data_J6M # _chem_comp.id J6M _chem_comp.name "2-[2-[[2-methyl-5-[4-(4-methylpiperazin-1-yl)sulfonylphenyl]phenyl]-propyl-amino]-1,3-thiazol-4-yl]pyrimidine-4,6-diamine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H34 N8 O2 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-04-25 _chem_comp.pdbx_modified_date 2023-06-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 578.752 _chem_comp.one_letter_code ? _chem_comp.three_letter_code J6M _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7ZI9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal J6M N1 N1 N 0 1 N N N -12.877 -32.494 10.155 2.496 -1.963 -0.199 N1 J6M 1 J6M N3 N2 N 0 1 Y N N -9.908 -27.494 9.617 6.431 2.522 -0.449 N3 J6M 2 J6M C4 C1 C 0 1 Y N N -11.903 -31.594 10.196 3.145 -0.784 -0.528 C4 J6M 3 J6M C5 C2 C 0 1 Y N N -10.960 -29.609 10.024 4.745 0.783 -0.462 C5 J6M 4 J6M C6 C3 C 0 1 Y N N -11.024 -28.163 9.873 6.017 1.357 0.032 C6 J6M 5 J6M C7 C4 C 0 1 Y N N -9.970 -26.162 9.488 7.569 3.067 -0.029 C7 J6M 6 J6M C8 C5 C 0 1 Y N N -11.176 -25.486 9.524 8.328 2.398 0.927 C8 J6M 7 J6M C10 C6 C 0 1 Y N N -9.836 -30.365 10.162 3.986 1.401 -1.386 C10 J6M 8 J6M C13 C7 C 0 1 Y N N -11.955 -36.010 10.822 -1.116 -2.155 -0.895 C13 J6M 9 J6M C15 C8 C 0 1 Y N N -10.990 -36.525 13.088 -2.398 -0.876 0.820 C15 J6M 10 J6M C17 C9 C 0 1 Y N N -11.272 -38.682 14.074 -4.787 -0.746 0.723 C17 J6M 11 J6M C20 C10 C 0 1 N N N -6.387 -40.152 13.068 -5.681 4.452 -1.916 C20 J6M 12 J6M C21 C11 C 0 1 N N N -6.938 -40.191 15.445 -6.615 2.247 -1.554 C21 J6M 13 J6M C22 C12 C 0 1 N N N -8.251 -39.422 15.372 -7.400 1.392 -0.553 C22 J6M 14 J6M C24 C13 C 0 1 Y N N -12.206 -38.232 11.924 -3.604 -1.992 -0.944 C24 J6M 15 J6M C26 C14 C 0 1 Y N N -12.112 -35.653 8.437 0.078 -3.389 -2.576 C26 J6M 16 J6M C28 C15 C 0 1 N N N -12.702 -33.419 7.495 2.573 -3.561 -2.549 C28 J6M 17 J6M C1 C16 C 0 1 N N N -16.474 -32.013 11.397 3.169 -3.425 3.231 C1 J6M 18 J6M C2 C17 C 0 1 N N N -14.950 -32.120 11.513 2.661 -2.416 2.199 C2 J6M 19 J6M C3 C18 C 0 1 N N N -14.304 -32.110 10.149 3.078 -2.866 0.798 C3 J6M 20 J6M N2 N3 N 0 1 Y N N -12.149 -30.327 10.085 4.269 -0.382 -0.023 N2 J6M 21 J6M N4 N4 N 0 1 N N N -8.840 -25.513 9.254 7.994 4.285 -0.536 N4 J6M 22 J6M C9 C19 C 0 1 Y N N -12.298 -26.265 9.791 7.863 1.177 1.409 C9 J6M 23 J6M N5 