data_J4C # _chem_comp.id J4C _chem_comp.name "(2S)-2-[[4-[[1-[(3,4-dichlorophenyl)methyl]-3,7-dimethyl-2,6-bis(oxidanylidene)purin-8-yl]amino]phenyl]carbonylamino]pentanedioic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H24 Cl2 N6 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(4-((1-(3,4-dichlorobenzyl)-3,7-dimethyl-2,6-dioxo-2,3,6,7-tetrahydro-1H-purin-8-yl)amino)benzoyl)-L-glutamic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-04-05 _chem_comp.pdbx_modified_date 2021-08-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 603.411 _chem_comp.one_letter_code ? _chem_comp.three_letter_code J4C _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7EHM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal J4C C2 C1 C 0 1 N N N 12.289 -55.606 -3.292 3.748 -0.959 2.055 C2 J4C 1 J4C C5 C2 C 0 1 Y N N 11.976 -57.570 -1.496 2.478 1.225 1.019 C5 J4C 2 J4C C6 C3 C 0 1 N N N 13.205 -57.120 -1.795 3.857 1.255 1.292 C6 J4C 3 J4C N N1 N 0 1 N N N 3.384 -59.837 -1.234 -6.655 -0.554 -0.363 N J4C 4 J4C CA C4 C 0 1 N N S 1.953 -59.777 -1.594 -7.915 -1.291 -0.235 CA J4C 5 J4C C C5 C 0 1 N N N 1.407 -61.082 -2.202 -7.779 -2.638 -0.897 C J4C 6 J4C O O1 O 0 1 N N N 0.675 -61.782 -1.466 -8.816 -3.490 -0.904 O J4C 7 J4C CB C6 C 0 1 N N N 1.776 -58.631 -2.602 -9.038 -0.502 -0.911 CB J4C 8 J4C CG C7 C 0 1 N N N 3.039 -58.648 -3.507 -9.260 0.813 -0.161 CG J4C 9 J4C CD C8 C 0 1 N N N 3.180 -57.355 -4.327 -10.366 1.591 -0.826 CD J4C 10 J4C OE1 O2 O 0 1 N N N 2.857 -57.422 -5.526 -10.920 1.140 -1.801 OE1 J4C 11 J4C OE2 O3 O 0 1 N N N 3.622 -56.335 -3.739 -10.736 2.785 -0.336 OE2 J4C 12 J4C OXT O4 O 0 1 N N N 1.700 -61.331 -3.402 -6.737 -2.950 -1.422 OXT J4C 13 J4C C4 C9 C 0 1 Y N N 10.903 -57.049 -2.096 1.758 0.064 1.282 C4 J4C 14 J4C C8 C10 C 0 1 Y N N 10.216 -58.575 -0.742 0.360 1.519 0.480 C8 J4C 15 J4C CAA C11 C 0 1 N N N 14.733 -55.693 -2.998 5.889 0.183 2.090 CAA J4C 16 J4C CAH C12 C 0 1 N N N 9.888 -55.472 -3.671 1.693 -2.266 2.095 CAH J4C 17 J4C CAN C13 C 0 1 N N N 12.264 -59.426 0.245 1.856 3.512 0.081 CAN J4C 18 J4C CAP C14 C 0 1 Y N N 8.161 -59.606 -0.044 -2.014 1.384 0.160 CAP J4C 19 J4C CAQ C15 C 0 1 Y N N 7.502 -60.078 1.095 -2.188 0.483 1.207 CAQ J4C 20 J4C CAR C16 C 0 1 Y N N 6.113 -60.284 1.087 -3.371 -0.210 1.330 CAR J4C 21 J4C CAS C17 C 0 1 Y N N 5.355 -60.050 -0.065 -4.398 -0.008 0.403 CAS J4C 22 J4C CAT C18 C 0 1 Y N N 6.018 -59.576 -1.199 -4.219 0.897 -0.647 CAT J4C 23 J4C CAU C19 C 0 1 Y N N 7.401 -59.368 -1.192 -3.036 1.592 -0.761 CAU J4C 24 J4C CAV C20 C 0 1 Y N N 15.078 -54.275 -2.537 6.652 -0.274 0.873 CAV J4C 25 J4C CAW C21 C 0 1 Y N N 15.735 -53.424 -3.421 6.940 -1.616 0.702 CAW J4C 26 J4C CAX C22 C 0 1 Y N N 16.072 -52.131 -3.055 7.640 -2.037 -0.412 CAX J4C 27 J4C CAY C23 C 0 1 Y N N 15.740 -51.703 -1.780 8.053 -1.116 -1.358 CAY J4C 28 J4C CAZ C24 C 0 1 Y N N 15.094 -52.555 -0.897 7.764 