data_J4L # _chem_comp.id J4L _chem_comp.name "1-(3,4-dichlorobenzyl)-8-(((1R,4R)-4-hydroxycyclohexyl)amino)-3,7-dimethyl-3,7-dihydro-1H-purine-2,6-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H23 Cl2 N5 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-04-05 _chem_comp.pdbx_modified_date 2021-08-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 452.334 _chem_comp.one_letter_code ? _chem_comp.three_letter_code J4L _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7EHV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal J4L C2 C1 C 0 1 N N N -52.834 16.627 -3.631 0.773 -2.270 0.377 C2 J4L 1 J4L C4 C2 C 0 1 Y N N -53.215 18.731 -2.751 -1.212 -0.988 0.255 C4 J4L 2 J4L C8 C3 C 0 1 Y N N -54.019 20.326 -1.625 -2.671 0.594 0.546 C8 J4L 3 J4L C5 C4 C 0 1 Y N N -54.205 18.229 -1.975 -0.628 -0.036 1.085 C5 J4L 4 J4L C6 C5 C 0 1 N N N -54.508 16.920 -2.023 0.683 -0.242 1.549 C6 J4L 5 J4L CAA C6 C 0 1 N N R -53.476 22.688 -0.799 -4.953 0.804 -0.350 CAA J4L 6 J4L CAB C7 C 0 1 N N N -54.054 23.910 -1.506 -5.831 1.972 -0.807 CAB J4L 7 J4L CAC C8 C 0 1 N N N -53.420 25.133 -0.896 -6.994 1.438 -1.646 CAC J4L 8 J4L CAD C9 C 0 1 N N R -51.937 25.084 -1.170 -7.829 0.472 -0.804 CAD J4L 9 J4L CAE C10 C 0 1 N N N -51.291 23.824 -0.576 -6.952 -0.696 -0.347 CAE J4L 10 J4L CAF C11 C 0 1 N N N -51.988 22.560 -1.097 -5.789 -0.163 0.492 CAF J4L 11 J4L CAH C12 C 0 1 Y N N -51.354 12.001 -1.295 5.488 0.137 -1.100 CAH J4L 12 J4L CAI C13 C 0 1 Y N N -51.830 13.041 -0.506 4.993 0.897 -0.054 CAI J4L 13 J4L CAJ C14 C 0 1 Y N N -52.757 13.938 -0.998 4.095 0.342 0.840 CAJ J4L 14 J4L CAK C15 C 0 1 Y N N -53.184 13.761 -2.300 3.691 -0.971 0.688 CAK J4L 15 J4L CAL C16 C 0 1 Y N N -52.711 12.718 -3.101 4.185 -1.730 -0.357 CAL J4L 16 J4L CAM C17 C 0 1 Y N N -51.782 11.824 -2.598 5.078 -1.175 -1.254 CAM J4L 17 J4L CAP C18 C 0 1 N N N -54.211 14.711 -2.869 2.713 -1.576 1.661 CAP J4L 18 J4L CAW C19 C 0 1 N N N -51.445 18.471 -4.409 -1.070 -3.131 -0.961 CAW J4L 19 J4L CBC C20 C 0 1 N N N -55.809 19.247 -0.323 -1.421 2.184 2.056 CBC J4L 20 J4L N1 N1 N 0 1 N N N -53.814 16.125 -2.838 1.347 -1.357 1.180 N1 J4L 21 J4L N3 N2 N 0 1 N N N -52.529 17.931 -3.578 -0.480 -2.113 -0.089 N3 J4L 22 J4L N7 N3 N 0 1 Y N N -54.713 19.245 -1.293 -1.575 0.965 1.259 N7 J4L 23 J4L N9 N4 N 0 1 Y N N -53.108 