data_JC6 # _chem_comp.id JC6 _chem_comp.name Steviolbioside _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C32 H50 O13" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-05-17 _chem_comp.pdbx_modified_date 2021-12-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 642.732 _chem_comp.one_letter_code ? _chem_comp.three_letter_code JC6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7ERX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal JC6 C1 C1 C 0 1 N N S -14.341 -4.085 26.520 0.888 -0.670 0.001 C1 JC6 1 JC6 C2 C2 C 0 1 N N R -15.679 -3.615 25.951 2.327 -1.184 -0.105 C2 JC6 2 JC6 C3 C3 C 0 1 N N S -16.610 -4.826 25.897 2.310 -2.619 -0.640 C3 JC6 3 JC6 C4 C4 C 0 1 N N S -16.018 -5.880 24.975 1.449 -3.487 0.283 C4 JC6 4 JC6 C5 C5 C 0 1 N N R -14.596 -6.263 25.438 0.045 -2.884 0.374 C5 JC6 5 JC6 C6 C6 C 0 1 N N N -13.819 -7.073 24.421 -0.804 -3.711 1.342 C6 JC6 6 JC6 CAA C7 C 0 1 N N N -11.316 -4.792 27.723 0.677 3.527 1.165 CAA JC6 7 JC6 CAB C8 C 0 1 N N N -11.915 -3.821 28.386 -0.337 2.699 1.095 CAB JC6 8 JC6 CAC C9 C 0 1 N N N -11.890 -3.582 29.879 -1.719 2.911 1.687 CAC JC6 9 JC6 CAD C10 C 0 1 N N R -12.647 -2.244 30.111 -2.570 1.725 1.168 CAD JC6 10 JC6 CAE C11 C 0 1 N N N -13.646 -2.283 28.938 -1.528 0.590 1.087 CAE JC6 11 JC6 CAF C12 C 0 1 N N N -13.347 -2.238 31.461 -3.654 1.371 2.165 CAF JC6 12 JC6 CAG C13 C 0 1 N N N -13.943 -0.888 31.821 -4.613 0.341 1.544 CAG JC6 13 JC6 CAH C14 C 0 1 N N S -12.847 0.177 31.855 -5.238 0.986 0.310 CAH JC6 14 JC6 CAI C15 C 0 1 N N R -13.167 1.492 32.644 -6.504 0.294 -0.141 CAI JC6 15 JC6 CAJ C16 C 0 1 N N N -13.537 1.171 34.107 -7.585 0.508 0.949 CAJ JC6 16 JC6 CAK C17 C 0 1 N N N -14.395 2.217 32.034 -6.337 -1.192 -0.306 CAK JC6 17 JC6 OAM O1 O 0 1 N N N -15.415 1.582 31.880 -7.376 -1.944 -0.702 OAM JC6 18 JC6 OAL O2 O 0 1 N N N -14.288 3.382 31.722 -5.268 -1.708 -0.081 OAL JC6 19 JC6 CAN C18 C 0 1 N N N -11.897 2.363 32.678 -7.066 0.905 -1.424 CAN JC6 20 JC6 CAO C19 C 0 1 N N N -11.282 2.614 31.315 -5.995 1.093 -2.490 CAO JC6 21 JC6 CAP C20 C 0 1 N N N -10.995 1.307 30.585 -4.846 1.938 -1.947 CAP JC6 22 JC6 CAQ C21 C 0 1 N N S -12.211 0.363 30.443 -4.181 1.209 -0.765 CAQ JC6 23 JC6 CAR C22 C 0 1 N N N -13.181 0.998 29.429 -3.579 -0.093 -1.282 CAR JC6 24 JC6 CAS C23 C 0 1 N N R -11.668 -1.047 29.993 -3.092 2.115 -0.200 CAS JC6 25 JC6 CAT C24 C 0 1 N N N -10.956 -1.073 28.622 -1.979 2.414 -1.187 CAT JC6 26 JC6 CAU C25 C 0 1 N N N -11.810 -1.512 27.424 -0.751 1.527 -1.058 CAU JC6 27 JC6 CAV C26 C 0 1 N N S -12.733 -2.691 27.759 -0.350 1.342 0.410 CAV JC6 28 JC6 O1 O3 O 0 1 N N N -13.447 -2.996 26.567 0.892 0.648 0.552 O1 JC6 29 JC6 O5 O4 O 0 1 N N N -13.778 -5.081 25.665 0.134 -1.539 0.849 O5 JC6 30 JC6 O6 O5 O 0 1 N N N -12.432 -6.636 24.369 -2.146 -3.220 1.338 O6 JC6 31 JC6 O4 O6 O 0 1 N N N -16.880 -7.022 24.938 1.367 -4.812 -0.246 O4 JC6 32 JC6 O3 O7 O 0 1 N N N -17.892 -4.425 25.424 3.644 -3.132 -0.675 O3 JC6 33 JC6 O2 O8 O 0 1 N N N -16.251 -2.536 26.717 3.067 -0.350 -0.998 O2 JC6 34 JC6 CBI C27 C 0 1 N N S -16.409 -1.315 26.013 4.461 -0.265 -0.693 CBI JC6 35 JC6 OBL O9 O 0 1 N N N -15.795 -0.204 26.679 4.634 0.377 0.572 OBL JC6 36 JC6 CBM C28 C 0 1 N N R -15.779 0.994 25.846 5.997 0.491 0.987 CBM JC6 37 JC6 CBR C29 C 0 1 N N N -15.012 2.086 26.579 6.057 1.164 2.359 CBR JC6 38 JC6 OBS O10 O 0 1 N N N -15.701 2.602 27.723 5.436 0.321 3.331 OBS JC6 39 JC6 CBN C30 C 0 1 N N S -17.211 1.390 25.481 6.769 1.334 -0.030 CBN JC6 40 JC6 OBO O11 O 0 1 N N N -17.149 2.450 24.531 8.144 1.403 0.352 OBO JC6 41 JC6 CBP C31 C 0 1 N N S -17.973 0.206 24.893 6.653 0.686 -1.413 CBP JC6 42 JC6 OBQ O12 O 0 1 N N N -19.343 0.542 24.679 7.310 1.505 -2.382 OBQ JC6 43 JC6 CBJ C32 C 0 1 N N R -17.884 -0.998 25.813 5.172 0.548 -1.778 CBJ JC6 44 JC6 OBK O13 O 0 1 N N N -18.598 -2.111 25.282 5.050 -0.121 -3.034 OBK JC6 45 JC6 H1 H1 H 0 1 N N N -14.505 -4.495 27.528 0.437 -0.648 -0.991 H1 JC6 46 JC6 H2 H2 H 0 1 N N N -15.508 -3.273 24.920 2.793 -1.167 0.880 H2 JC6 47 JC6 H3 H3 H 0 1 N N N -16.696 -5.249 26.909 1.890 -2.628 -1.646 H3 JC6 48 JC6 H4 H4 H 0 1 N N N -15.940 -5.449 23.966 1.897 -3.517 1.276 H4 JC6 49 JC6 H5 H5 H 0 1 N N N -14.676 -6.843 26.369 -0.418 -2.891 -0.613 H5 JC6 50 JC6 H6 H6 H 0 1 N N N -14.276 -6.942 23.429 -0.798 -4.755 1.028 H6 JC6 51 JC6 H7 H7 H 0 1 N N N -13.853 -8.136 24.703 -0.390 -3.631 2.347 H7 JC6 52 JC6 H8 H8 H 0 1 N N N -10.729 -5.526 28.254 0.599 4.429 1.754 H8 JC6 53 JC6 H9 H9 H 0 1 N N N -11.413 -4.852 26.649 1.592 3.306 0.634 