data_J98 # _chem_comp.id J98 _chem_comp.name "2-[2-[[2-methyl-5-[4-(4-methylpiperazin-1-yl)sulfonyl-2-(trifluoromethyl)phenyl]phenyl]-propyl-amino]-1,3-thiazol-4-yl]pyrimidine-4,6-diamine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H33 F3 N8 O2 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-04-25 _chem_comp.pdbx_modified_date 2023-06-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 646.750 _chem_comp.one_letter_code ? _chem_comp.three_letter_code J98 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7ZI3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal J98 N1 N1 N 0 1 N N N -12.534 -32.749 10.047 2.750 -1.032 -1.328 N1 J98 1 J98 N3 N2 N 0 1 Y N N -12.185 -27.659 9.874 7.590 0.896 1.591 N3 J98 2 J98 C4 C1 C 0 1 Y N N -11.670 -31.732 10.039 3.649 -0.688 -0.331 C4 J98 3 J98 C5 C2 C 0 1 Y N N -10.888 -29.666 9.902 5.557 0.084 0.555 C5 J98 4 J98 C6 C3 C 0 1 Y N N -10.983 -28.218 9.777 6.920 0.655 0.471 C6 J98 5 J98 C7 C4 C 0 1 Y N N -12.294 -26.337 9.777 8.816 1.409 1.554 C7 J98 6 J98 C8 C5 C 0 1 Y N N -11.194 -25.532 9.506 9.396 1.693 0.319 C8 J98 7 J98 C10 C6 C 0 1 Y N N -9.724 -30.340 10.114 4.966 -0.202 1.730 C10 J98 8 J98 C13 C7 C 0 1 Y N N -11.024 -35.922 11.332 -0.819 -1.248 -0.440 C13 J98 9 J98 C15 C8 C 0 1 Y N N -9.270 -36.014 13.105 -2.404 0.507 -1.229 C15 J98 10 J98 C17 C9 C 0 1 Y N N -9.566 -37.235 15.149 -4.145 1.324 0.198 C17 J98 11 J98 C20 C10 C 0 1 N N N -7.505 -41.955 14.376 -8.816 -1.823 -1.551 C20 J98 12 J98 C21 C11 C 0 1 N N N -6.395 -40.676 16.138 -7.826 -0.654 0.324 C21 J98 13 J98 C22 C12 C 0 1 N N N -7.053 -39.328 15.877 -7.626 0.733 0.943 C22 J98 14 J98 C24 C13 C 0 1 Y N N -11.304 -37.242 13.472 -2.645 -0.359 1.007 C24 J98 15 J98 C26 C14 C 0 1 Y N N -10.994 -36.651 10.152 -0.970 -2.628 -0.313 C26 J98 16 J98 C28 C15 C 0 1 Y N N -11.984 -34.823 8.900 1.342 -2.936 -0.855 C28 J98 17 J98 C1 C16 C 0 1 N N N -16.100 -31.998 11.268 3.055 0.743 -4.663 C1 J98 18 J98 C2 C17 C 0 1 N N N -14.606 -32.242 11.375 2.679 0.549 -3.193 C2 J98 19 J98 C3 C18 C 0 1 N N N -13.990 -32.497 10.010 3.109 -0.846 -2.736 C3 J98 20 J98 N2 N3 N 0 1 Y N N -12.002 -30.491 9.793 4.828 -0.185 -0.529 N2 J98 21 J98 N4 N4 N 0 1 N N N -13.515 -25.828 9.908 9.509 1.658 2.728 N4 J98 22 J98 C9 C19 C 0 1 Y N N -9.967 -26.187 9.411 8.663 1.427 -0.834 C9 J98 23 J98 N5 N5 N 0 1 N N N -8.853 -25.511 9.157 9.200 1.693 -2.084 N5 J98 24 J98 N6 N6 N 