data_J6F # _chem_comp.id J6F _chem_comp.name 7-hexyl-3-methyl-8-sulfanylidene-9H-purine-2,6-dione _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H18 N4 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-08-04 _chem_comp.pdbx_modified_date 2023-07-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 282.362 _chem_comp.one_letter_code ? _chem_comp.three_letter_code J6F _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7YL1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal J6F C4 C1 C 0 1 N N N 4.637 26.767 32.137 -2.184 -0.495 -0.186 C4 J6F 1 J6F C5 C2 C 0 1 N N N 4.811 28.100 31.914 -1.128 0.196 0.343 C5 J6F 2 J6F C6 C3 C 0 1 N N N 5.855 28.752 32.470 -1.262 1.577 0.586 C6 J6F 3 J6F C8 C4 C 0 1 N N N 3.059 27.443 30.857 -0.527 -1.926 0.115 C8 J6F 4 J6F N1 N1 N 0 1 N N N 6.763 28.046 33.272 -2.427 2.190 0.292 N1 J6F 5 J6F N3 N2 N 0 1 N N N 5.501 26.056 32.927 -3.353 0.174 -0.469 N3 J6F 6 J6F CAA C5 C 0 1 N N N 0.338 34.184 33.817 6.855 1.339 -1.189 CAA J6F 7 J6F CAF C6 C 0 1 N N N 1.584 33.679 33.057 5.906 0.958 -0.052 CAF J6F 8 J6F CAG C7 C 0 1 N N N 1.213 32.548 32.092 4.521 0.648 -0.625 CAG J6F 9 J6F CAH C8 C 0 1 N N N 2.498 32.010 31.449 3.572 0.268 0.513 CAH J6F 10 J6F CAI C9 C 0 1 N N N 2.312 30.515 31.159 2.188 -0.042 -0.060 CAI J6F 11 J6F CAJ C10 C 0 1 N N N 3.607 29.903 30.600 1.238 -0.423 1.077 CAJ J6F 12 J6F N7 N3 N 0 1 N N N 3.820 28.511 31.108 -0.087 -0.720 0.529 N7 J6F 13 J6F O6 O1 O 0 1 N N N 6.051 29.958 32.292 -0.334 2.212 1.058 O6 J6F 14 J6F C2 C11 C 0 1 N N N 6.552 26.668 33.498 -3.454 1.494 -0.228 C2 J6F 15 J6F O2 O2 O 0 1 N N N 7.324 26.010 34.207 -4.495 2.069 -0.484 O2 J6F 16 J6F CAB C12 C 0 1 N N N 5.319 24.588 33.170 -4.490 -0.554 -1.037 CAB J6F 17 J6F N9 N4 N 0 1 N N N 3.534 26.370 31.480 -1.793 -1.802 -0.325 N9 J6F 18 J6F S8 S1 S 0 1 N N N 1.652 27.405 29.856 0.379 -3.378 0.144 S8 J6F 19 J6F H1 H1 H 0 1 N N N 7.549 28.512 33.678 -2.525 3.141 0.457 H1 J6F 20 J6F H2 H2 H 0 1 N N N 0.629 34.994 34.502 7.841 1.560 -0.781 H2 J6F 21 J6F H3 H3 H 0 1 N N N -0.403 34.562 33.097 6.930 0.510 -1.893 H3 J6F 22 J6F H4 H4 H 0 1 N N N -0.100 33.356 34.393 6.470 2.219 -1.705 H4 J6F 23 J6F H5 H5 H 0 1 N N N 2.322 33.306 33.782 6.291 0.078 0.464 H5 J6F 24 J6F H6 H6 H 0 1 N N N 2.020 34.512 32.486 5.831 1.787 0.652 H6 J6F 25 J6F H7 H7 H 0 1 N N N 0.541 32.933 31.311 4.136 1.528 -1.140 H7 J6F 26 J6F H8 H8 H 0 1 N N N 0.709 31.741 32.644 4.596 -0.181 -1.328 H8 J6F 27 J6F H9 H9 H 0 1 N N N 