data_JBT # _chem_comp.id JBT _chem_comp.name "GDP-N-acetylperosamine-coenzyme A" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C39 H64 N13 O30 P5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-03-23 _chem_comp.pdbx_modified_date 2012-03-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 1381.928 _chem_comp.one_letter_code ? _chem_comp.three_letter_code JBT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4EA9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal JBT O5P O5P O 0 1 N N N -35.439 -19.508 -22.892 -0.554 -2.535 2.023 O5P JBT 1 JBT C5P C5P C 0 1 N N N -36.484 -18.939 -22.680 -0.556 -3.079 0.939 C5P JBT 2 JBT N4P N4P N 0 1 N N N -36.562 -17.915 -21.839 0.553 -3.059 0.174 N4P JBT 3 JBT C3P C3P C 0 1 N N N -35.421 -17.319 -21.174 1.761 -2.381 0.650 C3P JBT 4 JBT C2P C2P C 0 1 N N N -35.782 -16.186 -20.341 2.865 -2.506 -0.401 C2P JBT 5 JBT S1P S1P S 0 1 N N N -34.380 -15.450 -19.497 4.360 -1.665 0.190 S1P JBT 6 JBT C6P C6P C 0 1 N N N -37.756 -19.398 -23.291 -1.796 -3.782 0.451 C6P JBT 7 JBT C7P C7P C 0 1 N N N -37.645 -20.179 -24.466 -2.899 -3.662 1.505 C7P JBT 8 JBT N8P N8P N 0 1 N N N -38.953 -20.588 -24.954 -4.104 -4.346 1.031 N8P JBT 9 JBT C9P C9P C 0 1 N N N -39.144 -21.668 -25.674 -5.211 -4.370 1.799 C9P JBT 10 JBT O9P O9P O 0 1 N N N -38.189 -22.354 -26.079 -5.185 -3.899 2.916 O9P JBT 11 JBT CAP CAP C 0 1 N N R -40.557 -22.013 -25.963 -6.482 -4.984 1.270 CAP JBT 12 JBT OAP OAP O 0 1 N N N -40.803 -23.389 -25.594 -6.209 -5.662 0.043 OAP JBT 13 JBT CBP CBP C 0 1 N N N -41.048 -21.659 -27.409 -7.516 -3.883 1.025 CBP JBT 14 JBT CDP CDP C 0 1 N N N -40.178 -22.346 -28.469 -7.928 -3.264 2.362 CDP JBT 15 JBT CEP CEP C 0 1 N N N -40.968 -20.155 -27.625 -6.909 -2.803 0.128 CEP JBT 16 JBT CCP CCP C 0 1 N N N -42.379 -22.228 -27.577 -8.746 -4.482 0.341 CCP JBT 17 JBT O6A O6A O 0 1 N N N -43.346 -21.715 -26.715 -9.712 -3.454 0.112 O6A JBT 18 JBT P2A P2A P 0 1 N N N -44.847 -22.125 -26.871 -11.134 -3.728 -0.593 P2A JBT 19 JBT O4A O4A O 0 1 N N N -45.213 -21.976 -28.264 -11.849 -4.797 0.138 O4A JBT 20 JBT O5A O5A O 0 1 N N N -45.569 -21.601 -25.646 -10.897 -4.186 -2.118 O5A JBT 21 JBT O3A O3A O 0 1 N N N -44.688 -23.779 -26.849 -12.013 -2.380 -0.568 O3A JBT 22 JBT P1A P1A P 0 1 N N N -45.359 -24.902 -26.043 -13.586 -2.068 -0.713 P1A JBT 23 JBT O1A O1A O 0 1 N N N -44.726 -24.952 -24.715 -14.024 -2.217 -2.255 O1A JBT 24 JBT O2A O2A O 0 1 N N N -46.826 -24.814 -26.091 -14.357 -3.024 0.113 O2A JBT 25 JBT O5B O5B O 0 1 N N N -44.858 -26.061 -26.899 -13.884 -0.566 -0.214 O5B JBT 26 JBT C5B C5B C 0 1 N N N -45.325 -26.177 -28.312 -15.202 -0.024 -0.120 C5B JBT 27 JBT C4B C4B C 0 1 N N R -44.624 -27.387 -28.957 -15.126 1.418 0.386 C4B JBT 28 JBT C3B C3B C 0 1 N N S -44.515 -28.727 -28.218 -16.545 1.984 0.614 C3B JBT 29 JBT O3B O3B O 0 1 N N N -44.507 -29.839 -29.128 -16.901 1.901 1.996 O3B JBT 30 JBT P3B P3B P 0 1 N N N -45.884 -30.610 -29.434 -18.171 1.066 2.526 P3B JBT 31 JBT O9A O9A O 0 1 N N N -46.763 -29.610 -30.274 -18.075 -0.333 2.051 O9A JBT 32 JBT O8A O8A O 0 1 N N N -46.548 -30.919 -28.148 -18.192 1.085 4.136 O8A JBT 33 JBT O7A O7A O 0 1 N N N -45.400 -31.764 -30.234 -19.524 1.732 1.964 O7A JBT 34 JBT C2B C2B C 0 1 N N R -43.062 -28.689 -27.750 -16.437 3.460 0.170 C2B JBT 35 JBT O2B O2B O 0 1 N N N -42.481 -29.928 -27.383 -16.723 4.334 1.264 O2B JBT 36 JBT O4B O4B O 0 1 N N N -43.243 -26.971 -29.230 -14.546 2.274 -0.623 O4B JBT 37 JBT C1B C1B C 0 1 N N R -42.271 -27.931 -28.713 -14.966 3.611 -0.274 C1B JBT 38 JBT N9A N9A N 0 1 Y N N -41.187 -27.125 -28.218 -14.873 4.495 -1.439 N9A JBT 39 JBT C4A C4A C 0 1 Y N N -39.851 -27.086 -28.685 -14.739 5.860 -1.414 C4A JBT 40 JBT N3A N3A N 0 1 Y N N -39.279 -27.813 -29.558 -14.654 6.777 -0.456 N3A JBT 41 JBT C2A C2A C 0 1 Y N N -37.978 -27.530 -29.730 -14.527 8.052 -0.757 C2A JBT 42 JBT C8A C8A C 0 1 Y N N -41.314 -26.168 -27.321 -14.898 4.111 -2.747 C8A JBT 43 JBT N7A N7A N 0 1 Y N N -40.181 -25.547 -27.102 -14.793 5.154 -3.518 N7A JBT 44 JBT C5A C5A C 0 1 Y N N -39.270 -26.100 -27.941 -14.691 6.269 -2.757 C5A JBT 45 JBT C6A C6A C 0 1 Y N N -37.915 -25.839 -28.163 -14.555 7.642 -3.028 C6A JBT 46 JBT N1A N1A N 0 1 Y N N -37.297 -26.548 -29.061 -14.477 8.485 -2.004 N1A JBT 47 JBT N6A N6A N 0 1 N N N -37.254 -24.871 -27.523 -14.502 8.104 -4.331 N6A JBT 48 JBT O6 O6 O 0 1 N N N -45.779 -1.112 -17.974 15.840 6.841 4.557 O6 JBT 49 JBT C6 C6 C 0 1 N N N -45.194 -1.592 -16.947 16.001 6.765 3.351 C6 JBT 50 JBT C5 C5 C 0 1 Y N N -45.142 -2.899 -16.568 15.965 5.514 2.692 C5 JBT 51 JBT N7 N7 N 0 1 Y N N -45.659 -4.066 -17.078 15.777 4.236 3.103 N7 JBT 52 JBT C8 C8 C 0 1 Y N N -45.271 -5.014 -16.268 15.840 3.440 2.076 C8 JBT 53 JBT N1 N1 N 0 1 N N N -44.522 -0.709 -16.139 16.212 7.875 2.609 N1 JBT 54 JBT C2 C2 C 0 1 N N N -43.905 -1.102 -14.957 16.389 7.779 1.261 C2 JBT 55 JBT N2 N2 