0 1 Y N N -9.876 -27.523 9.512 7.441 0.913 -0.722 N6 J98 25 J98 S1 S1 S 0 1 Y N N -9.982 -32.033 10.240 3.364 -0.858 1.398 S1 J98 26 J98 C11 C20 C 0 1 Y N N -12.053 -34.095 10.084 1.501 -1.562 -0.990 C11 J98 27 J98 C12 C21 C 0 1 Y N N -11.534 -34.627 11.273 0.421 -0.716 -0.783 C12 J98 28 J98 C14 C22 C 0 1 Y N N -10.508 -36.450 12.634 -1.978 -0.349 -0.216 C14 J98 29 J98 C16 C23 C 0 1 Y N N -8.790 -36.412 14.342 -3.483 1.341 -1.016 C16 J98 30 J98 S2 S2 S 0 1 N N N -8.992 -37.742 16.756 -5.522 2.390 0.463 S2 J98 31 J98 O1 O1 O 0 1 N N N -7.938 -36.877 17.209 -5.629 2.566 1.869 O1 J98 32 J98 O2 O2 O 0 1 N N N -10.152 -37.921 17.570 -5.372 3.472 -0.446 O2 J98 33 J98 N7 N7 N 0 1 N N N -8.334 -39.236 16.609 -6.878 1.567 -0.010 N7 J98 34 J98 C18 C24 C 0 1 N N N -9.252 -40.335 16.268 -7.366 1.648 -1.395 C18 J98 35 J98 C19 C25 C 0 1 N N N -8.554 -41.655 16.563 -7.577 0.225 -1.922 C19 J98 36 J98 N8 N8 N 0 1 N N N -7.293 -41.791 15.822 -8.450 -0.512 -0.998 N8 J98 37 J98 C23 C26 C 0 1 Y N N -10.813 -37.641 14.715 -3.730 0.471 1.205 C23 J98 38 J98 C25 C27 C 0 1 N N N -12.680 -37.649 13.050 -2.194 -1.287 2.105 C25 J98 39 J98 F1 F1 F 0 1 N N N -13.309 -38.342 13.994 -2.924 -1.022 3.269 F1 J98 40 J98 F2 F2 F 0 1 N N N -13.469 -36.622 12.772 -2.407 -2.612 1.712 F2 J98 41 J98 F3 F3 F 0 1 N N N -12.717 -38.367 11.942 -0.832 -1.087 2.354 F3 J98 42 J98 C27 C28 C 0 1 Y N N -11.461 -36.117 8.961 0.110 -3.463 -0.521 C27 J98 43 J98 C29 C29 C 0 1 N N N -12.475 -34.249 7.618 2.516 -3.854 -1.082 C29 J98 44 J98 H1 H1 H 0 1 N N N -11.284 -24.464 9.377 10.390 2.110 0.259 H1 J98 45 J98 H2 H2 H 0 1 N N N -8.756 -29.867 10.193 5.399 -0.055 2.708 H2 J98 46 J98 H3 H3 H 0 1 N N N -8.674 -35.353 12.493 -1.888 0.522 -2.178 H3 J98 47 J98 H4 H4 H 0 1 N N N -8.184 -42.802 14.198 -9.523 -2.315 -0.882 H4 J98 48 J98 H5 H5 H 0 1 N N N -7.949 -41.037 13.964 -9.276 -1.689 -2.530 H5 J98 49 J98 H6 H6 H 0 1 N N N -6.540 -42.148 13.884 -7.922 -2.438 -1.651 H6 J98 50 J98 H7 H7 H 0 1 N N N -6.114 -40.735 17.200 -6.861 -1.149 0.220 H7 J98 51 J98 H8 H8 H 0 1 N N N -5.492 -40.758 15.515 -8.472 -1.250 0.969 H8 J98 52 J98 H9 H9 H 0 1 N N N -6.382 -38.524 16.216 -8.596 1.188 1.144 H9 J98 53 J98 H10 H10 H 0 1 N N N -7.242 -39.218 14.799 -7.062 0.642 1.871 H10 J98 54 J98 H11 H11 H 0 1 N N N -10.598 -37.656 10.161 -1.932 -3.043 -0.051 H11 J98 55 J98 H12 H12 H 0 1 N N N -16.515 -31.817 12.270 4.134 0.640 -4.779 