H9 JC6 54 JC6 H10 H10 H 0 1 N N N -12.396 -4.404 30.406 -1.683 2.880 2.773 H10 JC6 55 JC6 H11 H11 H 0 1 N N N -10.853 -3.501 30.236 -2.149 3.846 1.338 H11 JC6 56 JC6 H12 H12 H 0 1 N N N -14.103 -1.297 28.768 -1.240 0.264 2.098 H12 JC6 57 JC6 H13 H13 H 0 1 N N N -14.436 -3.029 29.109 -1.852 -0.266 0.513 H13 JC6 58 JC6 H14 H14 H 0 1 N N N -14.156 -2.982 31.438 -3.201 0.950 3.062 H14 JC6 59 JC6 H15 H15 H 0 1 N N N -12.616 -2.515 32.235 -4.212 2.271 2.427 H15 JC6 60 JC6 H16 H16 H 0 1 N N N -14.697 -0.611 31.069 -4.059 -0.554 1.282 H16 JC6 61 JC6 H17 H17 H 0 1 N N N -14.419 -0.952 32.811 -5.377 0.093 2.278 H17 JC6 62 JC6 H18 H18 H 0 1 N N N -12.043 -0.289 32.443 -5.549 2.012 0.640 H18 JC6 63 JC6 H19 H19 H 0 1 N N N -13.758 2.106 34.643 -7.766 1.576 1.076 H19 JC6 64 JC6 H20 H20 H 0 1 N N N -14.423 0.519 34.126 -8.509 0.017 0.645 H20 JC6 65 JC6 H21 H21 H 0 1 N N N -12.694 0.659 34.594 -7.240 0.083 1.891 H21 JC6 66 JC6 H22 H22 H 0 1 N N N -16.079 2.138 31.490 -7.220 -2.894 -0.793 H22 JC6 67 JC6 H23 H23 H 0 1 N N N -11.149 1.858 33.307 -7.851 0.248 -1.814 H23 JC6 68 JC6 H24 H24 H 0 1 N N N -12.156 3.334 33.124 -7.520 1.873 -1.190 H24 JC6 69 JC6 H25 H25 H 0 1 N N N -10.340 3.166 31.444 -5.641 0.133 -2.852 H25 JC6 70 JC6 H26 H26 H 0 1 N N N -11.980 3.215 30.713 -6.441 1.624 -3.345 H26 JC6 71 JC6 H27 H27 H 0 1 N N N -10.209 0.772 31.138 -4.108 2.100 -2.731 H27 JC6 72 JC6 H28 H28 H 0 1 N N N -10.632 1.551 29.576 -5.229 2.897 -1.599 H28 JC6 73 JC6 H29 H29 H 0 1 N N N -13.518 1.975 29.806 -2.766 0.132 -1.972 H29 JC6 74 JC6 H30 H30 H 0 1 N N N -12.667 1.134 28.466 -3.195 -0.673 -0.443 H30 JC6 75 JC6 H31 H31 H 0 1 N N N -14.050 0.338 29.291 -4.347 -0.668 -1.800 H31 JC6 76 JC6 H32 H32 H 0 1 N N N -10.873 -1.272 30.719 -3.605 3.102 -0.048 H32 JC6 77 JC6 H33 H33 H 0 1 N N N -10.104 -1.765 28.699 -2.367 2.336 -2.206 H33 JC6 78 JC6 H34 H34 H 0 1 N N N -10.586 -0.058 28.416 -1.666 3.458 -1.046 H34 JC6 79 JC6 H35 H35 H 0 1 N N N -11.140 -1.811 26.604 -0.939 0.554 -1.511 H35 JC6 80 JC6 H36 H36 H 0 1 N N N -12.428 -0.661 27.101 0.083 1.993 -1.596 H36 JC6 81 JC6 H37 H37 H 0 1 N N N -11.960 -7.154 23.727 -2.741 -3.699 1.930 H37 JC6 82 JC6 H38 H38 H 0 1 N N N -17.746 -6.757 24.650 0.832 -5.415 0.287 H38 JC6 83 JC6 H39 H39 H 0 