N 0 1 N N N -43.326 -0.130 -14.264 16.602 8.922 0.534 N2 JBT 56 JBT N3 N3 N 0 1 N N N -43.856 -2.363 -14.554 16.364 6.622 0.638 N3 JBT 57 JBT C4 C4 C 0 1 Y N N -44.473 -3.222 -15.372 16.155 5.481 1.306 C4 JBT 58 JBT N9 N9 N 0 1 Y N N -44.573 -4.552 -15.212 16.071 4.164 0.943 N9 JBT 59 JBT "C1'" "C1'" C 0 1 N N R -44.043 -5.310 -14.101 16.206 3.630 -0.414 "C1'" JBT 60 JBT "O4'" "O4'" O 0 1 N N N -42.947 -6.085 -14.613 15.635 2.307 -0.499 "O4'" JBT 61 JBT "C2'" "C2'" C 0 1 N N R -44.953 -6.364 -13.462 17.699 3.402 -0.766 "C2'" JBT 62 JBT "O2'" "O2'" O 0 1 N N N -45.954 -5.769 -12.682 18.289 4.596 -1.283 "O2'" JBT 63 JBT "C3'" "C3'" C 0 1 N N S -43.976 -7.317 -12.834 17.612 2.310 -1.859 "C3'" JBT 64 JBT "O3'" "O3'" O 0 1 N N N -43.684 -7.009 -11.465 17.689 2.897 -3.160 "O3'" JBT 65 JBT "C4'" "C4'" C 0 1 N N R -42.756 -7.227 -13.749 16.230 1.665 -1.639 "C4'" JBT 66 JBT "C5'" "C5'" C 0 1 N N N -42.527 -8.401 -14.597 16.392 0.168 -1.368 "C5'" JBT 67 JBT "O5'" "O5'" O 0 1 N N N -42.028 -9.452 -13.747 15.103 -0.440 -1.265 "O5'" JBT 68 JBT P P P 0 1 N N N -41.862 -10.923 -14.262 14.894 -2.011 -0.982 P JBT 69 JBT O1P O1P O 0 1 N N N -41.067 -11.653 -13.199 15.467 -2.861 -2.223 O1P JBT 70 JBT O2P O2P O 0 1 N N N -43.148 -11.480 -14.688 15.618 -2.391 0.252 O2P JBT 71 JBT OPP OPP O 0 1 N N N -41.022 -10.770 -15.604 13.324 -2.320 -0.799 OPP JBT 72 JBT P2 P2 P 0 1 N N N -39.541 -10.194 -15.845 12.492 -3.521 -0.124 P2 JBT 73 JBT O3P O3P O 0 1 N N N -39.649 -9.244 -16.957 13.146 -4.811 -0.436 O3P JBT 74 JBT O4P O4P O 0 1 N N N -38.973 -9.762 -14.568 12.448 -3.313 1.472 O4P JBT 75 JBT O1G O1G O 0 1 N N N -38.766 -11.512 -16.263 10.990 -3.526 -0.705 O1G JBT 76 JBT C1G C1G C 0 1 N N R -38.945 -12.080 -17.546 10.033 -4.536 -0.380 C1G JBT 77 JBT O5G O5G O 0 1 N N N -37.884 -11.757 -18.387 9.302 -4.143 0.783 O5G JBT 78 JBT C5G C5G C 0 1 N N R -36.629 -12.298 -17.950 8.606 -2.903 0.642 C5G JBT 79 JBT C6G C6G C 0 1 N N N -35.647 -11.798 -19.024 7.886 -2.571 1.951 C6G JBT 80 JBT C2G C2G C 0 1 N N S -39.157 -13.542 -17.424 9.066 -4.720 -1.552 C2G JBT 81 JBT O2G O2G O 0 1 N N N -39.478 -14.049 -18.748 8.141 -5.766 -1.249 O2G JBT 82 JBT C3G C3G C 0 1 N N S -37.842 -14.195 -16.915 8.301 -3.412 -1.782 C3G JBT 83 JBT O3G O3G O 0 1 N N N -37.988 -15.631 -16.961 7.345 -3.595 -2.828 O3G JBT 84 JBT C4G C4G C 0 1 N N S -36.664 -13.799 -17.792 7.580 -3.021 -0.488 C4G JBT 85 JBT N4A N4A N 0 1 N N N -35.424 -14.284 -17.156 6.905 -1.730 -0.675 N4A JBT 86 JBT C01 C01 C 0 1 N N S -34.865 -15.514 -17.685 5.535 -1.919 -1.170 C01 JBT 87 JBT C02 C02 C 0 1 N N N -33.558 -15.832 -16.950 5.251 -0.910 -2.284 C02 JBT 88 JBT H1 H1 H 0 1 N N N -37.466 -17.530 -21.652 0.552 -3.494 -0.693 H1 JBT 89 JBT H2 H2 H 0 1 N N N -34.945 -18.083 -20.541 1.541 -1.327 0.823 H2 JBT 90 JBT H3 H3 H 0 1 N N N -34.707 -16.979 -21.939 2.092 -2.840 1.582 H3 JBT 91 JBT H4 H4 H 0 1 N N N -36.248 -15.419 -20.977 3.085 -3.559 -0.574 H4 JBT 92 JBT H5 H5 H 0 1 N N N -36.506 -16.525 -19.585 2.534 -2.046 -1.332 H5 JBT 93 JBT H6 H6 H 0 1 N N N -38.350 -18.505 -23.538 -2.131 -3.324 -0.479 H6 JBT 94 JBT H7 H7 H 0 1 N N N -38.290 -19.998 -22.540 -1.572 -4.835 0.278 H7 JBT 95 JBT H8 H8 H 0 1 N N N -37.048 -21.076 -24.245 -2.563 -4.120 2.436 H8 JBT 96 JBT H9 H9 H 0 1 N N N -37.141 -19.586 -25.244 -3.122 -2.609 1.679 H9 JBT 97 JBT H10 H10 H 0 1 N N N -39.744 -20.019 -24.730 -4.106 -4.781 0.164 H10 JBT 98 JBT H11 H11 H 0 1 N N N -41.167 -21.393 -25.290 -6.873 -5.694 1.998 H11 JBT 99 JBT H12 H12 H 0 1 N N N -39.978 -23.857 -25.546 -5.857 -5.090 -0.653 H12 JBT 100 JBT H13 H13 H 0 1 N N N -40.222 -23.436 -28.330 -7.068 -2.770 2.814 H13 JBT 101 JBT H14 H14 H 0 1 N N N -40.550 -22.089 -29.472 -8.720 -2.533 2.196 H14 JBT 102 JBT H15 H15 H 0 1 N N N -39.137 -22.005 -28.366 -8.290 -4.046 3.029 H15 JBT 103 JBT H16 H16 H 0 1 N N N -41.586 -19.643 -26.873 -6.616 -3.244 -0.824 H16 JBT 104 JBT H17 H17 H 0 1 N N N -39.923 -19.826 -27.526 -7.646 -2.019 -0.046 H17 JBT 105 JBT H18 H18 H 0 1 N N N -41.336 -19.909 -28.632 -6.033 -2.376 0.616 H18 JBT 106 JBT H19 H19 H 0 1 N N N -42.705 -22.037 -28.610 -8.453 -4.924 -0.612 H19 JBT 107 JBT H20 H20 H 0 1 N N N -42.311 -23.313 -27.409 -9.179 -5.252 0.980 H20 JBT 108 JBT H21 H21 H 0 1 N N N -46.348 -21.128 -25.915 -10.432 -3.533 -2.658 H21 JBT 109 JBT H22 H22 H 0 1 N N N -45.396 -24.918 -24.043 -13.558 -1.619 -2.856 H22 JBT 110 JBT H23 H23 H 0 1 N N N -45.069 -25.261 -28.865 -15.672 -0.040 -1.103 H23 JBT 111 JBT H24 H24 H 0 1 N N N -46.415 -26.325 -28.332 -15.792 -0.622 0.575 H24 JBT 112 JBT H25 H25 H 0 1 N N N -45.122 -27.581 -29.919 -14.545 1.467 1.307 H25 JBT 113 JBT H26 H26 H 0 1 N N N -45.232 -28.819 -27.389 -17.272 1.452 -0.001 H26 JBT 114 JBT H27 H27 H 0 1 N N N -47.371 -30.448 -28.095 -18.932 0.600 4.525 H27 JBT 115 JBT H28 H28 H 0 1 N N N -45.716 -31.686 -31.126 -19.653 2.651 2.236 H28 