data_J49 # _chem_comp.id J49 _chem_comp.name "(2S)-2-[[4-[(4-azanyl-6-oxidanyl-pyrimidin-5-yl)carbamoylamino]phenyl]carbonylamino]pentanedioic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H18 N6 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(4-(3-(4-amino-6-hydroxypyrimidin-5-yl)ureido)benzoyl)-L-glutamic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-04-05 _chem_comp.pdbx_modified_date 2021-08-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 418.361 _chem_comp.one_letter_code ? _chem_comp.three_letter_code J49 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7EHJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal J49 C1 C1 C 0 1 Y N N -59.355 24.309 23.313 7.167 -1.479 1.834 C1 J49 1 J49 C3 C2 C 0 1 Y N N -57.447 24.162 21.933 5.613 0.151 1.347 C3 J49 2 J49 C4 C3 C 0 1 Y N N -56.813 25.162 22.718 5.594 -0.276 0.021 C4 J49 3 J49 C5 C4 C 0 1 Y N N -57.449 25.711 23.784 6.412 -1.352 -0.338 C5 J49 4 J49 C8 C5 C 0 1 N N N -55.355 26.574 21.313 3.463 0.542 -0.665 C8 J49 5 J49 C10 C6 C 0 1 Y N N -53.617 27.874 20.029 1.278 1.132 -1.385 C10 J49 6 J49 C11 C7 C 0 1 Y N N -54.516 28.121 18.836 0.548 2.177 -1.943 C11 J49 7 J49 C12 C8 C 0 1 Y N N -54.154 29.015 17.943 -0.807 2.269 -1.719 C12 J49 8 J49 C13 C9 C 0 1 Y N N -52.848 29.773 18.108 -1.450 1.312 -0.930 C13 J49 9 J49 C14 C10 C 0 1 Y N N -52.060 29.555 19.146 -0.714 0.264 -0.370 C14 J49 10 J49 C15 C11 C 0 1 Y N N -52.476 28.527 20.186 0.641 0.177 -0.598 C15 J49 11 J49 C16 C12 C 0 1 N N N -52.422 30.782 17.056 -2.902 1.408 -0.687 C16 J49 12 J49 C19 C13 C 0 1 N N S -50.540 32.327 16.260 -4.963 0.579 0.315 C19 J49 13 J49 C23 C14 C 0 1 N N N -49.102 31.894 16.092 -5.218 1.500 1.481 C23 J49 14 J49 C26 C15 C 0 1 N N N -50.465 33.739 16.854 -5.520 -0.811 0.632 C26 J49 15 J49 C27 C16 C 0 1 N N N -51.839 34.291 17.229 -5.373 -1.711 -0.596 C27 J49 16 J49 C28 C17 C 0 1 N N N -51.719 35.328 18.358 -5.922 -3.079 -0.284 C28 J49 17 J49 N2 N1 N 0 1 Y N N -58.725 23.744 22.246 6.406 -0.472 2.214 N2 J49 18 J49 N6 N2 N 0 1 Y N N -58.726 25.293 24.102 7.179 -1.915 0.591 N6 J49 19 J49 N9 N3 N 0 1 N N N -53.995 26.906 21.011 2.649 1.038 -1.618 N9 J49 20 J49 N17 N4 N 0 1 N N N -51.091 31.356 17.190 -3.521 0.484 0.074 N17 J49 21 J49 N21 N5 N 0 1 N N N -55.484 25.563 22.332 4.771 0.353 -0.928 N21 J49 22 J49 N22 N6 N 0 1 N N N -56.780 26.719 24.565 6.431 -1.817 -1.646 N22 J49 23 J49 O7 O1 O 0 1 N N N -56.301 27.088 20.774 3.016 0.265 0.431 O7 J49 24 J49 O18 O2 O 0 1 N N N -53.151 31.047 16.152 -3.541 2.320 -1.174 O18 J49 25 J49 O20 O3 O 0 1 N N N -56.745 23.643 20.859 4.835 1.187 1.748 O20 J49 26 J49 O24 O4 O 0 1 N N N -48.558 31.162 16.959 -6.475 1.739 1.885 O24 J49 27 J49 O25 O5 O 0 1 N N N -48.444 32.272 15.105 -4.290 2.023 2.051 O25 J49 28 J49 O29 O6 O 0 1 N N N -50.879 35.171 19.285 -5.898 -4.041 -1.220 O29 J49 29 J49 O30 O7 O 0 1 N N N -52.469 36.338 18.364 -6.383 -3.311 0.808 O30 J49 30 J49 H1 H1 H 0 1 N N N -60.359 23.996 23.560 7.802 -1.959 2.564 H1 J49 31 J49 H2 H2 H 0 1 N N N -55.439 27.572 18.721 1.046 2.917 -2.553 H2 J49 32 J49 H3 H3 H 0 1 N N N -54.787 29.211 17.090 -1.372 3.080 -2.153 H3 J49 33 J49 H4 H4 H 0 1 N N N -51.134 30.099 19.254 -1.208 -0.478 0.241 H4 J49 34 J49 H5 H5 H 0 1 N N N -51.848 28.332 21.043 1.209 -0.635 -0.170 H5 J49 35 J49 H6 H6 H 0 1 N N N -51.072 32.331 15.297 -5.454 0.973 -0.574 H6 J49 36 J49 H7 H7 H 0 1 N N N -49.839 33.708 17.758 -4.967 -1.242 1.467 H7 J49 37 J49 H8 H8 H 0 1 N N N -50.006 34.409 16.112 -6.573 -0.728 0.898 H8 J49 38 J49 H9 H9 H 0 1 N N N -52.289 34.769 16.346 -5.926 -1.280 -1.431 H9 J49 39 J49 H10 H10 H 0 1 N N N -52.481 33.464 17.566 -4.319 -1.794 -0.862 H10 J49 40 J49 H12 H12 H 0 1 N N N -53.270 26.435 21.514 3.018 1.331 -2.467 H12 J49 41 J49 H13 H13 H 0 1 N N N -50.526 31.067 17.963 -3.011 -0.245 0.463 H13 J49 42 J49 H14 H14 H 0 1 N N N -54.677 25.153 22.757 5.144 0.651 -1.772 H14 J49 43 J49 H15 H15 H 0 1 N N N -57.379 27.018 25.308 5.873 -1.396 -2.319 H15 J49 44 J49 H16 H16 H 0 1 N N N -55.938 26.339 24.948 7.001 -2.564 -1.887 H16 J49 45 J49 H17 H17 H 0 1 N N N -47.656 30.994 16.712 -6.589 2.336 2.636 H17 J49 46 J49 H18 H18 H 0 1 N N N -50.943 35.895 19.897 -6.261 -4.903 -0.974 H18 J49 47 J49 H11 H11 H 0 1 N N N -57.278 22.993 20.416 5.224 2.057 1.587 H11 J49 48 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal J49 O25 C23 DOUB N N 1 J49 C23 C19 SING N N 2 J49 C23 O24 SING N N 3 J49 O18 C16 DOUB N N 4 J49 C19 C26 SING N N 5 J49 C19 N17 SING N N 6 J49 C26 C27 SING N N 7 J49 C16 N17 SING N N 8 J49 C16 C13 SING N N 9 J49 C27 C28 SING N N 10 J49 C12 C13 DOUB Y N 11 J49 C12 C11 SING Y N 12 J49 C13 C14 SING Y N 13 J49 C28 O30 DOUB N N 14 J49 C28 O29 SING N N 15 J49 C11 C10 DOUB Y N 16 J49 C14 C15 DOUB Y N 17 J49 C10 C15 SING Y N 18 J49 C10 N9 SING N N 19 J49 O7 C8 DOUB N N 20 J49 O20 C3 SING N N 21 J49 N9 C8 SING N N 22 J49 C8 N21 SING N N 23 J49 C3 N2 SING Y N 24 J49 C3 C4 DOUB Y N 25 J49 N2 C1 DOUB Y N 26 J49 N21 C4 SING N N 27 J49 C4 C5 SING Y N 28 J49 C1 N6 SING Y N 29 J49 C5 N6 DOUB Y N 30 J49 C5 N22 SING N N 31 J49 C1 H1 SING N N 32 J49 C11 H2 SING N N 33 J49 C12 H3 SING N N 34 J49 C14 H4 SING N N 35 J49 C15 H5 SING N N 36 J49 C19 H6 SING N N 37 J49 C26 H7 SING N N 38 J49 C26 H8 SING N N 39 J49 C27 H9 SING N N 40 J49 C27 H10 SING N N 41 J49 N9 H12 SING N N 42 J49 N17 H13 SING N N 43 J49 N21 H14 SING N N 44 J49 N22 H15 SING N N 45 J49 N22 H16 SING N N 46 J49 O24 H17 SING N N 47 J49 O29 H18 SING N N 48 J49 O20 H11 SING N N 49 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor J49 InChI InChI 1.03 "InChI=1S/C17H18N6O7/c18-13-12(15(27)20-7-19-13)23-17(30)21-9-3-1-8(2-4-9)14(26)22-10(16(28)29)5-6-11(24)25/h1-4,7,10H,5-6H2,(H,22,26)(H,24,25)(H,28,29)(H2,21,23,30)(H3,18,19,20,27)/t10-/m0/s1" J49 InChIKey InChI 1.03 OUMOQELZARCDHX-JTQLQIEISA-N J49 SMILES_CANONICAL CACTVS 3.385 "Nc1ncnc(O)c1NC(=O)Nc2ccc(cc2)C(=O)N[C@@H](CCC(O)=O)C(O)=O" J49 SMILES CACTVS 3.385 "Nc1ncnc(O)c1NC(=O)Nc2ccc(cc2)C(=O)N[CH](CCC(O)=O)C(O)=O" J49 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C(=O)N[C@@H](CCC(=O)O)C(=O)O)NC(=O)Nc2c(ncnc2O)N" J49 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C(=O)NC(CCC(=O)O)C(=O)O)NC(=O)Nc2c(ncnc2O)N" # _pdbx_chem_comp_identifier.comp_id J49 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-[[4-[(4-azanyl-6-oxidanyl-pyrimidin-5-yl)carbamoylamino]phenyl]carbonylamino]pentanedioic acid" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id J49 _pdbx_chem_comp_synonyms.name "(4-(3-(4-amino-6-hydroxypyrimidin-5-yl)ureido)benzoyl)-L-glutamic acid" _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site J49 "Create component" 2021-04-05 PDBJ J49 "Initial release" 2021-08-11 RCSB ##