1 N N N -18.253 -3.767 26.006 3.708 -4.038 -1.004 H39 JC6 84 JC6 H40 H40 H 0 1 N N N -15.956 -1.420 25.016 4.886 -1.268 -0.653 H40 JC6 85 JC6 H41 H41 H 0 1 N N N -15.242 0.770 24.913 6.442 -0.502 1.049 H41 JC6 86 JC6 H42 H42 H 0 1 N N N -14.049 1.671 26.911 7.098 1.331 2.636 H42 JC6 87 JC6 H43 H43 H 0 1 N N N -14.832 2.915 25.878 5.534 2.119 2.319 H43 JC6 88 JC6 H44 H44 H 0 1 N N N -15.173 3.276 28.134 5.438 0.686 4.227 H44 JC6 89 JC6 H45 H45 H 0 1 N N N -17.728 1.727 26.392 6.350 2.340 -0.063 H45 JC6 90 JC6 H46 H46 H 0 1 N N N -16.673 3.183 24.904 8.695 1.923 -0.249 H46 JC6 91 JC6 H47 H47 H 0 1 N N N -17.506 -0.059 23.933 7.117 -0.301 -1.393 H47 JC6 92 JC6 H48 H48 H 0 1 N N N -19.800 -0.206 24.313 7.276 1.154 -3.283 H48 JC6 93 JC6 H49 H49 H 0 1 N N N -18.311 -0.719 26.788 4.720 1.538 -1.846 H49 JC6 94 JC6 H50 H50 H 0 1 N N N -18.525 -2.848 25.877 4.136 -0.243 -3.328 H50 JC6 95 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal JC6 O6 C6 SING N N 1 JC6 C6 C5 SING N N 2 JC6 OBO CBN SING N N 3 JC6 OBQ CBP SING N N 4 JC6 CBP CBN SING N N 5 JC6 CBP CBJ SING N N 6 JC6 O4 C4 SING N N 7 JC6 C4 C5 SING N N 8 JC6 C4 C3 SING N N 9 JC6 OBK CBJ SING N N 10 JC6 O3 C3 SING N N 11 JC6 C5 O5 SING N N 12 JC6 CBN CBM SING N N 13 JC6 O5 C1 SING N N 14 JC6 CBJ CBI SING N N 15 JC6 CBM CBR SING N N 16 JC6 CBM OBL SING N N 17 JC6 C3 C2 SING N N 18 JC6 C2 C1 SING N N 19 JC6 C2 O2 SING N N 20 JC6 CBI OBL SING N N 21 JC6 CBI O2 SING N N 22 JC6 C1 O1 SING N N 23 JC6 O1 CAV SING N N 24 JC6 CBR OBS SING N N 25 JC6 CAU CAV SING N N 26 JC6 CAU CAT SING N N 27 JC6 CAA CAB DOUB N N 28 JC6 CAV CAB SING N N 29 JC6 CAV CAE SING N N 30 JC6 CAB CAC SING N N 31 JC6 CAT CAS SING N N 32 JC6 CAE CAD SING N N 33 JC6 CAR CAQ SING N N 34 JC6 CAC CAD SING N N 35 JC6 CAS CAD SING N N 36 JC6 CAS CAQ SING N N 37 JC6 CAD CAF SING N N 38 JC6 CAQ CAP SING N N 39 JC6 CAQ CAH SING N N 40 JC6 CAP CAO SING N N 41 JC6 CAO CAN SING N N 42 JC6 CAF CAG SING N N 43 JC6 OAL CAK DOUB N N 44 JC6 CAG CAH SING N N 45 JC6 CAH CAI SING N N 46 JC6 OAM CAK SING N N 47 JC6 CAK CAI SING N N 48 JC6 CAI CAN SING N N 49 JC6 CAI CAJ SING N N 50 JC6 C1 H1 SING N N 51 JC6 C2 H2 SING N N 52 JC6 C3 H3 SING N N 53 JC6 C4 H4 SING N N 54 JC6 C5 H5 SING N N 55 JC6 C6 H6 SING N