JBT 116 JBT H29 H29 H 0 1 N N N -43.077 -28.078 -26.835 -17.112 3.658 -0.663 H29 JBT 117 JBT H30 H30 H 0 1 N N N -43.043 -30.369 -26.757 -16.669 5.273 1.041 H30 JBT 118 JBT H31 H31 H 0 1 N N N -41.923 -28.591 -29.521 -14.358 3.999 0.544 H31 JBT 119 JBT H32 H32 H 0 1 N N N -37.428 -28.120 -30.448 -14.460 8.772 0.046 H32 JBT 120 JBT H33 H33 H 0 1 N N N -42.242 -25.924 -26.825 -14.991 3.092 -3.092 H33 JBT 121 JBT H34 H34 H 0 1 N N N -36.312 -24.834 -27.856 -14.559 7.479 -5.070 H34 JBT 122 JBT H35 H35 H 0 1 N N N -37.702 -23.993 -27.693 -14.408 9.054 -4.505 H35 JBT 123 JBT H36 H36 H 0 1 N N N -45.487 -6.060 -16.428 15.725 2.367 2.115 H36 JBT 124 JBT H37 H37 H 0 1 N N N -44.475 0.252 -16.411 16.236 8.745 3.038 H37 JBT 125 JBT H38 H38 H 0 1 N N N -42.839 -0.342 -13.417 16.624 9.784 0.980 H38 JBT 126 JBT H39 H39 H 0 1 N N N -43.377 0.814 -14.589 16.730 8.870 -0.426 H39 JBT 127 JBT H40 H40 H 0 1 N N N -43.688 -4.626 -13.316 15.740 4.299 -1.137 H40 JBT 128 JBT H41 H41 H 0 1 N N N -45.438 -6.903 -14.289 18.252 3.041 0.102 H41 JBT 129 JBT H42 H42 H 0 1 N N N -46.501 -6.445 -12.299 19.222 4.504 -1.518 H42 JBT 130 JBT H43 H43 H 0 1 N N N -44.385 -8.336 -12.903 18.404 1.574 -1.727 H43 JBT 131 JBT H44 H44 H 0 1 N N N -44.477 -7.082 -10.947 18.516 3.368 -3.331 H44 JBT 132 JBT H45 H45 H 0 1 N N N -41.868 -7.062 -13.121 15.605 1.818 -2.519 H45 JBT 133 JBT H46 H46 H 0 1 N N N -43.470 -8.714 -15.069 16.946 -0.292 -2.187 H46 JBT 134 JBT H47 H47 H 0 1 N N N -41.788 -8.164 -15.376 16.937 0.024 -0.435 H47 JBT 135 JBT H48 H48 H 0 1 N N N -41.539 -12.431 -12.928 15.038 -2.663 -3.067 H48 JBT 136 JBT H49 H49 H 0 1 N N N -38.726 -8.847 -14.624 12.032 -2.486 1.750 H49 JBT 137 JBT H50 H50 H 0 1 N N N -39.864 -11.657 -17.977 10.549 -5.477 -0.184 H50 JBT 138 JBT H51 H51 H 0 1 N N N -36.346 -11.848 -16.987 9.317 -2.111 0.407 H51 JBT 139 JBT H52 H52 H 0 1 N N N -34.634 -12.157 -18.791 8.620 -2.439 2.746 H52 JBT 140 JBT H53 H53 H 0 1 N N N -35.954 -12.181 -20.008 7.314 -1.651 1.828 H53 JBT 141 JBT H54 H54 H 0 1 N N N -35.651 -10.698 -19.041 7.211 -3.386 2.211 H54 JBT 142 JBT H55 H55 H 0 1 N N N -39.971 -13.755 -16.715 9.626 -4.977 -2.451 H55 JBT 143 JBT H56 H56 H 0 1 N N N -39.620 -14.987 -18.702 8.557 -6.624 -1.086 H56 JBT 144 JBT H57 H57 H 0 1 N N N -37.655 -13.862 -15.883 9.002 -2.625 -2.062 H57 JBT 145 JBT H58 H58 H 0 1 N N N -38.721 -15.893 -16.417 7.733 -3.851 -3.676 H58 JBT 146 JBT H59 H59 H 0 1 