N5 N 0 1 N N N -13.487 -25.712 9.922 8.587 0.476 2.362 N5 J6M 24 J6M N6 N6 N 0 1 Y N N -12.218 -27.576 9.975 6.716 0.692 0.943 N6 J6M 25 J6M S1 S1 S 0 1 Y N N -10.237 -32.036 10.299 2.572 0.398 -1.701 S1 J6M 26 J6M C11 C20 C 0 1 Y N N -12.550 -33.856 9.952 1.283 -2.289 -0.813 C11 J6M 27 J6M C12 C21 C 0 1 Y N N -12.298 -34.678 11.032 0.089 -1.828 -0.279 C12 J6M 28 J6M C14 C22 C 0 1 Y N N -11.710 -36.925 11.962 -2.397 -1.665 -0.329 C14 J6M 29 J6M C16 C23 C 0 1 Y N N -10.750 -37.398 14.134 -3.593 -0.423 1.342 C16 J6M 30 J6M S2 S2 S 0 1 N N N -10.905 -39.830 15.361 -6.309 -0.163 1.395 S2 J6M 31 J6M O1 O1 O 0 1 N N N -11.761 -40.953 15.168 -7.317 -1.053 0.935 O1 J6M 32 J6M O2 O2 O 0 1 N N N -10.859 -39.120 16.602 -6.068 0.094 2.771 O2 J6M 33 J6M N7 N7 N 0 1 N N N -9.366 -40.349 15.080 -6.625 1.303 0.694 N7 J6M 34 J6M C18 C24 C 0 1 N N N -9.129 -41.112 13.838 -6.138 2.551 1.301 C18 J6M 35 J6M C19 C25 C 0 1 N N N -7.824 -41.879 13.969 -5.403 3.360 0.227 C19 J6M 36 J6M N8 N8 N 0 1 N N N -6.692 -40.986 14.236 -6.283 3.538 -0.936 N8 J6M 37 J6M C23 C26 C 0 1 Y N N -11.972 -39.114 12.964 -4.792 -1.524 -0.420 C23 J6M 38 J6M C25 C27 C 0 1 Y N N -11.838 -36.476 9.513 -1.116 -2.939 -2.047 C25 J6M 39 J6M C27 C28 C 0 1 Y N N -12.451 -34.320 8.646 1.275 -3.066 -1.966 C27 J6M 40 J6M H1 H1 H 0 1 N N N -11.243 -24.421 9.356 9.257 2.816 1.287 H1 J6M 41 J6M H2 H2 H 0 1 N N N -8.830 -29.971 10.183 4.207 2.348 -1.856 H2 J6M 42 J6M H3 H3 H 0 1 N N N -10.613 -35.515 13.144 -1.466 -0.623 1.303 H3 J6M 43 J6M H4 H4 H 0 1 N N N -5.536 -39.495 13.298 -4.729 4.045 -2.257 H4 J6M 44 J6M H5 H5 H 0 1 N N N -6.132 -40.797 12.214 -6.353 4.566 -2.767 H5 J6M 45 J6M H6 H6 H 0 1 N N N -7.265 -39.540 12.816 -5.515 5.424 -1.452 H6 J6M 46 J6M H7 H7 H 0 1 N N N -6.971 -40.867 16.312 -5.697 1.730 -1.833 H7 J6M 47 J6M H8 H8 H 0 1 N N N -6.114 -39.473 15.571 -7.223 2.416 -2.443 H8 J6M 48 J6M H9 H9 H 0 1 N N N -8.187 -38.667 14.575 -8.365 1.857 -0.352 H9 J6M 49 J6M H10 H10 H 0 1 N N N -8.435 -38.923 16.335 -7.553 0.395 -0.965 H10 J6M 50 J6M H11 H11 H 0 1 N N N -12.781 -38.558 11.070 -3.609 -2.603 -1.835 H11 J6M 51 J6M H12 H12 H 0 1 N N N -12.063 -36.045 7.432 0.076 -3.993 -3.471 H12 J6M 52 J6M H13 H13 H 0 1 N N N -13.768 -33.455 7.227 3.001 -2.790 -3.189 H13 J6M 53 J6M H14 H14 H 0 1 N N N -12.427 -32.390 