20.040 -2.540 -2.441 -0.562 -0.041 N9 J4L 24 J4L NBD N5 N 0 1 N N N -54.319 21.515 -1.116 -3.840 1.315 0.453 NBD J4L 25 J4L O2 O1 O 0 1 N N N -52.200 15.906 -4.399 1.403 -3.261 0.061 O2 J4L 26 J4L O6 O2 O 0 1 N N N -55.402 16.398 -1.356 1.215 0.578 2.277 O6 J4L 27 J4L OAG O3 O 0 1 N N N -51.366 26.231 -0.571 -8.915 -0.026 -1.587 OAG J4L 28 J4L CL1 CL1 CL 0 0 N N N -50.240 10.969 -0.633 6.615 0.833 -2.222 CL1 J4L 29 J4L CL2 CL2 CL 0 0 N N N -51.255 13.191 1.092 5.500 2.546 0.137 CL2 J4L 30 J4L H1 H1 H 0 1 N N N -53.568 22.874 0.281 -4.562 0.281 -1.223 H1 J4L 31 J4L H2 H2 H 0 1 N N N -55.144 23.943 -1.366 -6.222 2.495 0.066 H2 J4L 32 J4L H3 H3 H 0 1 N N N -53.824 23.865 -2.581 -5.235 2.660 -1.406 H3 J4L 33 J4L H4 H4 H 0 1 N N N -53.852 26.039 -1.346 -7.618 2.270 -1.971 H4 J4L 34 J4L H5 H5 H 0 1 N N N -53.598 25.142 0.190 -6.602 0.915 -2.518 H5 J4L 35 J4L H6 H6 H 0 1 N N N -51.769 25.091 -2.257 -8.220 0.995 0.069 H6 J4L 36 J4L H7 H7 H 0 1 N N N -50.229 23.794 -0.861 -7.547 -1.385 0.252 H7 J4L 37 J4L H8 H8 H 0 1 N N N -51.376 23.857 0.520 -6.560 -1.219 -1.220 H8 J4L 38 J4L H9 H9 H 0 1 N N N -51.580 21.673 -0.590 -5.164 -0.994 0.817 H9 J4L 39 J4L H10 H10 H 0 1 N N N -51.831 22.467 -2.182 -6.180 0.360 1.364 H10 J4L 40 J4L H11 H11 H 0 1 N N N -53.134 14.746 -0.389 3.709 0.934 1.657 H11 J4L 41 J4L H12 H12 H 0 1 N N N -53.071 12.610 -4.114 3.866 -2.755 -0.478 H12 J4L 42 J4L H13 H13 H 0 1 N N N -51.403 11.014 -3.204 5.464 -1.769 -2.070 H13 J4L 43 J4L H14 H14 H 0 1 N N N -55.139 14.602 -2.289 2.901 -2.647 1.747 H14 J4L 44 J4L H15 H15 H 0 1 N N N -54.397 14.429 -3.916 2.834 -1.107 2.637 H15 J4L 45 J4L H16 H16 H 0 1 N N N -51.347 19.551 -4.228 -0.351 -3.935 -1.120 H16 J4L 46 J4L H17 H17 H 0 1 N N N -50.501 17.969 -4.152 -1.968 -3.534 -0.494 H17 J4L 47 J4L H18 H18 H 0 1 N N N -51.675 18.297 -5.470 -1.330 -2.682 -1.920 H18 J4L 48 J4L H19 H19 H 0 1 N N N -55.967 20.269 0.051 -1.751 1.994 3.077 H19 J4L 49 J4L H20 H20 H 0 1 N N N -56.729 18.888 -0.808 -0.373 2.484 2.063 H20 J4L 50 J4L H21 H21 H 0 1 N N N -55.556 18.585 0.518 -2.025 2.981 1.621 H21 J4L 51 J4L H22 H22 H 0 1 N N N -55.002 21.878 -1.750 -3.927 2.161 0.920 H22 J4L 52 J4L H23 H23 H 0 1 N N N -50.428 26.235 -0.723 -9.488 -0.647 -1.116 H23 J4L 53 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal J4L CAW N3 SING N N 1 J4L