H12 J98 56 J98 H13 H13 H 0 1 N N N -16.283 -31.120 10.631 2.551 -0.009 -5.269 H13 J98 57 J98 H14 H14 H 0 1 N N N -16.585 -32.880 10.824 2.748 1.738 -4.988 H14 J98 58 J98 H15 H15 H 0 1 N N N -14.431 -33.118 12.017 3.184 1.302 -2.586 H15 J98 59 J98 H16 H16 H 0 1 N N N -14.130 -31.358 11.824 1.600 0.653 -3.077 H16 J98 60 J98 H17 H17 H 0 1 N N N -14.173 -31.616 9.378 4.188 -0.950 -2.852 H17 J98 61 J98 H18 H18 H 0 1 N N N -14.482 -33.375 9.567 2.605 -1.598 -3.342 H18 J98 62 J98 H19 H19 H 0 1 N N N -14.170 -26.567 10.064 9.100 1.459 3.585 H19 J98 63 J98 H20 H20 H 0 1 N N N -13.532 -25.198 10.684 10.404 2.033 2.694 H20 J98 64 J98 H21 H21 H 0 1 N N N -8.086 -26.148 9.079 10.092 2.067 -2.159 H21 J98 65 J98 H22 H22 H 0 1 N N N -8.957 -25.008 8.299 8.684 1.505 -2.884 H22 J98 66 J98 H23 H23 H 0 1 N N N -11.530 -34.018 12.165 0.542 0.352 -0.887 H23 J98 67 J98 H24 H24 H 0 1 N N N -7.817 -36.084 14.678 -3.811 2.009 -1.799 H24 J98 68 J98 H25 H25 H 0 1 N N N -9.513 -40.283 15.201 -8.311 2.191 -1.419 H25 J98 69 J98 H26 H26 H 0 1 N N N -10.167 -40.256 16.873 -6.630 2.162 -2.013 H26 J98 70 J98 H27 H27 H 0 1 N N N -9.223 -42.481 16.279 -8.042 0.267 -2.907 H27 J98 71 J98 H28 H28 H 0 1 N N N -8.340 -41.710 17.641 -6.615 -0.282 -1.996 H28 J98 72 J98 H30 H30 H 0 1 N N N -11.416 -38.276 15.347 -4.247 0.465 2.153 H30 J98 73 J98 H31 H31 H 0 1 N N N -11.420 -36.714 8.062 -0.009 -4.532 -0.418 H31 J98 74 J98 H32 H32 H 0 1 N N N -13.541 -34.490 7.492 2.556 -4.140 -2.133 H32 J98 75 J98 H33 H33 H 0 1 N N N -12.345 -33.157 7.632 3.437 -3.339 -0.810 H33 J98 76 J98 H34 H34 H 0 1 N N N -11.902 -34.676 6.782 2.403 -4.747 -0.466 H34 J98 77 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal J98 C29 C28 SING N N 1 J98 C28 C27 DOUB Y N 2 J98 C28 C11 SING Y N 3 J98 C27 C26 SING Y N 4 J98 N5 C9 SING N N 5 J98 C9 C8 DOUB Y N 6 J98 C9 N6 SING Y N 7 J98 C8 C7 SING Y N 8 J98 N6 C6 DOUB Y N 9 J98 C7 N3 DOUB Y N 10 J98 C7 N4 SING N N 11 J98 C6 N3 SING Y N 12 J98 C6 C5 SING N N 13 J98 N2 C5 SING Y N 14 J98 N2 C4 DOUB Y N 15 J98 C5 C10 DOUB Y N 16 J98 C3 N1 SING N N 17 J98 C3 C2 SING N N 18 J98 C4 N1 SING N N 19 J98 C4 S1 SING Y N 20 J98 N1 C11 SING N N 21 J98 C11 C12 DOUB Y N 22 J98 C10 S1 SING Y N 23 J98 C26 C13 DOUB Y N 24 J98 C1 C2 SING N N 25 J98 C12 C13 SING Y N 26 J98 C13 C14 SING N N 27 J98 F3 C25 SING N N 28 J98 C14 C15 DOUB Y N 29 J98 C14 C24 SING Y N 30 J98 F2 C25 SING N N 31 J98 