N N N -36.780 -14.265 -18.782 6.845 -3.784 -0.235 H59 JBT 147 JBT H60 H60 H 0 1 N N N -34.732 -13.569 -17.254 6.910 -1.192 0.179 H60 JBT 148 JBT H62 H62 H 0 1 N N N -35.571 -16.351 -17.583 5.426 -2.931 -1.560 H62 JBT 149 JBT H63 H63 H 0 1 N N N -33.750 -15.889 -15.868 5.956 -1.062 -3.101 H63 JBT 150 JBT H64 H64 H 0 1 N N N -33.164 -16.796 -17.304 4.234 -1.050 -2.651 H64 JBT 151 JBT H65 H65 H 0 1 N N N -32.822 -15.039 -17.151 5.359 0.102 -1.894 H65 JBT 152 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal JBT O9A P3B DOUB N N 1 JBT O7A P3B SING N N 2 JBT C2A N3A DOUB Y N 3 JBT C2A N1A SING Y N 4 JBT N3A C4A SING Y N 5 JBT P3B O3B SING N N 6 JBT P3B O8A SING N N 7 JBT O4B C4B SING N N 8 JBT O4B C1B SING N N 9 JBT O3B C3B SING N N 10 JBT N1A C6A DOUB Y N 11 JBT C4B C5B SING N N 12 JBT C4B C3B SING N N 13 JBT C1B N9A SING N N 14 JBT C1B C2B SING N N 15 JBT C4A N9A SING Y N 16 JBT C4A C5A DOUB Y N 17 JBT CDP CBP SING N N 18 JBT C5B O5B SING N N 19 JBT O4A P2A DOUB N N 20 JBT N9A C8A SING Y N 21 JBT C3B C2B SING N N 22 JBT C6A C5A SING Y N 23 JBT C6A N6A SING N N 24 JBT C5A N7A SING Y N 25 JBT C2B O2B SING N N 26 JBT CEP CBP SING N N 27 JBT CCP CBP SING N N 28 JBT CCP O6A SING N N 29 JBT CBP CAP SING N N 30 JBT C8A N7A DOUB Y N 31 JBT O5B P1A SING N N 32 JBT P2A O3A SING N N 33 JBT P2A O6A SING N N 34 JBT P2A O5A SING N N 35 JBT O3A P1A SING N N 36 JBT O2A P1A DOUB N N 37 JBT O9P C9P DOUB N N 38 JBT P1A O1A SING N N 39 JBT CAP C9P SING N N 40 JBT CAP OAP SING N N 41 JBT C9P N8P SING N N 42 JBT N8P C7P SING N N 43 JBT C7P C6P SING N N 44 JBT C6P C5P SING N N 45 JBT O5P C5P DOUB N N 46 JBT C5P N4P SING N N 47 JBT N4P C3P SING N N 48 JBT C3P C2P SING N N 49 JBT C2P S1P SING N N 50 JBT S1P C01 SING N N 51 JBT C6G C5G SING N N 52 JBT O2G C2G SING N N 53 JBT O5G C5G SING N N 54 JBT O5G C1G SING N N 55 JBT O6 C6 DOUB N N 56 JBT C5G C4G SING N N 57 JBT C4G N4A SING N N 58 JBT C4G C3G SING N N 59 JBT C01 N4A SING N N 60 JBT C01 C02 SING N N 61 JBT C1G C2G SING N N 62 JBT C1G O1G SING N N 63 JBT C2G C3G SING N N 64 JBT N7 C5 SING Y N 65 JBT N7 C8 DOUB Y N 66 JBT O3G C3G SING N N 67 JBT O3P P2 DOUB N N 68 JBT C6 C5 SING N N 69 JBT C6 N1 SING N N 70 JBT C5 C4 DOUB Y N 71 JBT C8 N9 SING Y N 72 JBT O1G P2 SING N N 73 JBT N1 C2 SING N N 74 JBT P2 OPP SING N N 75 JBT P2 O4P SING N N 76 JBT OPP P SING N N 77 JBT C4 N9 SING Y N 78 JBT C4 N3 SING N N 79 JBT N9 "C1'" SING N N 80 JBT C2 N3 