data_J4I # _chem_comp.id J4I _chem_comp.name "6-{[(5-methoxy-3,4,6-trimethylpyridin-2-yl)methyl]sulfanyl}-2H,5H-[1,3]dioxolo[4,5-f]benzimidazole" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H19 N3 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-02-01 _chem_comp.pdbx_modified_date 2022-10-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 357.427 _chem_comp.one_letter_code ? _chem_comp.three_letter_code J4I _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5SH4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal J4I C1 C1 C 0 1 Y N N 95.049 -12.708 9.005 3.539 0.008 -1.000 C1 J4I 1 J4I C2 C2 C 0 1 Y N N 93.585 -12.748 8.984 3.155 0.016 0.350 C2 J4I 2 J4I C3 C3 C 0 1 Y N N 95.780 -13.224 7.924 4.884 -0.010 -1.340 C3 J4I 3 J4I N4 N1 N 0 1 Y N N 95.442 -12.096 10.230 2.364 0.027 -1.736 N4 J4I 4 J4I C5 C4 C 0 1 Y N N 92.787 -13.258 7.943 4.135 0.006 1.347 C5 J4I 5 J4I N6 N2 N 0 1 Y N N 93.114 -12.173 10.148 1.795 0.034 0.380 N6 J4I 6 J4I C7 C5 C 0 1 Y N N 94.959 -13.735 6.924 5.847 -0.020 -0.347 C7 J4I 7 J4I C8 C6 C 0 1 Y N N 94.211 -11.801 10.874 1.328 0.046 -0.844 C8 J4I 8 J4I C9 C7 C 0 1 Y N N 93.520 -13.755 6.911 5.470 -0.012 0.998 C9 J4I 9 J4I O10 O1 O 0 1 N N N 95.353 -14.333 5.725 7.211 -0.038 -0.417 O10 J4I 10 J4I S11 S1 S 0 1 N N N 94.059 -11.026 12.376 -0.380 0.075 -1.276 S11 J4I 11 J4I O12 O2 O 0 1 N N N 93.020 -14.341 5.723 6.601 -0.024 1.766 O12 J4I 12 J4I C13 C8 C 0 1 N N N 94.173 -14.928 5.096 7.668 0.374 0.886 C13 J4I 13 J4I C14 C9 C 0 1 N N N 92.678 -9.868 12.172 -1.121 0.090 0.375 C14 J4I 14 J4I C15 C10 C 0 1 Y N N 92.349 -9.186 13.469 -2.623 0.115 0.251 C15 J4I 15 J4I C16 C11 C 0 1 Y N N 93.033 -8.020 13.873 -3.323 -1.076 0.197 C16 J4I 16 J4I N17 N3 N 0 1 Y N N 91.355 -9.741 14.207 -3.252 1.273 0.201 N17 J4I 17 J4I C18 C12 C 0 1 Y N N 92.665 -7.404 15.081 -4.704 -1.044 0.083 C18 J4I 18 J4I C19 C13 C 0 1 N N N 94.107 -7.427 13.058 -2.593 -2.392 0.260 C19 J4I 19 J4I C20 C14 C 0 1 Y N N 91.002 -9.183 15.380 -4.564 1.347 0.093 C20 J4I 20 J4I C21 C15 C 0 1 Y N N 91.658 -7.998 15.842 -5.334 0.194 0.027 C21 J4I 21 J4I C22 C16 C 0 1 N N N 93.364 -6.184 15.575 -5.502 -2.320 0.020 C22 J4I 22 J4I C23 C17 C 0 1 N N N 89.919 -9.852 16.180 -5.233 2.696 0.041 C23 J4I 23 J4I O24 O3 O 0 1 N N N 91.331 -7.388 17.044 -6.686 0.275 -0.084 O24 J4I 24 J4I C25 C18 C 0 1 N N N 90.663 -8.180 18.016 -7.436 0.317 1.131 C25 J4I 25 J4I H1 H1 H 0 1 N N N 96.859 -13.224 7.874 5.179 -0.017 -2.378 H1 J4I 26 J4I H2 H2 H 0 1 N N N 96.369 -11.916 10.560 2.290 0.027 -2.703 H2 J4I 27 J4I H3 H3 H 0 1 N N N 91.707 -13.255 7.962 3.847 0.013 2.388 H3 J4I 28 J4I H5 H5 H 0 1 N N N 94.169 -14.709 4.018 8.592 -0.142 1.147 H5 J4I 29 J4I H6 H6 H 0 1 N N N 94.172 -16.017 5.249 7.808 1.454 0.918 H6 J4I 30 J4I H7 H7 H 0 1 N N N 92.954 -9.108 11.426 -0.817 -0.805 0.918 H7 J4I 31 J4I H8 H8 H 0 1 N N N 91.794 -10.421 11.822 -0.786 0.975 0.916 H8 J4I 32 J4I H9 H9 H 0 1 N N N 93.675 -6.701 12.353 -2.501 -2.707 1.300 H9 J4I 33 J4I H10 H10 H 0 1 N N N 94.826 -6.916 13.715 -3.150 -3.144 -0.299 H10 J4I 34 J4I H11 H11 