0.228 -1.188 CAZ J4C 29 J4C CBA C25 C 0 1 Y N N 14.749 -53.848 -1.258 7.059 0.647 -0.074 CBA J4C 30 J4C CBD C26 C 0 1 N N N 3.950 -60.224 -0.079 -5.666 -0.750 0.531 CBD J4C 31 J4C N1 N2 N 0 1 N N N 13.357 -56.139 -2.677 4.453 0.157 1.803 N1 J4C 32 J4C N3 N3 N 0 1 N N N 11.061 -56.065 -2.990 2.426 -1.030 1.808 N3 J4C 33 J4C N7 N4 N 0 1 Y N N 11.540 -58.518 -0.661 1.569 2.141 0.508 N7 J4C 34 J4C N9 N5 N 0 1 Y N N 9.808 -57.658 -1.620 0.489 0.291 0.941 N9 J4C 35 J4C NAO N6 N 0 1 N N N 9.508 -59.440 0.022 -0.816 2.084 0.039 NAO J4C 36 J4C O2 O5 O 0 1 N N N 12.437 -54.707 -4.128 4.319 -1.931 2.511 O2 J4C 37 J4C O6 O6 O 0 1 N N N 14.230 -57.575 -1.274 4.508 2.261 1.069 O6 J4C 38 J4C OBE O7 O 0 1 N N N 3.320 -60.619 0.911 -5.820 -1.538 1.445 OBE J4C 39 J4C CL1 CL1 CL 0 0 N N N 16.130 -50.116 -1.237 8.933 -1.644 -2.759 CL1 J4C 40 J4C CL2 CL2 CL 0 0 N N N 14.714 -51.974 0.637 8.282 1.385 -2.374 CL2 J4C 41 J4C H1 H1 H 0 1 N N N 4.020 -59.549 -1.950 -6.533 0.074 -1.092 H1 J4C 42 J4C H2 H2 H 0 1 N N N 1.365 -59.542 -0.695 -8.151 -1.427 0.820 H2 J4C 43 J4C H3 H3 H 0 1 N N N 0.368 -62.539 -1.951 -8.681 -4.342 -1.341 H3 J4C 44 J4C H4 H4 H 0 1 N N N 1.698 -57.669 -2.075 -8.762 -0.289 -1.944 H4 J4C 45 J4C H5 H5 H 0 1 N N N 0.872 -58.792 -3.207 -9.956 -1.089 -0.894 H5 J4C 46 J4C H6 H6 H 0 1 N N N 2.969 -59.501 -4.198 -9.536 0.600 0.872 H6 J4C 47 J4C H7 H7 H 0 1 N N N 3.929 -58.764 -2.871 -8.342 1.401 -0.178 H7 J4C 48 J4C H8 H8 H 0 1 N N N 3.674 -55.612 -4.353 -11.450 3.246 -0.797 H8 J4C 49 J4C H9 H9 H 0 1 N N N 15.438 -56.388 -2.519 6.105 -0.482 2.926 H9 J4C 50 J4C H10 H10 H 0 1 N N N 14.860 -55.737 -4.090 6.190 1.199 2.346 H10 J4C 51 J4C H11 H11 H 0 1 N N N 8.970 -55.958 -3.311 2.380 -3.010 2.500 H11 J4C 52 J4C H12 H12 H 0 1 N N N 9.843 -54.395 -3.452 0.908 -2.062 2.823 H12 J4C 53 J4C H13 H13 H 0 1 N N N 9.980 -55.622 -4.757 1.247 -2.646 1.176 H13 J4C 54 J4C H14 H14 H 0 1 N N N 11.544 -60.069 0.772 2.122 3.516 -0.975 H14 J4C 55 J4C H15 H15 H 0 1 N N N 12.956 -60.051 -0.339 0.973 4.133 0.236 H15 J4C 56 J4C H16 H16 H 0 1 N N N 12.833 -58.835 0.978 2.686 3.909 0.667 H16 J4C 57 J4C H17 H17 H 0 1 N N N 8.068 -60.287 1.991 -1.395 0.327 1.922 H17 J4C 58 J4C H18 H18 H 0 1 N N N 5.622 -60.629 1.985 -3.506 -0.910 2.141 H18 J4C 59 J4C H19 H19 H 0 1 N N N 5.454 -59.367 -2.096 -5.012 1.059 -1.362 H19 J4C 60 J4C H20 H20 H 0 1 N N N 7.890 -59.018 -2.089 -2.898 2.292 -1.572 H20 J4C 61 J4C H21 H21 H 0 1 N N N 15.987 -53.778 -4.410 6.618 -2.335 1.441 H21 J4C 62 J4C H22 H22 H 0 1 N N N 16.580 -51.474 -3.745 7.865 -3.085 -0.545 H22 J4C 63 J4C H23 H23 H 0 1 N N N 14.240 -54.503 -0.566 6.830 1.694 0.058 H23 J4C 64 J4C H24 H24 H 0 1 N N N 10.013 -59.997 0.682 -0.810 2.970 -0.356 H24 J4C 65 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal J4C OE1 CD DOUB N N 1 J4C CD OE2 SING N N 2 J4C CD CG SING N N 3 J4C O2 C2 DOUB N N 4 J4C CAH N3 SING N N 5 J4C