7.769 3.269 -3.791 -1.742 H14 J6M 54 J6M H15 H15 H 0 1 N N N -12.097 -33.744 6.636 2.388 -4.460 -3.136 H15 J6M 55 J6M H16 H16 H 0 1 N N N -16.920 -32.022 12.402 2.872 -3.104 4.230 H16 J6M 56 J6M H17 H17 H 0 1 N N N -16.738 -31.074 10.888 2.741 -4.405 3.022 H17 J6M 57 J6M H18 H18 H 0 1 N N N -16.858 -32.865 10.817 4.256 -3.484 3.177 H18 J6M 58 J6M H19 H19 H 0 1 N N N -14.693 -33.058 12.026 1.574 -2.357 2.253 H19 J6M 59 J6M H20 H20 H 0 1 N N N -14.572 -31.267 12.097 3.089 -1.436 2.408 H20 J6M 60 J6M H21 H21 H 0 1 N N N -14.387 -31.094 9.735 2.721 -3.881 0.621 H21 J6M 61 J6M H22 H22 H 0 1 N N N -14.849 -32.815 9.503 4.165 -2.844 0.717 H22 J6M 62 J6M H23 H23 H 0 1 N N N -8.083 -26.165 9.210 8.825 4.676 -0.226 H23 J6M 63 J6M H24 H24 H 0 1 N N N -8.910 -25.025 8.384 7.460 4.746 -1.202 H24 J6M 64 J6M H25 H25 H 0 1 N N N -14.159 -26.416 10.150 9.422 0.836 2.697 H25 J6M 65 J6M H26 H26 H 0 1 N N N -13.458 -25.030 10.652 8.257 -0.374 2.693 H26 J6M 66 J6M H27 H27 H 0 1 N N N -12.367 -34.288 12.037 0.094 -1.217 0.611 H27 J6M 67 J6M H28 H28 H 0 1 N N N -10.164 -37.084 14.986 -3.595 0.185 2.234 H28 J6M 68 J6M H29 H29 H 0 1 N N N -9.065 -40.419 12.986 -6.981 3.127 1.680 H29 J6M 69 J6M H30 H30 H 0 1 N N N -9.957 -41.818 13.675 -5.453 2.318 2.117 H30 J6M 70 J6M H31 H31 H 0 1 N N N -7.914 -42.597 14.798 -5.131 4.336 0.630 H31 J6M 71 J6M H32 H32 H 0 1 N N N -7.635 -42.423 13.032 -4.502 2.828 -0.077 H32 J6M 72 J6M H34 H34 H 0 1 N N N -12.333 -40.130 12.909 -5.728 -1.776 -0.897 H34 J6M 73 J6M H35 H35 H 0 1 N N N -11.529 -37.496 9.337 -2.049 -3.194 -2.527 H35 J6M 74 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal J6M C28 C27 SING N N 1 J6M C26 C27 DOUB Y N 2 J6M C26 C25 SING Y N 3 J6M C27 C11 SING Y N 4 J6M N4 C7 SING N N 5 J6M C7 C8 DOUB Y N 6 J6M C7 N3 SING Y N 7 J6M C25 C13 DOUB Y N 8 J6M C8 C9 SING Y N 9 J6M N3 C6 DOUB Y N 10 J6M C9 N5 SING N N 11 J6M C9 N6 DOUB Y N 12 J6M C6 N6 SING Y N 13 J6M C6 C5 SING N N 14 J6M C11 N1 SING N N 15 J6M C11 C12 DOUB Y N 16 J6M C5 N2 SING Y N 17 J6M C5 C10 DOUB Y N 18 J6M N2 C4 DOUB Y N 19 J6M C3 N1 SING N N 20 J6M C3 C2 SING N N 21 J6M N1 C4 SING N N 22 J6M C10 S1 SING Y N 23 J6M C4 S1 SING Y N 24 J6M C13 C12 SING Y N 25 J6M C13 C14 SING N N 26 J6M C1 C2 SING N N 27 J6M C24 C14 DOUB Y N 28 J6M C24 C23 SING Y N 29 J6M C14 C15 