O2 C2 DOUB N N 2 J4L C2 N3 SING N N 3 J4L C2 N1 SING N N 4 J4L N3 C4 SING N N 5 J4L CAL CAM DOUB Y N 6 J4L CAL CAK SING Y N 7 J4L CAP N1 SING N N 8 J4L CAP CAK SING N N 9 J4L N1 C6 SING N N 10 J4L C4 N9 SING Y N 11 J4L C4 C5 DOUB Y N 12 J4L CAM CAH SING Y N 13 J4L N9 C8 DOUB Y N 14 J4L CAK CAJ DOUB Y N 15 J4L C6 C5 SING N N 16 J4L C6 O6 DOUB N N 17 J4L C5 N7 SING Y N 18 J4L C8 N7 SING Y N 19 J4L C8 NBD SING N N 20 J4L CAB CAC SING N N 21 J4L CAB CAA SING N N 22 J4L CAH CL1 SING N N 23 J4L CAH CAI DOUB Y N 24 J4L N7 CBC SING N N 25 J4L CAD CAC SING N N 26 J4L CAD CAE SING N N 27 J4L CAD OAG SING N N 28 J4L NBD CAA SING N N 29 J4L CAF CAA SING N N 30 J4L CAF CAE SING N N 31 J4L CAJ CAI SING Y N 32 J4L CAI CL2 SING N N 33 J4L CAA H1 SING N N 34 J4L CAB H2 SING N N 35 J4L CAB H3 SING N N 36 J4L CAC H4 SING N N 37 J4L CAC H5 SING N N 38 J4L CAD H6 SING N N 39 J4L CAE H7 SING N N 40 J4L CAE H8 SING N N 41 J4L CAF H9 SING N N 42 J4L CAF H10 SING N N 43 J4L CAJ H11 SING N N 44 J4L CAL H12 SING N N 45 J4L CAM H13 SING N N 46 J4L CAP H14 SING N N 47 J4L CAP H15 SING N N 48 J4L CAW H16 SING N N 49 J4L CAW H17 SING N N 50 J4L CAW H18 SING N N 51 J4L CBC H19 SING N N 52 J4L CBC H20 SING N N 53 J4L CBC H21 SING N N 54 J4L NBD H22 SING N N 55 J4L OAG H23 SING N N 56 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor J4L InChI InChI 1.03 "InChI=1S/C20H23Cl2N5O3/c1-25-16-17(24-19(25)23-12-4-6-13(28)7-5-12)26(2)20(30)27(18(16)29)10-11-3-8-14(21)15(22)9-11/h3,8-9,12-13,28H,4-7,10H2,1-2H3,(H,23,24)/t12-,13-" J4L InChIKey InChI 1.03 AZJJYZNRPSOHRZ-JOCQHMNTSA-N J4L SMILES_CANONICAL CACTVS 3.385 "CN1C(=O)N(Cc2ccc(Cl)c(Cl)c2)C(=O)c3n(C)c(N[C@@H]4CC[C@@H](O)CC4)nc13" J4L SMILES CACTVS 3.385 "CN1C(=O)N(Cc2ccc(Cl)c(Cl)c2)C(=O)c3n(C)c(N[CH]4CC[CH](O)CC4)nc13" J4L SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cn1c2c(nc1NC3CCC(CC3)O)N(C(=O)N(C2=O)Cc4ccc(c(c4)Cl)Cl)C" J4L SMILES "OpenEye OEToolkits" 2.0.7 "Cn1c2c(nc1NC3CCC(CC3)O)N(C(=O)N(C2=O)Cc4ccc(c(c4)Cl)Cl)C" # _pdbx_chem_comp_identifier.comp_id J4L _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "1-[(3,4-dichlorophenyl)methyl]-3,7-dimethyl-8-[(4-oxidanylcyclohexyl)amino]purine-2,6-dione" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site J4L "Create component" 2021-04-05 PDBJ J4L "Initial release" 2021-08-11 RCSB ##