data_J9I # _chem_comp.id J9I _chem_comp.name "4-(4-azanylpyrimidin-2-yl)-N-[2-methyl-5-[4-[(4-methylpiperazin-1-yl)methyl]phenyl]phenyl]-1,3-thiazol-2-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H29 N7 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-04-25 _chem_comp.pdbx_modified_date 2023-06-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 471.620 _chem_comp.one_letter_code ? _chem_comp.three_letter_code J9I _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7ZI5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal J9I N1 N1 N 0 1 Y N N -12.193 -27.601 10.265 5.099 3.186 -0.223 N1 J9I 1 J9I N3 N2 N 0 1 Y N N -11.893 -30.408 9.851 4.100 -0.315 -0.034 N3 J9I 2 J9I C4 C1 C 0 1 Y N N -10.021 -26.027 9.881 7.447 2.104 0.549 C4 J9I 3 J9I C5 C2 C 0 1 Y N N -10.834 -29.562 10.191 4.047 1.004 -0.221 C5 J9I 4 J9I C6 C3 C 0 1 Y N N -11.520 -31.657 9.881 3.007 -0.980 -0.241 C6 J9I 5 J9I C7 C4 C 0 1 Y N N -9.688 -30.216 10.532 2.849 1.481 -0.606 C7 J9I 6 J9I C8 C5 C 0 1 Y N N -11.982 -34.030 9.284 1.603 -2.940 -0.210 C8 J9I 7 J9I C10 C6 C 0 1 Y N N -10.885 -36.098 9.943 -0.782 -2.829 0.072 C10 J9I 8 J9I C13 C7 C 0 1 Y N N -12.360 -34.598 8.069 1.478 -4.226 -0.723 C13 J9I 9 J9I C15 C8 C 0 1 Y N N -10.114 -36.902 10.920 -1.995 -2.085 0.494 C15 J9I 10 J9I C17 C9 C 0 1 Y N N -8.378 -37.162 12.586 -3.010 -0.108 1.400 C17 J9I 11 J9I C20 C10 C 0 1 Y N N -10.361 -38.260 11.025 -3.252 -2.675 0.381 C20 J9I 12 J9I C21 C11 C 0 1 N N N -7.930 -39.435 13.654 -5.489 0.062 1.701 C21 J9I 13 J9I C22 C12 C 0 1 N N N -6.111 -40.932 14.030 -7.334 1.386 0.859 C22 J9I 14 J9I C24 C13 C 0 1 N N N -4.583 -39.836 11.946 -5.611 2.600 -1.080 C24 J9I 15 J9I C26 C14 C 0 1 N N N -2.736 -41.320 12.432 -7.456 3.923 -1.922 C26 J9I 16 J9I C1 C15 C 0 1 Y N N -10.970 -28.112 10.138 5.223 1.881 -0.019 C1 J9I 17 J9I C2 C16 C 0 1 Y N N -12.345 -26.262 10.197 6.128 4.002 -0.053 C2 J9I 18 J9I C3 C17 C 0 1 Y N N -11.268 -25.423 10.019 7.345 3.482 0.342 C3 J9I 19 J9I N2 N3 N 0 1 Y N N -9.875 -27.354 9.954 6.375 1.343 0.361 N2 J9I 20 J9I S1 S1 S 0 1 Y N N -9.879 -31.923 10.380 1.729 0.127 -0.730 S1 J9I 21 J9I N4 N4 N 0 1 N N N -12.330 -32.684 9.518 2.866 -2.352 -0.098 N4 J9I 22 J9I C9 C18 C 0 1 Y N N -11.246 -34.777 10.210 0.474 -2.239 0.185 C9 J9I 23 J9I C11 C19 C 0 1 Y N N -11.291 -36.665 8.734 -0.897 -4.121 -0.439 C11 J9I 24 J9I C12 C20 C 0 1 Y N N -12.009 -35.926 7.807 0.231 -4.811 -0.836 C12 J9I 25 J9I C14 C21 C 0 1 N N N -13.112 -33.815 7.051 2.706 -4.984 -1.158 C14 J9I 26 J9I C16 C22 C 0 1 Y N N -9.097 -36.367 11.702 -1.879 -0.796 1.010 C16 J9I 27 J9I C18 C23 C 0 1 Y N N -8.643 -38.526 12.681 -4.257 -0.696 1.280 C18 J9I 28 J9I C19 C24 