data_JDD # _chem_comp.id JDD _chem_comp.name "N-[2-(methylamino)-2-oxidanylidene-ethyl]-2-(4-pyrazol-1-ylphenyl)-N-(1-pyridin-2-ylpiperidin-4-yl)ethanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H28 N6 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-03-22 _chem_comp.pdbx_modified_date 2016-11-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 432.518 _chem_comp.one_letter_code ? _chem_comp.three_letter_code JDD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5G0V _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal JDD O1 O1 O 0 1 N N N 23.818 -26.985 22.810 0.920 1.457 1.170 O1 JDD 1 JDD C13 C13 C 0 1 N N N 23.330 -26.288 21.932 0.329 1.436 0.111 C13 JDD 2 JDD C14 C14 C 0 1 N N N 23.858 -26.343 20.509 1.018 0.921 -1.127 C14 JDD 3 JDD C15 C15 C 0 1 Y N N 25.022 -27.284 20.288 2.421 0.497 -0.781 C15 JDD 4 JDD C20 C20 C 0 1 Y N N 24.877 -28.414 19.489 2.671 -0.803 -0.381 C20 JDD 5 JDD C19 C19 C 0 1 Y N N 25.940 -29.276 19.268 3.957 -1.195 -0.063 C19 JDD 6 JDD C18 C18 C 0 1 Y N N 27.191 -28.986 19.808 4.999 -0.282 -0.146 C18 JDD 7 JDD N4 N4 N 0 1 Y N N 28.311 -29.827 19.516 6.306 -0.677 0.176 N4 JDD 8 JDD N5 N5 N 0 1 Y N N 28.548 -30.224 18.234 6.702 -1.954 0.592 N5 JDD 9 JDD C23 C23 C 0 1 Y N N 29.653 -30.957 18.322 7.994 -1.935 0.796 C23 JDD 10 JDD C22 C22 C 0 1 Y N N 30.136 -31.023 19.625 8.463 -0.647 0.517 C22 JDD 11 JDD C21 C21 C 0 1 Y N N 29.268 -30.277 20.365 7.407 0.106 0.133 C21 JDD 12 JDD C17 C17 C 0 1 Y N N 27.361 -27.834 20.575 4.746 1.023 -0.547 C17 JDD 13 JDD C16 C16 C 0 1 Y N N 26.284 -26.988 20.795 3.459 1.407 -0.869 C16 JDD 14 JDD N1 N1 N 0 1 N N N 22.303 -25.423 22.178 -0.946 1.869 0.043 N1 JDD 15 JDD C2 C2 C 0 1 N N N 21.721 -25.279 23.504 -1.631 1.927 -1.251 C2 JDD 16 JDD C1 C1 C 0 1 N N N 22.628 -24.659 24.553 -1.932 0.528 -1.723 C1 JDD 17 JDD O O O 0 1 N N N 23.595 -23.960 24.240 -1.505 -0.425 -1.107 O JDD 18 JDD N N N 0 1 N N N 22.347 -24.996 25.807 -2.676 0.336 -2.830 N JDD 19 JDD C C C 0 1 N N N 23.350 -25.495 26.730 -2.969 -1.024 -3.290 C JDD 20 JDD C3 C3 C 0 1 N N N 21.740 -24.615 21.071 -1.646 2.281 1.262 C3 JDD 21 JDD C7 C7 C 0 1 N N N 22.294 -23.191 21.067 -1.642 1.127 2.269 C7 JDD 22 JDD C6 C6 C 0 1 N N N 21.685 -22.390 19.914 -2.401 -0.063 1.676 C6 JDD 23 JDD N2 N2 N 0 1 N N N 20.215 -22.427 19.936 -3.780 0.338 1.369 N2 JDD 24 JDD C5 C5 C 0 1 N N N 19.678 -23.792 19.909 -3.810 1.413 0.368 C5 JDD 25 JDD C4 C4 C 0 1 N N N 20.213 -24.615 21.084 -3.093 2.647 0.922 C4 JDD 26 JDD C8 C8 C 0 1 Y N N 19.455 -21.391 20.443 -4.534 -0.752 0.951 C8 