SING Y N 30 J6M C23 C17 DOUB Y N 31 J6M C20 N8 SING N N 32 J6M C15 C16 DOUB Y N 33 J6M C18 C19 SING N N 34 J6M C18 N7 SING N N 35 J6M C19 N8 SING N N 36 J6M C17 C16 SING Y N 37 J6M C17 S2 SING N N 38 J6M N8 C21 SING N N 39 J6M N7 S2 SING N N 40 J6M N7 C22 SING N N 41 J6M O1 S2 DOUB N N 42 J6M S2 O2 DOUB N N 43 J6M C22 C21 SING N N 44 J6M C8 H1 SING N N 45 J6M C10 H2 SING N N 46 J6M C15 H3 SING N N 47 J6M C20 H4 SING N N 48 J6M C20 H5 SING N N 49 J6M C20 H6 SING N N 50 J6M C21 H7 SING N N 51 J6M C21 H8 SING N N 52 J6M C22 H9 SING N N 53 J6M C22 H10 SING N N 54 J6M C24 H11 SING N N 55 J6M C26 H12 SING N N 56 J6M C28 H13 SING N N 57 J6M C28 H14 SING N N 58 J6M C28 H15 SING N N 59 J6M C1 H16 SING N N 60 J6M C1 H17 SING N N 61 J6M C1 H18 SING N N 62 J6M C2 H19 SING N N 63 J6M C2 H20 SING N N 64 J6M C3 H21 SING N N 65 J6M C3 H22 SING N N 66 J6M N4 H23 SING N N 67 J6M N4 H24 SING N N 68 J6M N5 H25 SING N N 69 J6M N5 H26 SING N N 70 J6M C12 H27 SING N N 71 J6M C16 H28 SING N N 72 J6M C18 H29 SING N N 73 J6M C18 H30 SING N N 74 J6M C19 H31 SING N N 75 J6M C19 H32 SING N N 76 J6M C23 H34 SING N N 77 J6M C25 H35 SING N N 78 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor J6M InChI InChI 1.06 "InChI=1S/C28H34N8O2S2/c1-4-11-36(28-31-23(18-39-28)27-32-25(29)17-26(30)33-27)24-16-21(6-5-19(24)2)20-7-9-22(10-8-20)40(37,38)35-14-12-34(3)13-15-35/h5-10,16-18H,4,11-15H2,1-3H3,(H4,29,30,32,33)" J6M InChIKey InChI 1.06 RGXHYCWMXZHIKK-UHFFFAOYSA-N J6M SMILES_CANONICAL CACTVS 3.385 "CCCN(c1scc(n1)c2nc(N)cc(N)n2)c3cc(ccc3C)c4ccc(cc4)[S](=O)(=O)N5CCN(C)CC5" J6M SMILES CACTVS 3.385 "CCCN(c1scc(n1)c2nc(N)cc(N)n2)c3cc(ccc3C)c4ccc(cc4)[S](=O)(=O)N5CCN(C)CC5" J6M SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCN(c1cc(ccc1C)c2ccc(cc2)S(=O)(=O)N3CCN(CC3)C)c4nc(cs4)c5nc(cc(n5)N)N" J6M SMILES "OpenEye OEToolkits" 2.0.7 "CCCN(c1cc(ccc1C)c2ccc(cc2)S(=O)(=O)N3CCN(CC3)C)c4nc(cs4)c5nc(cc(n5)N)N" # _pdbx_chem_comp_identifier.comp_id J6M _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[2-[[2-methyl-5-[4-(4-methylpiperazin-1-yl)sulfonylphenyl]phenyl]-propyl-amino]-1,3-thiazol-4-yl]pyrimidine-4,6-diamine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site J6M "Create component" 2022-04-25 PDBE J6M "Modify descriptor" 2022-08-22 RCSB J6M "Initial release" 2023-06-07 RCSB #