 -3.963 1.035 -0.128 H12 J3S 24
J3S H13 H13 H 0 1 N N N 30.106 -7.711 5.532 -3.793 0.014 -1.576 H13 J3S 25
J3S H14 H14 H 0 1 N N N 19.234 -7.362 6.326 6.140 0.956 -0.909 H14 J3S 26
J3S H15 H15 H 0 1 N N N 20.501 -6.293 6.826 6.898 -0.269 -0.043 H15 J3S 27
J3S H16 H16 H 0 1 N N N 27.566 -4.808 2.680 -1.484 1.633 1.704 H16 J3S 28
J3S H17 H17 H 0 1 N N N 30.426 -5.334 6.764 -6.324 -0.316 -0.548 H17 J3S 29
# #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
J3S S1 C6 SING N N 1
J3S C6 C5 SING N N 2
J3S C6 C7 SING N N 3
J3S C5 C4 SING N N 4
J3S C7 C8 SING N N 5
J3S C4 C3 SING N N 6
J3S C3 C2 SING N N 7
J3S O1 C1 DOUB N N 8
J3S C8 S2 SING N N 9
J3S C1 C2 SING N N 10
J3S C1 N1 SING N N 11
J3S C2 H1 SING N N 12
J3S C2 H2 SING N N 13
J3S C3 H3 SING N N 14
J3S C3 H4 SING N N 15
J3S C4 H5 SING N N 16
J3S C4 H6 SING N N 17
J3S C5 H7 SING N N 18
J3S C5 H8 SING N N 19
J3S C6 H9 SING N N 20
J3S C7 H10 SING N N 21
J3S C7 H11 SING N N 22
J3S C8 H12 SING N N 23
J3S C8 H13 SING N N 24
J3S N1 H14 SING N N 25
J3S N1 H15 SING N N 26
J3S S1 H16 SING N N 27
J3S S2 H17 SING N N 28
# #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
J3S SMILES ACDLabs 12.01 "C(CCCCC(CCS)S)(N)=O"
J3S InChI InChI 1.03 "InChI=1S/C8H17NOS2/c9-8(10)4-2-1-3-7(12)5-6-11/h7,11-12H,1-6H2,(H2,9,10)/t7-/m0/s1"
J3S InChIKey InChI 1.03 VLYUGYAKYZETRF-ZETCQYMHSA-N
J3S SMILES_CANONICAL CACTVS 3.385 "NC(=O)CCCC[C@H](S)CCS"
J3S SMILES CACTVS 3.385 "NC(=O)CCCC[CH](S)CCS"
J3S SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C(CCC(=O)N)C[C@@H](CCS)S"
J3S SMILES "OpenEye OEToolkits" 2.0.6 "C(CCC(=O)N)CC(CCS)S"
# #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
J3S "SYSTEMATIC NAME" ACDLabs 12.01 "(6S)-6,8-disulfanyloctanamide"
J3S "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(6~{S})-6,8-bis(sulfanyl)octanamide"
# #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
J3S "Create component" 2018-08-07 RCSB
J3S "Initial release" 2020-02-05 RCSB
##