CG CB SING N N 6 J4C CAW CAX DOUB Y N 7 J4C CAW CAV SING Y N 8 J4C OXT C DOUB N N 9 J4C C2 N3 SING N N 10 J4C C2 N1 SING N N 11 J4C CAX CAY SING Y N 12 J4C CAA N1 SING N N 13 J4C CAA CAV SING N N 14 J4C N3 C4 SING N N 15 J4C N1 C6 SING N N 16 J4C CB CA SING N N 17 J4C CAV CBA DOUB Y N 18 J4C C CA SING N N 19 J4C C O SING N N 20 J4C C4 N9 SING Y N 21 J4C C4 C5 DOUB Y N 22 J4C C6 C5 SING N N 23 J4C C6 O6 DOUB N N 24 J4C CAY CL1 SING N N 25 J4C CAY CAZ DOUB Y N 26 J4C N9 C8 DOUB Y N 27 J4C CA N SING N N 28 J4C C5 N7 SING Y N 29 J4C CBA CAZ SING Y N 30 J4C N CBD SING N N 31 J4C CAT CAU DOUB Y N 32 J4C CAT CAS SING Y N 33 J4C CAU CAP SING Y N 34 J4C CAZ CL2 SING N N 35 J4C C8 N7 SING Y N 36 J4C C8 NAO SING N N 37 J4C N7 CAN SING N N 38 J4C CBD CAS SING N N 39 J4C CBD OBE DOUB N N 40 J4C CAS CAR DOUB Y N 41 J4C CAP NAO SING N N 42 J4C CAP CAQ DOUB Y N 43 J4C CAR CAQ SING Y N 44 J4C N H1 SING N N 45 J4C CA H2 SING N N 46 J4C O H3 SING N N 47 J4C CB H4 SING N N 48 J4C CB H5 SING N N 49 J4C CG H6 SING N N 50 J4C CG H7 SING N N 51 J4C OE2 H8 SING N N 52 J4C CAA H9 SING N N 53 J4C CAA H10 SING N N 54 J4C CAH H11 SING N N 55 J4C CAH H12 SING N N 56 J4C CAH H13 SING N N 57 J4C CAN H14 SING N N 58 J4C CAN H15 SING N N 59 J4C CAN H16 SING N N 60 J4C CAQ H17 SING N N 61 J4C CAR H18 SING N N 62 J4C CAT H19 SING N N 63 J4C CAU H20 SING N N 64 J4C CAW H21 SING N N 65 J4C CAX H22 SING N N 66 J4C CBA H23 SING N N 67 J4C NAO H24 SING N N 68 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor J4C InChI InChI 1.03 "InChI=1S/C26H24Cl2N6O7/c1-32-20-21(33(2)26(41)34(23(20)38)12-13-3-8-16(27)17(28)11-13)31-25(32)29-15-6-4-14(5-7-15)22(37)30-18(24(39)40)9-10-19(35)36/h3-8,11,18H,9-10,12H2,1-2H3,(H,29,31)(H,30,37)(H,35,36)(H,39,40)/t18-/m0/s1" J4C InChIKey InChI 1.03 VGQGEPKBLLWTIL-SFHVURJKSA-N J4C SMILES_CANONICAL CACTVS 3.385 "CN1C(=O)N(Cc2ccc(Cl)c(Cl)c2)C(=O)c3n(C)c(Nc4ccc(cc4)C(=O)N[C@@H](CCC(O)=O)C(O)=O)nc13" J4C SMILES CACTVS 3.385 "CN1C(=O)N(Cc2ccc(Cl)c(Cl)c2)C(=O)c3n(C)c(Nc4ccc(cc4)C(=O)N[CH](CCC(O)=O)C(O)=O)nc13" J4C SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cn1c2c(nc1Nc3ccc(cc3)C(=O)N[C@@H](CCC(=O)O)C(=O)O)N(C(=O)N(C2=O)Cc4ccc(c(c4)Cl)Cl)C" J4C SMILES "OpenEye OEToolkits" 2.0.7 "Cn1c2c(nc1Nc3ccc(cc3)C(=O)NC(CCC(=O)O)C(=O)O)N(C(=O)N(C2=O)Cc4ccc(c(c4)Cl)Cl)C" # _pdbx_chem_comp_identifier.comp_id J4C _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-[[4-[[1-[(3,4-dichlorophenyl)methyl]-3,7-dimethyl-2,6-bis(oxidanylidene)purin-8-yl]amino]phenyl]carbonylamino]pentanedioic acid" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id J4C _pdbx_chem_comp_synonyms.name "(4-((1-(3,4-dichlorobenzyl)-3,7-dimethyl-2,6-dioxo-2,3,6,7-tetrahydro-1H-purin-8-yl)amino)benzoyl)-L-glutamic acid" _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site J4C "Create component" 2021-04-05 PDBJ J4C "Initial release" 2021-08-11 RCSB ##