N 56 JC6 C6 H7 SING N N 57 JC6 CAA H8 SING N N 58 JC6 CAA H9 SING N N 59 JC6 CAC H10 SING N N 60 JC6 CAC H11 SING N N 61 JC6 CAE H12 SING N N 62 JC6 CAE H13 SING N N 63 JC6 CAF H14 SING N N 64 JC6 CAF H15 SING N N 65 JC6 CAG H16 SING N N 66 JC6 CAG H17 SING N N 67 JC6 CAH H18 SING N N 68 JC6 CAJ H19 SING N N 69 JC6 CAJ H20 SING N N 70 JC6 CAJ H21 SING N N 71 JC6 OAM H22 SING N N 72 JC6 CAN H23 SING N N 73 JC6 CAN H24 SING N N 74 JC6 CAO H25 SING N N 75 JC6 CAO H26 SING N N 76 JC6 CAP H27 SING N N 77 JC6 CAP H28 SING N N 78 JC6 CAR H29 SING N N 79 JC6 CAR H30 SING N N 80 JC6 CAR H31 SING N N 81 JC6 CAS H32 SING N N 82 JC6 CAT H33 SING N N 83 JC6 CAT H34 SING N N 84 JC6 CAU H35 SING N N 85 JC6 CAU H36 SING N N 86 JC6 O6 H37 SING N N 87 JC6 O4 H38 SING N N 88 JC6 O3 H39 SING N N 89 JC6 CBI H40 SING N N 90 JC6 CBM H41 SING N N 91 JC6 CBR H42 SING N N 92 JC6 CBR H43 SING N N 93 JC6 OBS H44 SING N N 94 JC6 CBN H45 SING N N 95 JC6 OBO H46 SING N N 96 JC6 CBP H47 SING N N 97 JC6 OBQ H48 SING N N 98 JC6 CBJ H49 SING N N 99 JC6 OBK H50 SING N N 100 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor JC6 InChI InChI 1.03 "InChI=1S/C32H50O13/c1-15-11-31-9-5-18-29(2,7-4-8-30(18,3)28(40)41)19(31)6-10-32(15,14-31)45-27-25(23(38)21(36)17(13-34)43-27)44-26-24(39)22(37)20(35)16(12-33)42-26/h16-27,33-39H,1,4-14H2,2-3H3,(H,40,41)/t16-,17-,18+,19+,20-,21-,22+,23+,24-,25-,26+,27+,29-,30-,31-,32+/m1/s1" JC6 InChIKey InChI 1.03 OMHUCGDTACNQEX-OSHKXICASA-N JC6 SMILES_CANONICAL CACTVS 3.385 "C[C@@]12CCC[C@](C)([C@H]1CC[C@]34CC(=C)[C@](CC[C@@H]23)(C4)O[C@@H]5O[C@H](CO)[C@@H](O)[C@H](O)[C@H]5O[C@@H]6O[C@H](CO)[C@@H](O)[C@H](O)[C@H]6O)C(O)=O" JC6 SMILES CACTVS 3.385 "C[C]12CCC[C](C)([CH]1CC[C]34CC(=C)[C](CC[CH]23)(C4)O[CH]5O[CH](CO)[CH](O)[CH](O)[CH]5O[CH]6O[CH](CO)[CH](O)[CH](O)[CH]6O)C(O)=O" JC6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@]12CCC[C@@]([C@H]1CC[C@]34[C@H]2CC[C@](C3)(C(=C)C4)O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O)(C)C(=O)O" JC6 SMILES "OpenEye OEToolkits" 2.0.7 "CC12CCCC(C1CCC34C2CCC(C3)(C(=C)C4)OC5C(C(C(C(O5)CO)O)O)OC6C(C(C(C(O6)CO)O)O)O)(C)C(=O)O" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site JC6 "Create component" 2021-05-17 PDBJ JC6 "Initial release" 2021-12-08 RCSB ##