data_J9D # _chem_comp.id J9D _chem_comp.name "4-({4-amino-6-[4-(2-hydroxyethyl)-1H-imidazol-1-yl]pyrimidin-2-yl}amino)benzonitrile" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H15 N7 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-08-24 _chem_comp.pdbx_modified_date 2018-08-31 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 321.337 _chem_comp.one_letter_code ? _chem_comp.three_letter_code J9D _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6M9H _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal J9D C10 C1 C 0 1 Y N N -8.293 16.732 18.792 -0.535 2.238 0.063 C10 J9D 1 J9D C13 C2 C 0 1 Y N N -8.829 14.700 19.928 1.385 0.818 0.182 C13 J9D 2 J9D C15 C3 C 0 1 Y N N -9.325 12.730 21.112 3.718 1.601 0.168 C15 J9D 3 J9D C17 C4 C 0 1 Y N N -7.450 11.674 20.953 4.743 -0.295 0.308 C17 J9D 4 J9D C21 C5 C 0 1 Y N N -7.340 12.898 20.302 3.425 -0.572 0.300 C21 J9D 5 J9D C24 C6 C 0 1 Y N N -13.904 14.325 21.642 -4.823 0.110 -0.877 C24 J9D 6 J9D C02 C7 C 0 1 N N N -16.412 14.113 21.896 -7.112 -0.577 -0.326 C02 J9D 7 J9D C03 C8 C 0 1 Y N N -15.168 14.765 21.300 -5.695 -0.727 -0.175 C03 J9D 8 J9D C04 C9 C 0 1 Y N N -15.329 15.806 20.402 -5.182 -1.712 0.674 C04 J9D 9 J9D C05 C10 C 0 1 Y N N -14.221 16.417 19.848 -3.821 -1.854 0.816 C05 J9D 10 J9D C06 C11 C 0 1 Y N N -12.949 15.986 20.182 -2.955 -1.019 0.116 C06 J9D 11 J9D C08 C12 C 0 1 Y N N -10.444 16.262 19.484 -0.752 -0.055 0.205 C08 J9D 12 J9D C12 C13 C 0 1 Y N N -7.888 15.504 19.303 0.851 2.098 0.093 C12 J9D 13 J9D C18 C14 C 0 1 N N N -6.375 10.589 21.087 5.857 -1.306 0.389 C18 J9D 14 J9D C19 C15 C 0 1 N N N -5.024 10.928 20.454 6.807 -1.114 -0.795 C19 J9D 15 J9D C23 C16 C 0 1 Y N N -12.792 14.937 21.092 -3.462 -0.041 -0.734 C23 J9D 16 J9D N01 N1 N 0 1 N N N -17.345 13.641 22.326 -8.235 -0.457 -0.446 N01 J9D 17 J9D N07 N2 N 0 1 N N N -11.827 16.686 19.563 -1.577 -1.166 0.263 N07 J9D 18 J9D N09 N3 N 0 1 Y N N -9.566 17.062 18.885 -1.297 1.149 0.120 N09 J9D 19 J9D N11 N4 N 0 1 N N N -7.330 17.611 18.146 -1.112 3.496 -0.020 N11 J9D 20 J9D N14 N5 N 0 1 Y N N -8.509 13.518 20.427 2.768 0.630 0.214 N14 J9D 21 J9D N16 N6 N 0 1 Y N N -8.685 11.617 21.439 4.892 1.036 0.221 N16 J9D 22 J9D N22 N7 N 0 1 Y N N -10.078 15.115 19.980 0.561 -0.224 0.235 N22 J9D 23 J9D O20 O1 O 0 1 N N N -5.179 11.183 19.078 7.864 -2.073 -0.718 O20 J9D 24 J9D H1 H1 H 0 1 N N N -10.350 12.959 21.364 3.532 2.662 0.094 H1 J9D 25 J9D H2 H2 H 0 1 N N N -6.467 13.275 19.790 2.973 -1.551 0.354 H2 J9D 26 J9D H3 H3 H 0 1 N N N -13.784 13.506 22.336 -5.216 0.871 -1.534 H3 J9D 27 J9D H4 H4 H 0 1 N N N -16.321 16.140 20.135 -5.854 -2.360 1.218 H4 J9D 28 J9D H5 H5 H 0 1 N N N -14.348 17.233 19.152 -3.424 -2.612 1.476 H5 J9D 29 J9D H6 H6 H 0 1 N N N -6.861 15.183 19.215 1.496 2.963 0.047 H6 J9D 30 J9D H7 H7 H 0 1 N N