3.344 32.151 32.138 3.957 -0.612 1.028 H9 J6F 28 J6F H10 H10 H 0 1 N N N 2.696 32.548 30.510 3.497 1.097 1.216 H10 J6F 29 J6F H11 H11 H 0 1 N N N 1.505 30.388 30.422 1.802 0.838 -0.576 H11 J6F 30 J6F H12 H12 H 0 1 N N N 2.041 29.998 32.091 2.263 -0.871 -0.764 H12 J6F 31 J6F H13 H13 H 0 1 N N N 4.459 30.529 30.905 1.623 -1.303 1.593 H13 J6F 32 J6F H14 H14 H 0 1 N N N 3.545 29.877 29.502 1.163 0.406 1.781 H14 J6F 33 J6F H15 H15 H 0 1 N N N 6.121 24.223 33.829 -5.117 -0.935 -0.230 H15 J6F 34 J6F H16 H16 H 0 1 N N N 4.344 24.414 33.648 -5.075 0.118 -1.665 H16 J6F 35 J6F H17 H17 H 0 1 N N N 5.359 24.050 32.211 -4.126 -1.387 -1.638 H17 J6F 36 J6F H18 H18 H 0 1 N N N 3.147 25.448 31.463 -2.342 -2.521 -0.677 H18 J6F 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal J6F S8 C8 DOUB N N 1 J6F CAJ N7 SING N N 2 J6F CAJ CAI SING N N 3 J6F C8 N7 SING N N 4 J6F C8 N9 SING N N 5 J6F N7 C5 SING N N 6 J6F CAI CAH SING N N 7 J6F CAH CAG SING N N 8 J6F N9 C4 SING N N 9 J6F C5 C4 DOUB N N 10 J6F C5 C6 SING N N 11 J6F CAG CAF SING N N 12 J6F C4 N3 SING N N 13 J6F O6 C6 DOUB N N 14 J6F C6 N1 SING N N 15 J6F N3 CAB SING N N 16 J6F N3 C2 SING N N 17 J6F CAF CAA SING N N 18 J6F N1 C2 SING N N 19 J6F C2 O2 DOUB N N 20 J6F N1 H1 SING N N 21 J6F CAA H2 SING N N 22 J6F CAA H3 SING N N 23 J6F CAA H4 SING N N 24 J6F CAF H5 SING N N 25 J6F CAF H6 SING N N 26 J6F CAG H7 SING N N 27 J6F CAG H8 SING N N 28 J6F CAH H9 SING N N 29 J6F CAH H10 SING N N 30 J6F CAI H11 SING N N 31 J6F CAI H12 SING N N 32 J6F CAJ H13 SING N N 33 J6F CAJ H14 SING N N 34 J6F CAB H15 SING N N 35 J6F CAB H16 SING N N 36 J6F CAB H17 SING N N 37 J6F N9 H18 SING N N 38 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor J6F InChI InChI 1.06 "InChI=1S/C12H18N4O2S/c1-3-4-5-6-7-16-8-9(13-12(16)19)15(2)11(18)14-10(8)17/h3-7H2,1-2H3,(H,13,19)(H,14,17,18)" J6F InChIKey InChI 1.06 UXIHCIYDMGYKSF-UHFFFAOYSA-N J6F SMILES_CANONICAL CACTVS 3.385 "CCCCCCN1C(=S)NC2=C1C(=O)NC(=O)N2C" J6F SMILES CACTVS 3.385 "CCCCCCN1C(=S)NC2=C1C(=O)NC(=O)N2C" J6F SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCCN1C2=C(NC1=S)N(C(=O)NC2=O)C" J6F SMILES "OpenEye OEToolkits" 2.0.7 "CCCCCCN1C2=C(NC1=S)N(C(=O)NC2=O)C" # _pdbx_chem_comp_identifier.comp_id J6F _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "7-hexyl-3-methyl-8-sulfanylidene-9~{H}-purine-2,6-dione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site J6F "Create component" 2022-08-04 PDBJ J6F "Initial release" 2023-07-26 RCSB #