JDD 27 JDD N3 N3 N 0 1 Y N N 20.010 -20.170 20.409 -3.973 -1.949 0.879 N3 JDD 28 JDD C12 C12 C 0 1 Y N N 19.279 -19.137 20.863 -4.654 -3.010 0.488 C12 JDD 29 JDD C11 C11 C 0 1 Y N N 18.020 -19.273 21.412 -5.985 -2.907 0.137 C11 JDD 30 JDD C10 C10 C 0 1 Y N N 17.457 -20.529 21.442 -6.611 -1.669 0.198 C10 JDD 31 JDD C9 C9 C 0 1 Y N N 18.159 -21.617 20.951 -5.873 -0.577 0.618 C9 JDD 32 JDD H141 H141 H 0 0 N N N 23.034 -26.661 19.853 0.466 0.067 -1.520 H141 JDD 33 JDD H142 H142 H 0 0 N N N 24.181 -25.330 20.227 1.051 1.709 -1.878 H142 JDD 34 JDD H20 H20 H 0 1 N N N 23.920 -28.623 19.033 1.859 -1.513 -0.317 H20 JDD 35 JDD H16 H16 H 0 1 N N N 26.427 -26.085 21.369 3.262 2.420 -1.186 H16 JDD 36 JDD H19 H19 H 0 1 N N N 25.799 -30.170 18.679 4.151 -2.211 0.249 H19 JDD 37 JDD H17 H17 H 0 1 N N N 28.328 -27.601 20.996 5.555 1.735 -0.612 H17 JDD 38 JDD H21 H21 H 0 1 N N N 29.330 -30.082 21.425 7.438 1.147 -0.155 H21 JDD 39 JDD H23 H23 H 0 1 N N N 30.122 -31.445 17.480 8.596 -2.770 1.125 H23 JDD 40 JDD H22 H22 H 0 1 N N N 31.010 -31.552 19.975 9.488 -0.313 0.592 H22 JDD 41 JDD H21C H21C H 0 0 N N N 20.825 -24.647 23.414 -2.562 2.483 -1.144 H21C JDD 42 JDD H22C H22C H 0 0 N N N 21.430 -26.279 23.857 -0.991 2.427 -1.979 H22C JDD 43 JDD H3 H3 H 0 1 N N N 22.053 -25.084 20.126 -1.143 3.145 1.696 H3 JDD 44 JDD H H H 0 1 N N N 21.405 -24.902 26.129 -3.018 1.099 -3.323 H JDD 45 JDD HC1 HC1 H 0 1 N N N 22.882 -25.705 27.703 -2.036 -1.543 -3.507 HC1 JDD 46 JDD HC2 HC2 H 0 1 N N N 23.790 -26.420 26.328 -3.511 -1.561 -2.511 HC2 JDD 47 JDD HC3 HC3 H 0 1 N N N 24.139 -24.739 26.858 -3.579 -0.979 -4.192 HC3 JDD 48 JDD H71C H71C H 0 0 N N N 22.045 -22.702 22.020 -0.614 0.833 2.482 H71C JDD 49 JDD H72C H72C H 0 0 N N N 23.387 -23.227 20.947 -2.129 1.446 3.190 H72C JDD 50 JDD H41C H41C H 0 0 N N N 19.848 -25.649 21.000 -3.603 2.990 1.822 H41C JDD 51 JDD H42C H42C H 0 0 N N N 19.857 -24.176 22.028 -3.102 3.439 0.173 H42C JDD 52 JDD H61C H61C H 0 0 N N N 22.016 -21.344 19.994 -1.906 -0.391 0.762 H61C JDD 53 JDD H62C H62C H 0 0 N N N 22.037 -22.814 18.962 -2.412 -0.881 2.396 H62C JDD 54 JDD H51C H51C H 0 0 N N N 18.581 -23.748 19.971 -3.308 1.078 -0.539 H51C JDD 55 JDD H52C H52C H 0 0 N N N 19.973 -24.276 18.967 -4.845 1.666 0.139 H52C JDD 56 JDD H9 H9 H 0 1 N N N 17.728 -22.607 20.957 -6.330 0.400 0.682 H9 JDD 57 JDD H12 H12 H 0 1 N N N 19.701 -18.145 20.794 -4.163 -3.971 0.442 H12 JDD 58 JDD H11 H11 H 0 1 N N N 17.491 -18.418 21.807 -6.533 -3.781 -0.183 H11 JDD 59 JDD H10 H10 H 0 1 N N N 16.466 -20.666 21.849 -7.651 -1.562 -0.072 H10 JDD 60 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal JDD O1 C13 DOUB N N 1 JDD C13 C14 SING N N 2 JDD C13 N1 SING N N 3 JDD C14 C15 SING N N 4 JDD C15 C20 SING Y N 5 JDD C15 C16 DOUB Y N 6 JDD C20 C19 DOUB Y N 7 JDD C19 C18 SING Y N 8 JDD C18 N4 SING N N 9 JDD C18 C17 DOUB Y N 10 JDD N4 N5 SING Y N 11 JDD N4 C21 SING Y N 12 JDD N5 C23 DOUB Y N 13 JDD C23 C22 SING Y N 14 JDD C22 C21 DOUB Y N 15 JDD C17 C16 SING Y N 16 JDD N1 C2 SING N N 17 JDD N1 C3 SING N N 18 JDD C2 C1 SING N N 19 JDD C1 O DOUB N N 20 JDD C1 N SING N N 21 JDD N C SING N N 22 JDD C3 C7 SING N N 23 JDD C3 C4 SING N N 24 JDD C7 C6 SING N N 25 JDD C6 N2 SING N N 26 JDD N2 C5 SING N N 27 JDD N2 C8 SING N N 28 JDD C5 C4 SING N N 29 JDD C8 N3 DOUB Y N 30 JDD C8 C9 SING Y N 31 JDD N3 C12 SING Y N 32 JDD C12 C11 DOUB Y N 33 JDD C11 C10 SING Y N 34 JDD C10 C9 DOUB Y N 35 JDD C14 H141 SING N N 36 JDD C14 H142 SING N N 37 JDD C20 H20 SING N N 38 JDD C16 H16 SING N N 39 JDD C19 H19 SING N N 40 JDD C17 H17 SING N N 41 JDD C21 H21 SING N N 42 JDD C23 H23 SING N N 43 JDD C22 H22 SING N N 44 JDD C2 H21C SING N N 45 JDD C2 H22C SING N N 46 JDD C3 H3 SING N N 47 JDD N H SING N N 48 JDD C HC1 SING N N 49 JDD C HC2 SING N N 50 JDD C HC3 SING N N 51 JDD C7 H71C SING N N 52 JDD C7 H72C SING N N 53 JDD C4 H41C SING N N 54 JDD C4 H42C SING N N 55 JDD C6 H61C SING N N 56 JDD C6 H62C SING N N 57 JDD C5 H51C SING N N 58 JDD C5 H52C SING N N 59 JDD C9 H9 SING N N 60 JDD C12 H12 SING N N 61 JDD C11 H11 SING N N 62 JDD C10 H10 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor JDD InChI InChI 1.03 "InChI=1S/C24H28N6O2/c1-25-23(31)18-29(20-10-15-28(16-11-20)22-5-2-3-12-26-22)24(32)17-19-6-8-21(9-7-19)30-14-4-13-27-30/h2-9,12-14,20H,10-11,15-18H2,1H3,(H,25,31)" JDD InChIKey InChI 1.03 YEXLLXYWKQMRML-UHFFFAOYSA-N JDD SMILES_CANONICAL CACTVS 3.385 "CNC(=O)CN(C1CCN(CC1)c2ccccn2)C(=O)Cc3ccc(cc3)n4cccn4" JDD SMILES CACTVS 3.385 "CNC(=O)CN(C1CCN(CC1)c2ccccn2)C(=O)Cc3ccc(cc3)n4cccn4" JDD SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CNC(=O)CN(C1CCN(CC1)c2ccccn2)C(=O)Cc3ccc(cc3)n4cccn4" JDD SMILES "OpenEye OEToolkits" 1.7.6 "CNC(=O)CN(C1CCN(CC1)c2ccccn2)C(=O)Cc3ccc(cc3)n4cccn4" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier JDD "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "N-[2-(methylamino)-2-oxidanylidene-ethyl]-2-(4-pyrazol-1-ylphenyl)-N-(1-pyridin-2-ylpiperidin-4-yl)ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site JDD "Create component" 2016-03-22 EBI JDD "Initial release" 2016-11-30 RCSB #