data_JD3 # _chem_comp.id JD3 _chem_comp.name "(2S,3R)-2-azanyl-3-(1H-indol-3-yl)butanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H14 N2 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-05-20 _chem_comp.pdbx_modified_date 2022-03-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 218.252 _chem_comp.one_letter_code ? _chem_comp.three_letter_code JD3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7EUZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal JD3 C09 C1 C 0 1 Y N N 4.872 39.394 149.875 -0.585 1.786 -0.040 C09 JD3 1 JD3 C11 C2 C 0 1 Y N N 6.519 38.130 150.567 -2.554 0.723 0.167 C11 JD3 2 JD3 C13 C3 C 0 1 Y N N 7.395 39.284 152.486 -1.938 -1.582 -0.275 C13 JD3 3 JD3 C15 C4 C 0 1 Y N N 8.398 37.201 151.786 -4.208 -1.009 0.212 C15 JD3 4 JD3 C02 C5 C 0 1 N N N 2.444 40.692 151.954 3.267 -0.648 0.329 C02 JD3 5 JD3 C04 C6 C 0 1 N N S 3.437 41.627 151.262 1.964 0.056 0.607 C04 JD3 6 JD3 C06 C7 C 0 1 N N R 4.914 41.357 151.606 1.035 -0.097 -0.599 C06 JD3 7 JD3 C07 C8 C 0 1 N N N 5.762 42.496 151.037 1.633 0.636 -1.801 C07 JD3 8 JD3 C08 C9 C 0 1 Y N N 5.400 40.032 150.996 -0.314 0.491 -0.272 C08 JD3 9 JD3 C12 C10 C 0 1 Y N N 6.468 39.209 151.434 -1.577 -0.240 -0.146 C12 JD3 10 JD3 C14 C11 C 0 1 Y N N 8.353 38.284 152.658 -3.240 -1.955 -0.096 C14 JD3 11 JD3 C16 C12 C 0 1 Y N N 7.486 37.119 150.740 -3.873 0.320 0.350 C16 JD3 12 JD3 N05 N1 N 0 1 N N N 3.032 42.990 151.593 2.220 1.482 0.850 N05 JD3 13 JD3 N10 N2 N 0 1 Y N N 5.550 38.281 149.650 -1.917 1.942 0.229 N10 JD3 14 JD3 O01 O1 O 0 1 N N N 1.211 40.952 151.853 4.233 -0.014 -0.023 O01 JD3 15 JD3 O03 O2 O 0 1 N N N 2.829 39.675 152.590 3.355 -1.980 0.473 O03 JD3 16 JD3 H1 H1 H 0 1 N N N 4.042 39.752 149.284 0.142 2.584 -0.058 H1 JD3 17 JD3 H2 H2 H 0 1 N N N 7.366 40.122 153.167 -1.190 -2.324 -0.516 H2 JD3 18 JD3 H3 H3 H 0 1 N N N 9.139 36.427 151.921 -5.233 -1.319 0.350 H3 JD3 19 JD3 H4 H4 H 0 1 N N N 3.322 41.486 150.177 1.494 -0.384 1.486 H4 JD3 20 JD3 H5 H5 H 0 1 N N N 5.033 41.321 152.699 0.921 -1.155 -0.838 H5 JD3 21 JD3 H6 H6 H 0 1 N N N 5.426 43.452 151.464 1.747 1.694 -1.561 H6 JD3 22 JD3 H7 H7 H 0 1 N N N 6.819 42.330 151.294 2.608 0.210 -2.037 H7 JD3 23 JD3 H8 H8 H 0 1 N N N 5.651 42.524 149.943 0.971 0.527 -2.660 H8 JD3 24 JD3 H9 H9 H 0 1 N N N 9.061 38.351 153.470 -3.519 -2.993 -0.196 H9 JD3 25 JD3 H10 H10 H 0 1 N N N 7.518 36.281 150.060 -4.633 1.049 0.590 H10 JD3 26 JD3 H11 H11 H 0 1 N N N 2.070 43.120 151.354 2.554 1.937 0.014 H11 JD3 27 JD3 H12 H12 H 0 1 N N N 3.155 43.146 152.573 1.395 1.941 1.207 H12 JD3 28 JD3 H14 H14 H 0 1 N N N 5.367 37.642 148.903 -2.350 2.787 0.428 H14 JD3 29 JD3 H15 H15 H 0 1 N N N 2.074 39.210 152.931 4.211 -2.386 0.283 H15 JD3 30 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal JD3 N10 C09 SING Y N 1 JD3 N10 C11 SING Y N 2 JD3 C09 C08 DOUB Y N 3 JD3 C11 C16 DOUB Y N 4 JD3 C11 C12 SING Y N 5 JD3 C16 C15 SING Y N 6 JD3 C08 C12 SING Y N 7 JD3 C08 C06 SING N N 8 JD3 C07 C06 SING N N 9 JD3 C04 N05 SING N N 10 JD3 C04 C06 SING N N 11 JD3 C04 C02 SING N N 12 JD3 C12 C13 DOUB Y N 13 JD3 C15 C14 DOUB Y N 14 JD3 O01 C02 DOUB N N 15 JD3 C02 O03 SING N N 16 JD3 C13 C14 SING Y N 17 JD3 C09 H1 SING N N 18 JD3 C13 H2 SING N N 19 JD3 C15 H3 SING N N 20 JD3 C04 H4 SING N N 21 JD3 C06 H5 SING N N 22 JD3 C07 H6 SING N N 23 JD3 C07 H7 SING N N 24 JD3 C07 H8 SING N N 25 JD3 C14 H9 SING N N 26 JD3 C16 H10 SING N N 27 JD3 N05 H11 SING N N 28 JD3 N05 H12 SING N N 29 JD3 N10 H14 SING N N 30 JD3 O03 H15 SING N N 31 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor JD3 InChI InChI 1.03 "InChI=1S/C12H14N2O2/c1-7(11(13)12(15)16)9-6-14-10-5-3-2-4-8(9)10/h2-7,11,14H,13H2,1H3,(H,15,16)/t7-,11+/m1/s1" JD3 InChIKey InChI 1.03 CZSQAYAIWDEOSA-HQJQHLMTSA-N JD3 SMILES_CANONICAL CACTVS 3.385 "C[C@@H]([C@H](N)C(O)=O)c1c[nH]c2ccccc12" JD3 SMILES CACTVS 3.385 "C[CH]([CH](N)C(O)=O)c1c[nH]c2ccccc12" JD3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](c1c[nH]c2c1cccc2)[C@@H](C(=O)O)N" JD3 SMILES "OpenEye OEToolkits" 2.0.7 "CC(c1c[nH]c2c1cccc2)C(C(=O)O)N" # _pdbx_chem_comp_identifier.comp_id JD3 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S},3~{R})-2-azanyl-3-(1~{H}-indol-3-yl)butanoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site JD3 "Create component" 2021-05-20 PDBJ JD3 "Initial release" 2022-03-16 RCSB ##