DOUB N N 81 JBT C2 N2 SING N N 82 JBT O2P P DOUB N N 83 JBT "O4'" "C1'" SING N N 84 JBT "O4'" "C4'" SING N N 85 JBT "C5'" "C4'" SING N N 86 JBT "C5'" "O5'" SING N N 87 JBT P "O5'" SING N N 88 JBT P O1P SING N N 89 JBT "C1'" "C2'" SING N N 90 JBT "C4'" "C3'" SING N N 91 JBT "C2'" "C3'" SING N N 92 JBT "C2'" "O2'" SING N N 93 JBT "C3'" "O3'" SING N N 94 JBT N4P H1 SING N N 95 JBT C3P H2 SING N N 96 JBT C3P H3 SING N N 97 JBT C2P H4 SING N N 98 JBT C2P H5 SING N N 99 JBT C6P H6 SING N N 100 JBT C6P H7 SING N N 101 JBT C7P H8 SING N N 102 JBT C7P H9 SING N N 103 JBT N8P H10 SING N N 104 JBT CAP H11 SING N N 105 JBT OAP H12 SING N N 106 JBT CDP H13 SING N N 107 JBT CDP H14 SING N N 108 JBT CDP H15 SING N N 109 JBT CEP H16 SING N N 110 JBT CEP H17 SING N N 111 JBT CEP H18 SING N N 112 JBT CCP H19 SING N N 113 JBT CCP H20 SING N N 114 JBT O5A H21 SING N N 115 JBT O1A H22 SING N N 116 JBT C5B H23 SING N N 117 JBT C5B H24 SING N N 118 JBT C4B H25 SING N N 119 JBT C3B H26 SING N N 120 JBT O8A H27 SING N N 121 JBT O7A H28 SING N N 122 JBT C2B H29 SING N N 123 JBT O2B H30 SING N N 124 JBT C1B H31 SING N N 125 JBT C2A H32 SING N N 126 JBT C8A H33 SING N N 127 JBT N6A H34 SING N N 128 JBT N6A H35 SING N N 129 JBT C8 H36 SING N N 130 JBT N1 H37 SING N N 131 JBT N2 H38 SING N N 132 JBT N2 H39 SING N N 133 JBT "C1'" H40 SING N N 134 JBT "C2'" H41 SING N N 135 JBT "O2'" H42 SING N N 136 JBT "C3'" H43 SING N N 137 JBT "O3'" H44 SING N N 138 JBT "C4'" H45 SING N N 139 JBT "C5'" H46 SING N N 140 JBT "C5'" H47 SING N N 141 JBT O1P H48 SING N N 142 JBT O4P H49 SING N N 143 JBT C1G H50 SING N N 144 JBT C5G H51 SING N N 145 JBT C6G H52 SING N N 146 JBT C6G H53 SING N N 147 JBT C6G H54 SING N N 148 JBT C2G H55 SING N N 149 JBT O2G H56 SING N N 150 JBT C3G H57 SING N N 151 JBT O3G H58 SING N N 152 JBT C4G H59 SING N N 153 JBT N4A H60 SING N N 154 JBT C01 H62 SING N N 155 JBT C02 H63 SING N N 156 JBT C02 H64 SING N N 157 JBT C02 H65 SING N N 158 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor JBT SMILES ACDLabs 12.01 "O=P(O)(O)OC1C(O)C(OC1COP(=O)(O)OP(=O)(O)OCC(C)(C)C(O)C(=O)NCCC(=O)NCCSC(NC5C(OC(OP(=O)(OP(=O)(OCC4OC(n2c3N=C(N)NC(=O)c3nc2)C(O)C4O)O)O)C(O)C5O)C)C)n6c7ncnc(N)c7nc6" JBT InChI InChI 1.03 ;InChI=1S/C39H64N13O30P5S/c1-15-20(24(55)26(57)37(76-15)80-87(71,72)82-85(67,68)73-9-17-23(54)25(56)35(77-17)52-14-47-22-32(52)49-38(41)50-33(22)60)48-16(2)88-8-7-42-19(53)5-6-43-34(61)29(59)39(3,4)11-75-86(69,70)81-84(65,66)74-10-18-28(79-83(62,63)64)27(58)36(78-18)51-13-46-21-30(40)44-12-45-31(21)51/h12-18,20,23-29,35-37,48,54-59H,5-11H2,1-4H3,(H,42,53)(H,43,61)(H,65,66)(H,67,68)(H,69,70)(H,71,72)(H2,40,44,45)(H2,62,63,64)(H3,41,49,50,60)/t15-,16+,17-,18-,20-,23-,24+,25-,26+,27-,28-,29+,35-,36-,37-/m1/s1 ; JBT InChIKey InChI 1.03 JPJUGYYIHUXJRE-NLBQBQJKSA-N JBT SMILES_CANONICAL CACTVS 3.370 "C[C@@H](N[C@@H]1[C@@H](C)O[C@H](O[P](O)(=O)O[P](O)(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n3cnc4C(=O)NC(=Nc34)N)[C@@H](O)[C@H]1O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)CO[P](O)(=O)O[P](O)(=O)OC[C@H]5O[C@H]([C@H](O)[C@@H]5O[P](O)(O)=O)n6cnc7c(N)ncnc67" JBT SMILES CACTVS 3.370 "C[CH](N[CH]1[CH](C)O[CH](O[P](O)(=O)O[P](O)(=O)OC[CH]2O[CH]([CH](O)[CH]2O)n3cnc4C(=O)NC(=Nc34)N)[CH](O)[CH]1O)SCCNC(=O)CCNC(=O)[CH](O)C(C)(C)CO[P](O)(=O)O[P](O)(=O)OC[CH]5O[CH]([CH](O)[CH]5O[P](O)(O)=O)n6cnc7c(N)ncnc67" JBT SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C[C@@H]1[C@H]([C@@H]([C@@H]([C@H](O1)OP(=O)(O)OP(=O)(O)OC[C@@H]2[C@H]([C@H]([C@@H](O2)n3cnc4c3N=C(NC4=O)N)O)O)O)O)N[C@H](C)SCCNC(=O)CCNC(=O)[C@@H](C(C)(C)COP(=O)(O)OP(=O)(O)OC[C@@H]5[C@H]([C@H]([C@@H](O5)n6cnc7c6ncnc7N)O)OP(=O)(O)O)O" JBT SMILES "OpenEye OEToolkits" 1.7.6 "CC1C(C(C(C(O1)OP(=O)(O)OP(=O)(O)OCC2C(C(C(O2)n3cnc4c3N=C(NC4=O)N)O)O)O)O)NC(C)SCCNC(=O)CCNC(=O)C(C(C)(C)COP(=O)(O)OP(=O)(O)OCC5C(C(C(O5)n6cnc7c6ncnc7N)O)OP(=O)(O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier JBT "SYSTEMATIC NAME" ACDLabs 12.01 ;(3R)-4-({3-[(2-{[(1S)-1-{[(2R,3S,4S,5S,6R)-6-{[(S)-{[(S)-{[(2R,3S,4R,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-4,5-dihydroxy-2-methyltetrahydro-2H-pyran-3-yl]amino}ethyl]sulfanyl}ethyl)amino]-3-oxopropyl}amino)-3-hydroxy-2,2-dimethyl-4-oxobutyl [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]methyl dihydrogen diphosphate (non-preferred name) ; JBT "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 ;[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(3R)-4-[[3-[2-[(1S)-1-[[(2R,3S,4S,5S,6R)-6-[[[(2R,3S,4R,5R)-5-(2-azanyl-6-oxidanylidene-1H-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-2-methyl-4,5-bis(oxidanyl)oxan-3-yl]amino]ethyl]sulfanylethylamino]-3-oxidanylidene-propyl]amino]-2,2-dimethyl-3-oxidanyl-4-oxidanylidene-butyl] hydrogen phosphate ; # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site JBT "Create component" 2012-03-23 RCSB #