C 0 1 Y N N -9.643 -39.054 11.888 -4.376 -1.978 0.775 C19 J9I 29 J9I N5 N5 N 0 1 N N N -6.494 -39.637 13.460 -6.009 0.825 0.558 N5 J9I 30 J9I C23 C25 C 0 1 N N N -4.620 -41.145 13.940 -7.874 2.103 -0.380 C23 J9I 31 J9I N6 N6 N 0 1 N N N -4.183 -41.107 12.548 -6.935 3.161 -0.779 N6 J9I 32 J9I C25 C26 C 0 1 N N N -6.076 -39.600 12.062 -5.070 1.882 0.160 C25 J9I 33 J9I N7 N7 N 0 1 N N N -8.931 -25.296 9.704 8.648 1.539 0.946 N7 J9I 34 J9I H1 H1 H 0 1 N N N -8.780 -29.729 10.855 2.615 2.516 -0.805 H1 J9I 35 J9I H2 H2 H 0 1 N N N -7.610 -36.720 13.203 -2.923 0.893 1.796 H2 J9I 36 J9I H3 H3 H 0 1 N N N -11.134 -38.705 10.416 -3.346 -3.676 -0.015 H3 J9I 37 J9I H4 H4 H 0 1 N N N -8.071 -39.015 14.661 -6.248 -0.640 2.046 H4 J9I 38 J9I H5 H5 H 0 1 N N N -8.412 -40.422 13.597 -5.235 0.748 2.510 H5 J9I 39 J9I H6 H6 H 0 1 N N N -6.415 -40.964 15.087 -8.014 0.582 1.139 H6 J9I 40 J9I H7 H7 H 0 1 N N N -6.623 -41.733 13.477 -7.250 2.095 1.682 H7 J9I 41 J9I H8 H8 H 0 1 N N N -4.306 -39.844 10.881 -5.695 1.890 -1.903 H8 J9I 42 J9I H9 H9 H 0 1 N N N -4.053 -39.018 12.457 -4.930 3.404 -1.361 H9 J9I 43 J9I H10 H10 H 0 1 N N N -2.468 -42.282 12.893 -7.543 3.266 -2.788 H10 J9I 44 J9I H11 H11 H 0 1 N N N -2.451 -41.331 11.370 -8.437 4.327 -1.673 H11 J9I 45 J9I H12 H12 H 0 1 N N N -2.203 -40.506 12.946 -6.774 4.741 -2.154 H12 J9I 46 J9I H13 H13 H 0 1 N N N -13.335 -25.838 10.284 6.017 5.063 -0.222 H13 J9I 47 J9I H14 H14 H 0 1 N N N -11.385 -24.350 9.988 8.200 4.126 0.488 H14 J9I 48 J9I H15 H15 H 0 1 N N N -13.297 -32.457 9.402 3.644 -2.904 0.079 H15 J9I 49 J9I H16 H16 H 0 1 N N N -10.953 -34.324 11.146 0.568 -1.238 0.580 H16 J9I 50 J9I H17 H17 H 0 1 N N N -11.042 -37.694 8.518 -1.870 -4.581 -0.528 H17 J9I 51 J9I H18 H18 H 0 1 N N N -12.301 -36.381 6.872 0.139 -5.810 -1.235 H18 J9I 52 J9I H19 H19 H 0 1 N N N -14.192 -33.936 7.219 3.098 -5.555 -0.316 H19 J9I 53 J9I H20 H20 H 0 1 N N N -12.845 -32.751 7.136 2.444 -5.666 -1.968 H20 J9I 54 J9I H21 H21 H 0 1 N N N -12.855 -34.179 6.045 3.463 -4.282 -1.506 H21 J9I 55 J9I H22 H22 H 0 1 N N N -8.862 -35.316 11.621 -0.907 -0.336 1.104 H22 J9I 56 J9I H23 H23 H 0 1 N N N -9.865 -40.109 11.947 -5.351 -2.435 0.687 H23 J9I 57 J9I H25 H25 H 0 1 N N N -4.367 -42.124 14.373 -7.984 1.388 -1.196 H25 J9I 58 J9I H26 H26 H 0 1 N N N -4.106 -40.352 14.503 -8.844 2.545 -0.151 H26 J9I 59 J9I H28 H28 H 0 1 N N N -6.321 -38.615 11.637 -4.101 1.440 -0.070 H28 J9I 60 J9I H29 H29 H 0 1 N N N -6.610 -40.383 11.504 -4.960 2.598 0.975 H29 J9I 61 J9I H30 H30 H 0 1 N N N -8.132 -25.895 9.651 8.711 0.582 1.088 H30 J9I 62 J9I H31 H31 H 0 1 N N N -9.013 -24.775 8.854 9.427 2.102 1.082 H31 J9I 63 