H 0 1 N N N 94.622 -8.221 12.497 -1.600 -2.279 -0.174 H11 J4I 35 J4I H12 H12 H 0 1 N N N 92.843 -5.288 15.207 -5.779 -2.626 1.029 H12 J4I 36 J4I H13 H13 H 0 1 N N N 93.364 -6.182 16.675 -6.404 -2.156 -0.570 H13 J4I 37 J4I H14 H14 H 0 1 N N N 94.401 -6.182 15.208 -4.901 -3.102 -0.444 H14 J4I 38 J4I H15 H15 H 0 1 N N N 89.567 -10.746 15.645 -5.310 3.023 -0.996 H15 J4I 39 J4I H16 H16 H 0 1 N N N 90.317 -10.146 17.162 -6.231 2.623 0.474 H16 J4I 40 J4I H17 H17 H 0 1 N N N 89.081 -9.153 16.318 -4.643 3.417 0.606 H17 J4I 41 J4I H18 H18 H 0 1 N N N 90.467 -7.573 18.912 -8.500 0.381 0.900 H18 J4I 42 J4I H19 H19 H 0 1 N N N 89.710 -8.541 17.602 -7.244 -0.587 1.708 H19 J4I 43 J4I H20 H20 H 0 1 N N N 91.295 -9.039 18.286 -7.138 1.190 1.712 H20 J4I 44 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal J4I C1 C2 DOUB Y N 1 J4I C1 C3 SING Y N 2 J4I C1 N4 SING Y N 3 J4I C2 C5 SING Y N 4 J4I C2 N6 SING Y N 5 J4I C3 C7 DOUB Y N 6 J4I N4 C8 SING Y N 7 J4I C5 C9 DOUB Y N 8 J4I N6 C8 DOUB Y N 9 J4I C7 C9 SING Y N 10 J4I C7 O10 SING N N 11 J4I C8 S11 SING N N 12 J4I C9 O12 SING N N 13 J4I O10 C13 SING N N 14 J4I S11 C14 SING N N 15 J4I O12 C13 SING N N 16 J4I C14 C15 SING N N 17 J4I C15 C16 DOUB Y N 18 J4I C15 N17 SING Y N 19 J4I C16 C18 SING Y N 20 J4I C16 C19 SING N N 21 J4I N17 C20 DOUB Y N 22 J4I C18 C21 DOUB Y N 23 J4I C18 C22 SING N N 24 J4I C20 C21 SING Y N 25 J4I C20 C23 SING N N 26 J4I C21 O24 SING N N 27 J4I O24 C25 SING N N 28 J4I C3 H1 SING N N 29 J4I N4 H2 SING N N 30 J4I C5 H3 SING N N 31 J4I C13 H5 SING N N 32 J4I C13 H6 SING N N 33 J4I C14 H7 SING N N 34 J4I C14 H8 SING N N 35 J4I C19 H9 SING N N 36 J4I C19 H10 SING N N 37 J4I C19 H11 SING N N 38 J4I C22 H12 SING N N 39 J4I C22 H13 SING N N 40 J4I C22 H14 SING N N 41 J4I C23 H15 SING N N 42 J4I C23 H16 SING N N 43 J4I C23 H17 SING N N 44 J4I C25 H18 SING N N 45 J4I C25 H19 SING N N 46 J4I C25 H20 SING N N 47 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor J4I SMILES ACDLabs 12.01 "Cc1c(C)c(OC)c(C)nc1CSc1[NH]c2cc3OCOc3cc2n1" J4I InChI InChI 1.03 "InChI=1S/C18H19N3O3S/c1-9-10(2)17(22-4)11(3)19-14(9)7-25-18-20-12-5-15-16(24-8-23-15)6-13(12)21-18/h5-6H,7-8H2,1-4H3,(H,20,21)" J4I InChIKey InChI 1.03 WCDJVYBGDYQGOC-UHFFFAOYSA-N J4I SMILES_CANONICAL CACTVS 3.385 "COc1c(C)nc(CSc2[nH]c3cc4OCOc4cc3n2)c(C)c1C" J4I SMILES CACTVS 3.385 "COc1c(C)nc(CSc2[nH]c3cc4OCOc4cc3n2)c(C)c1C" J4I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(c(c(nc1CSc2[nH]c3cc4c(cc3n2)OCO4)C)OC)C" J4I SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c(c(c(nc1CSc2[nH]c3cc4c(cc3n2)OCO4)C)OC)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier J4I "SYSTEMATIC NAME" ACDLabs 12.01 "6-{[(5-methoxy-3,4,6-trimethylpyridin-2-yl)methyl]sulfanyl}-2H,5H-[1,3]dioxolo[4,5-f]benzimidazole" J4I "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "6-[(5-methoxy-3,4,6-trimethyl-pyridin-2-yl)methylsulfanyl]-5~{H}-[1,3]dioxolo[4,5-f]benzimidazole" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site J4I "Create component" 2022-02-01 RCSB J4I "Initial release" 2022-10-12 RCSB #