data_J9A # _chem_comp.id J9A _chem_comp.name "N-[(2S)-2-amino-2-carboxyethyl]-L-alpha-glutamine" _chem_comp.type "L-peptide linking" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C8 H15 N3 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-08-24 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 233.222 _chem_comp.one_letter_code ? _chem_comp.three_letter_code J9A _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6M7Y _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal J9A O01 O01 O 0 1 N N N N N N 31.587 114.991 161.237 4.033 -1.775 0.901 O01 J9A 1 J9A C02 C02 C 0 1 N N N N N N 32.644 114.301 161.350 4.482 -1.074 0.026 C02 J9A 2 J9A C03 C03 C 0 1 N N N N N N 34.006 114.996 161.348 3.655 0.055 -0.534 C03 J9A 3 J9A C04 C04 C 0 1 N N N N N N 34.759 114.928 162.663 2.300 0.094 0.175 C04 J9A 4 J9A C05 C05 C 0 1 N N S N N N 35.091 116.284 163.297 1.461 1.240 -0.393 C05 J9A 5 J9A C06 C06 C 0 1 N N N N N N 34.686 117.516 162.461 0.083 1.204 0.216 C06 J9A 6 J9A N07 N07 N 0 1 N N N N N N 35.313 117.797 161.171 -0.839 0.340 -0.254 N07 J9A 7 J9A C08 C08 C 0 1 N N N N N N 34.932 118.954 160.376 -2.179 0.304 0.338 C08 J9A 8 J9A CA C09 C 0 1 N N S Y N N 36.176 119.638 159.811 -3.023 -0.755 -0.374 C09 J9A 9 J9A N N10 N 0 1 N N N Y Y N 36.814 118.815 158.785 -3.028 -0.487 -1.818 N10 J9A 10 J9A C C11 C 0 1 N N N Y N Y 37.162 119.944 160.948 -4.435 -0.708 0.151 C11 J9A 11 J9A O O12 O 0 1 N N N Y N Y 37.924 119.035 161.391 -5.294 -0.138 -0.479 O12 J9A 12 J9A O14 O14 O 0 1 N N N N N N 33.867 118.268 162.886 -0.197 1.951 1.130 O14 J9A 13 J9A N15 N15 N 0 1 N N N N N N 34.427 116.318 164.591 2.103 2.522 -0.074 N15 J9A 14 J9A O16 O16 O 0 1 N N N N N N 32.591 113.039 161.452 5.719 -1.297 -0.445 O16 J9A 15 J9A H1 H1 H 0 1 N N N N N N 34.629 114.525 160.573 4.176 1.000 -0.375 H1 J9A 16 J9A H10 H2 H 0 1 N N N N N N 33.849 116.056 161.099 3.503 -0.101 -1.602 H2 J9A 17 J9A H3 H3 H 0 1 N N N N N N 34.145 114.360 163.377 1.780 -0.850 0.016 H3 J9A 18 J9A H4 H4 H 0 1 N N N N N N 35.705 114.395 162.486 2.453 0.250 1.243 H4 J9A 19 J9A H5 H5 H 0 1 N N N N N N 36.179 116.327 163.453 1.383 1.132 -1.475 H5 J9A 20 J9A H6 H6 H 0 1 N N N N N N 36.020 117.180 160.827 -0.616 -0.257 -0.985 H6 J9A 21 J9A H7 H7 H 0 1 N N N N N N 34.382 119.665 161.010 -2.102 0.056 1.397 H7 J9A 22 J9A H8 H8 H 0 1 N N N N N N 34.288 118.628 159.546 -2.651 1.280 0.227 H8 J9A 23 J9A HA H9 H 0 1 N N N Y N N 35.867 120.593 159.362 -2.599 -1.742 -0.189 H9 J9A 24 J9A H H10 H 0 1 N N N Y Y N 37.623 119.287 158.434 -3.417 0.423 -2.016 H10 J9A 25 J9A H2 H11 H 0 1 N Y N Y Y N 37.085 117.938 159.182 -2.101 -0.577 -2.206 H11 J9A 26 J9A H14 H14 H 0 1 N N N N N N 34.695 115.516 165.125 1.602 3.292 -0.493 H14 J9A 27 J9A H15 H15 H 0 1 N N N N N N 34.693 117.149 165.080 2.187 2.646 0.924 H15 J9A 28 J9A H17 H17 H 0 1 N N N N N N 31.684 112.757 161.428 6.213 -2.030 -0.052 H17 J9A 29 J9A OXT O1 O 0 1 N Y N Y N Y ? ? ? -4.738 -1.299 1.317 O1 J9A 30 J9A HXT H12 H 0 1 N Y N Y N Y ? ? ? -5.656 -1.242 1.613 H12 J9A 31 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal J9A N CA SING N N 1 J9A CA C08 SING N N 2 J9A CA C SING N N 3 J9A C08 N07 SING N N 4 J9A C O DOUB N N 5 J9A N07 C06 SING N N 6 J9A O01 C02 DOUB N N 7 J9A C03 C02 SING N N 8 J9A C03 C04 SING N N 9 J9A C02 O16 SING N N 10 J9A C06 O14 DOUB N N 11 J9A C06 C05 SING N N 12 J9A C04 C05 SING N N 13 J9A C05 N15 SING N N 14 J9A C03 H1 SING N N 15 J9A C03 H10 SING N N 16 J9A C04 H3 SING N N 17 J9A C04 H4 SING N N 18 J9A C05 H5 SING N N 19 J9A N07 H6 SING N N 20 J9A C08 H7 SING N N 21 J9A C08 H8 SING N N 22 J9A CA HA SING N N 23 J9A N H SING N N 24 J9A N H2 SING N N 25 J9A N15 H14 SING N N 26 J9A N15 H15 SING N N 27 J9A O16 H17 SING N N 28 J9A C OXT SING N N 29 J9A OXT HXT SING N N 30 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor J9A SMILES ACDLabs 12.01 "O=C(O)CCC(N)C(=O)NCC(C(=O)O)N" J9A InChI InChI 1.03 "InChI=1S/C8H15N3O5/c9-4(1-2-6(12)13)7(14)11-3-5(10)8(15)16/h4-5H,1-3,9-10H2,(H,11,14)(H,12,13)(H,15,16)/t4-,5-/m0/s1" J9A InChIKey InChI 1.03 RPRHUASTZXFZKO-WHFBIAKZSA-N J9A SMILES_CANONICAL CACTVS 3.385 "N[C@@H](CCC(O)=O)C(=O)NC[C@H](N)C(O)=O" J9A SMILES CACTVS 3.385 "N[CH](CCC(O)=O)C(=O)NC[CH](N)C(O)=O" J9A SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C(CC(=O)O)[C@@H](C(=O)NC[C@@H](C(=O)O)N)N" J9A SMILES "OpenEye OEToolkits" 2.0.6 "C(CC(=O)O)C(C(=O)NCC(C(=O)O)N)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier J9A "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(2S)-2-amino-2-carboxyethyl]-L-alpha-glutamine" J9A "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(4~{S})-4-azanyl-5-[[(2~{S})-2-azanyl-3-oxidanyl-3-oxidanylidene-propyl]amino]-5-oxidanylidene-pentanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site J9A "Create component" 2018-08-24 RCSB J9A "Modify linking type" 2018-08-24 RCSB J9A "Initial release" 2019-08-14 RCSB J9A "Modify backbone" 2023-11-03 PDBE #