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal J9I C14 C13 SING N N 1 J9I C12 C13 DOUB Y N 2 J9I C12 C11 SING Y N 3 J9I C13 C8 SING Y N 4 J9I C11 C10 DOUB Y N 5 J9I C8 N4 SING N N 6 J9I C8 C9 DOUB Y N 7 J9I N4 C6 SING N N 8 J9I N7 C4 SING N N 9 J9I N3 C6 DOUB Y N 10 J9I N3 C5 SING Y N 11 J9I C4 N2 DOUB Y N 12 J9I C4 C3 SING Y N 13 J9I C6 S1 SING Y N 14 J9I C10 C9 SING Y N 15 J9I C10 C15 SING N N 16 J9I N2 C1 SING Y N 17 J9I C3 C2 DOUB Y N 18 J9I C1 C5 SING N N 19 J9I C1 N1 DOUB Y N 20 J9I C5 C7 DOUB Y N 21 J9I C2 N1 SING Y N 22 J9I S1 C7 SING Y N 23 J9I C15 C20 DOUB Y N 24 J9I C15 C16 SING Y N 25 J9I C20 C19 SING Y N 26 J9I C16 C17 DOUB Y N 27 J9I C19 C18 DOUB Y N 28 J9I C24 C25 SING N N 29 J9I C24 N6 SING N N 30 J9I C25 N5 SING N N 31 J9I C26 N6 SING N N 32 J9I N6 C23 SING N N 33 J9I C17 C18 SING Y N 34 J9I C18 C21 SING N N 35 J9I N5 C21 SING N N 36 J9I N5 C22 SING N N 37 J9I C23 C22 SING N N 38 J9I C7 H1 SING N N 39 J9I C17 H2 SING N N 40 J9I C20 H3 SING N N 41 J9I C21 H4 SING N N 42 J9I C21 H5 SING N N 43 J9I C22 H6 SING N N 44 J9I C22 H7 SING N N 45 J9I C24 H8 SING N N 46 J9I C24 H9 SING N N 47 J9I C26 H10 SING N N 48 J9I C26 H11 SING N N 49 J9I C26 H12 SING N N 50 J9I C2 H13 SING N N 51 J9I C3 H14 SING N N 52 J9I N4 H15 SING N N 53 J9I C9 H16 SING N N 54 J9I C11 H17 SING N N 55 J9I C12 H18 SING N N 56 J9I C14 H19 SING N N 57 J9I C14 H20 SING N N 58 J9I C14 H21 SING N N 59 J9I C16 H22 SING N N 60 J9I C19 H23 SING N N 61 J9I C23 H25 SING N N 62 J9I C23 H26 SING N N 63 J9I C25 H28 SING N N 64 J9I C25 H29 SING N N 65 J9I N7 H30 SING N N 66 J9I N7 H31 SING N N 67 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor J9I InChI InChI 1.06 "InChI=1S/C26H29N7S/c1-18-3-6-21(20-7-4-19(5-8-20)16-33-13-11-32(2)12-14-33)15-22(18)29-26-30-23(17-34-26)25-28-10-9-24(27)31-25/h3-10,15,17H,11-14,16H2,1-2H3,(H,29,30)(H2,27,28,31)" J9I InChIKey InChI 1.06 NXMIBBNDQZPGDZ-UHFFFAOYSA-N J9I SMILES_CANONICAL CACTVS 3.385 "CN1CCN(CC1)Cc2ccc(cc2)c3ccc(C)c(Nc4scc(n4)c5nccc(N)n5)c3" J9I SMILES CACTVS 3.385 "CN1CCN(CC1)Cc2ccc(cc2)c3ccc(C)c(Nc4scc(n4)c5nccc(N)n5)c3" J9I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1Nc2nc(cs2)c3nccc(n3)N)c4ccc(cc4)CN5CCN(CC5)C" J9I SMILES "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1Nc2nc(cs2)c3nccc(n3)N)c4ccc(cc4)CN5CCN(CC5)C" # _pdbx_chem_comp_identifier.comp_id J9I _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-(4-azanylpyrimidin-2-yl)-~{N}-[2-methyl-5-[4-[(4-methylpiperazin-1-yl)methyl]phenyl]phenyl]-1,3-thiazol-2-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site J9I "Create component" 2022-04-25 PDBE J9I "Modify descriptor" 2022-08-22 RCSB J9I "Initial release" 2023-06-07 RCSB #