C25 C24 SING N N 32 J98 C25 F1 SING N N 33 J98 C15 C16 SING Y N 34 J98 C24 C23 DOUB Y N 35 J98 C16 C17 DOUB Y N 36 J98 C20 N8 SING N N 37 J98 C23 C17 SING Y N 38 J98 C17 S2 SING N N 39 J98 N8 C21 SING N N 40 J98 N8 C19 SING N N 41 J98 C22 C21 SING N N 42 J98 C22 N7 SING N N 43 J98 C18 C19 SING N N 44 J98 C18 N7 SING N N 45 J98 N7 S2 SING N N 46 J98 S2 O1 DOUB N N 47 J98 S2 O2 DOUB N N 48 J98 C8 H1 SING N N 49 J98 C10 H2 SING N N 50 J98 C15 H3 SING N N 51 J98 C20 H4 SING N N 52 J98 C20 H5 SING N N 53 J98 C20 H6 SING N N 54 J98 C21 H7 SING N N 55 J98 C21 H8 SING N N 56 J98 C22 H9 SING N N 57 J98 C22 H10 SING N N 58 J98 C26 H11 SING N N 59 J98 C1 H12 SING N N 60 J98 C1 H13 SING N N 61 J98 C1 H14 SING N N 62 J98 C2 H15 SING N N 63 J98 C2 H16 SING N N 64 J98 C3 H17 SING N N 65 J98 C3 H18 SING N N 66 J98 N4 H19 SING N N 67 J98 N4 H20 SING N N 68 J98 N5 H21 SING N N 69 J98 N5 H22 SING N N 70 J98 C12 H23 SING N N 71 J98 C16 H24 SING N N 72 J98 C18 H25 SING N N 73 J98 C18 H26 SING N N 74 J98 C19 H27 SING N N 75 J98 C19 H28 SING N N 76 J98 C23 H30 SING N N 77 J98 C27 H31 SING N N 78 J98 C29 H32 SING N N 79 J98 C29 H33 SING N N 80 J98 C29 H34 SING N N 81 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor J98 InChI InChI 1.06 "InChI=1S/C29H33F3N8O2S2/c1-4-9-40(28-35-23(17-43-28)27-36-25(33)16-26(34)37-27)24-14-19(6-5-18(24)2)21-8-7-20(15-22(21)29(30,31)32)44(41,42)39-12-10-38(3)11-13-39/h5-8,14-17H,4,9-13H2,1-3H3,(H4,33,34,36,37)" J98 InChIKey InChI 1.06 MBWMCTDCERPQCK-UHFFFAOYSA-N J98 SMILES_CANONICAL CACTVS 3.385 "CCCN(c1scc(n1)c2nc(N)cc(N)n2)c3cc(ccc3C)c4ccc(cc4C(F)(F)F)[S](=O)(=O)N5CCN(C)CC5" J98 SMILES CACTVS 3.385 "CCCN(c1scc(n1)c2nc(N)cc(N)n2)c3cc(ccc3C)c4ccc(cc4C(F)(F)F)[S](=O)(=O)N5CCN(C)CC5" J98 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCN(c1cc(ccc1C)c2ccc(cc2C(F)(F)F)S(=O)(=O)N3CCN(CC3)C)c4nc(cs4)c5nc(cc(n5)N)N" J98 SMILES "OpenEye OEToolkits" 2.0.7 "CCCN(c1cc(ccc1C)c2ccc(cc2C(F)(F)F)S(=O)(=O)N3CCN(CC3)C)c4nc(cs4)c5nc(cc(n5)N)N" # _pdbx_chem_comp_identifier.comp_id J98 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[2-[[2-methyl-5-[4-(4-methylpiperazin-1-yl)sulfonyl-2-(trifluoromethyl)phenyl]phenyl]-propyl-amino]-1,3-thiazol-4-yl]pyrimidine-4,6-diamine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site J98 "Create component" 2022-04-25 PDBE J98 "Modify descriptor" 2022-08-22 RCSB J98 "Initial release" 2023-06-07 RCSB #