N -6.754 9.674 20.609 6.406 -1.167 1.321 H7 J9D 31 J9D H8 H8 H 0 1 N N N -6.211 10.403 22.159 5.438 -2.311 0.360 H8 J9D 32 J9D H9 H9 H 0 1 N N N -4.336 10.080 20.591 6.258 -1.253 -1.727 H9 J9D 33 J9D H10 H10 H 0 1 N N N -4.608 11.821 20.944 7.226 -0.108 -0.767 H10 J9D 34 J9D H11 H11 H 0 1 N N N -11.802 14.604 21.366 -2.788 0.605 -1.276 H11 J9D 35 J9D H12 H12 H 0 1 N N N -12.040 17.567 19.141 -1.196 -2.047 0.406 H12 J9D 36 J9D H13 H13 H 0 1 N N N -7.795 18.435 17.821 -2.078 3.586 -0.036 H13 J9D 37 J9D H14 H14 H 0 1 N N N -6.619 17.866 18.802 -0.550 4.285 -0.062 H14 J9D 38 J9D H15 H15 H 0 1 N N N -4.334 11.392 18.697 8.505 -2.010 -1.439 H15 J9D 39 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal J9D N11 C10 SING N N 1 J9D C10 N09 DOUB Y N 2 J9D C10 C12 SING Y N 3 J9D N09 C08 SING Y N 4 J9D O20 C19 SING N N 5 J9D C12 C13 DOUB Y N 6 J9D C08 N07 SING N N 7 J9D C08 N22 DOUB Y N 8 J9D N07 C06 SING N N 9 J9D C05 C06 DOUB Y N 10 J9D C05 C04 SING Y N 11 J9D C13 N22 SING Y N 12 J9D C13 N14 SING N N 13 J9D C06 C23 SING Y N 14 J9D C21 N14 SING Y N 15 J9D C21 C17 DOUB Y N 16 J9D C04 C03 DOUB Y N 17 J9D N14 C15 SING Y N 18 J9D C19 C18 SING N N 19 J9D C17 C18 SING N N 20 J9D C17 N16 SING Y N 21 J9D C23 C24 DOUB Y N 22 J9D C15 N16 DOUB Y N 23 J9D C03 C24 SING Y N 24 J9D C03 C02 SING N N 25 J9D C02 N01 TRIP N N 26 J9D C15 H1 SING N N 27 J9D C21 H2 SING N N 28 J9D C24 H3 SING N N 29 J9D C04 H4 SING N N 30 J9D C05 H5 SING N N 31 J9D C12 H6 SING N N 32 J9D C18 H7 SING N N 33 J9D C18 H8 SING N N 34 J9D C19 H9 SING N N 35 J9D C19 H10 SING N N 36 J9D C23 H11 SING N N 37 J9D N07 H12 SING N N 38 J9D N11 H13 SING N N 39 J9D N11 H14 SING N N 40 J9D O20 H15 SING N N 41 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor J9D SMILES ACDLabs 12.01 "c3(nc(Nc1ccc(cc1)C#N)nc(n2cnc(CCO)c2)c3)N" J9D InChI InChI 1.03 "InChI=1S/C16H15N7O/c17-8-11-1-3-12(4-2-11)20-16-21-14(18)7-15(22-16)23-9-13(5-6-24)19-10-23/h1-4,7,9-10,24H,5-6H2,(H3,18,20,21,22)" J9D InChIKey InChI 1.03 OVFXXQZOTWTSJA-UHFFFAOYSA-N J9D SMILES_CANONICAL CACTVS 3.385 "Nc1cc(nc(Nc2ccc(cc2)C#N)n1)n3cnc(CCO)c3" J9D SMILES CACTVS 3.385 "Nc1cc(nc(Nc2ccc(cc2)C#N)n1)n3cnc(CCO)c3" J9D SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1cc(ccc1C#N)Nc2nc(cc(n2)n3cc(nc3)CCO)N" J9D SMILES "OpenEye OEToolkits" 2.0.6 "c1cc(ccc1C#N)Nc2nc(cc(n2)n3cc(nc3)CCO)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier J9D "SYSTEMATIC NAME" ACDLabs 12.01 "4-({4-amino-6-[4-(2-hydroxyethyl)-1H-imidazol-1-yl]pyrimidin-2-yl}amino)benzonitrile" J9D "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "4-[[4-azanyl-6-[4-(2-hydroxyethyl)imidazol-1-yl]pyrimidin-2-yl]amino]benzenecarbonitrile" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site J9D "Create component" 2018-08-24 RCSB J9D "Initial release" 2018-09-05 RCSB #