data_JES # _chem_comp.id JES _chem_comp.name 2,6-anhydro-8-O-phosphono-D-erythro-D-galacto-octitol _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C8 H17 O10 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-09-05 _chem_comp.pdbx_modified_date 2026-10-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 304.188 _chem_comp.one_letter_code ? _chem_comp.three_letter_code JES _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6MDK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal JES O10 O1 O 0 1 N N N N N N 2.472 -15.072 -1.535 3.931 1.627 -0.337 O10 JES 1 JES C6 C1 C 0 1 N N R N N N 2.624 -12.077 1.846 0.282 -1.032 -0.236 C6 JES 2 JES C5 C2 C 0 1 N N R N N N 3.335 -10.838 1.837 -1.035 -0.535 0.364 C5 JES 3 JES C4 C3 C 0 1 N N S N N N 2.862 -9.886 0.860 -2.186 -1.414 -0.131 C4 JES 4 JES C2 C4 C 0 1 N N S N N N 4.880 -8.872 0.718 -3.668 0.589 -0.001 C2 JES 5 JES C1 C5 C 0 1 N N S N N N 5.445 -9.863 1.596 -2.459 1.391 0.490 C1 JES 6 JES C8 C6 C 0 1 N N N N N N 6.523 -10.140 1.210 -2.582 2.841 0.017 C8 JES 7 JES C7 C7 C 0 1 N N N N N N 2.853 -12.906 0.660 1.432 -0.153 0.259 C7 JES 8 JES O9 O2 O 0 1 N N N N N N 0.318 -15.577 -0.368 5.172 -0.433 -1.103 O9 JES 9 JES P P1 P 0 1 N N N N N N 1.338 -14.523 -0.764 4.059 0.170 -0.108 P JES 10 JES O8 O3 O 0 1 N N N N N N 0.718 -13.252 -1.364 4.501 -0.097 1.416 O8 JES 11 JES O7 O4 O 0 1 N N N N N N 1.999 -13.999 0.617 2.644 -0.543 -0.390 O7 JES 12 JES O6 O5 O 0 1 N N N N N N 2.973 -12.743 2.925 0.508 -2.384 0.168 O6 JES 13 JES O4 O6 O 0 1 N N N N N N 1.513 -9.617 1.037 -1.991 -2.755 0.320 O4 JES 14 JES C3 C8 C 0 1 N N R N N N 3.533 -8.717 0.951 -3.507 -0.873 0.425 C3 JES 15 JES O3 O7 O 0 1 N N N N N N 2.964 -7.740 0.023 -4.594 -1.644 -0.091 O3 JES 16 JES O2 O8 O 0 1 N N N N N N 5.114 -9.202 -0.579 -3.745 0.666 -1.426 O2 JES 17 JES O5 O9 O 0 1 N N N N N N 4.630 -11.059 1.628 -1.262 0.817 -0.039 O5 JES 18 JES O32 O10 O 0 1 N N N N N N 7.622 -10.165 2.158 -1.517 3.615 0.571 O32 JES 19 JES H6 H1 H 0 1 N N N N N N 1.549 -11.849 1.887 0.228 -0.981 -1.323 H6 JES 20 JES H5 H2 H 0 1 N N N N N N 3.209 -10.378 2.828 -0.981 -0.585 1.452 H5 JES 21 JES H4 H3 H 0 1 N N N N N N 3.012 -10.318 -0.140 -2.215 -1.396 -1.221 H4 JES 22 JES H2 H4 H 0 1 N N N N N N 5.381 -7.916 0.932 -4.578 0.998 0.437 H2 JES 23 JES H11 H5 H 0 1 N N N N N N 5.465 -9.442 2.612 -2.424 1.366 1.579 H11 JES 24 JES H1 H6 H 0 1 N N N N N N 6.458 -11.143 0.764 -2.527 2.874 -1.072 H1 JES 25 JES H7 H7 H 0 1 N N N N N N 6.785 -9.409 0.431 -3.538 3.250 0.345 H7 JES 26 JES H8 H8 H 0 1 N N N N N N 3.892 -13.267 0.674 1.217 0.891 0.030 H8 JES 27 JES H9 H9 H 0 1 N N N N N N 2.691 -12.293 -0.239 1.543 -0.272 1.337 H9 JES 28 JES H10 H10 H 0 1 N N N N N N 0.596 -16.425 -0.694 6.051 -0.048 -0.989 H10 JES 29 JES H12 H11 H 0 1 N N N N N N 1.181 -13.019 -2.160 4.604 -1.032 1.638 H12 JES 30 JES H13 H12 H 0 1 N N N N N N 2.824 -12.204 3.693 0.567 -2.504 1.125 H13 JES 31 JES H14 H13 H 0 1 N N N N N N 1.018 -10.426 0.977 -2.687 -3.368 0.046 H14 JES 32 JES H3 H14 H 0 1 N N N N N N 3.402 -8.315 1.966 -3.498 -0.937 1.513 H3 JES 33 JES H15 H15 H 0 1 N N N N N N 2.035 -7.643 0.195 -5.463 -1.356 0.220 H15 JES 34 JES H16 H16 H 0 1 N N N N N N 6.048 -9.304 -0.717 -3.847 1.565 -1.766 H16 JES 35 JES H17 H17 H 0 1 N N N N N N 8.424 -10.402 1.708 -1.532 4.547 0.312 H17 JES 36 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal JES O10 P DOUB N N 1 JES O8 P SING N N 2 JES P O9 SING N N 3 JES P O7 SING N N 4 JES O2 C2 SING N N 5 JES O3 C3 SING N N 6 JES O7 C7 SING N N 7 JES C7 C6 SING N N 8 JES C2 C3 SING N N 9 JES C2 C1 SING N N 10 JES C4 C3 SING N N 11 JES C4 O4 SING N N 12 JES C4 C5 SING N N 13 JES C8 C1 SING N N 14 JES C8 O32 SING N N 15 JES C1 O5 SING N N 16 JES O5 C5 SING N N 17 JES C5 C6 SING N N 18 JES C6 O6 SING N N 19 JES C6 H6 SING N N 20 JES C5 H5 SING N N 21 JES C4 H4 SING N N 22 JES C2 H2 SING N N 23 JES C1 H11 SING N N 24 JES C8 H1 SING N N 25 JES C8 H7 SING N N 26 JES C7 H8 SING N N 27 JES C7 H9 SING N N 28 JES O9 H10 SING N N 29 JES O8 H12 SING N N 30 JES O6 H13 SING N N 31 JES O4 H14 SING N N 32 JES C3 H3 SING N N 33 JES O3 H15 SING N N 34 JES O2 H16 SING N N 35 JES O32 H17 SING N N 36 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor JES SMILES ACDLabs 12.01 "O=P(O)(OCC(O)C1C(C(C(C(O1)CO)O)O)O)O" JES InChI InChI 1.03 "InChI=1S/C8H17O10P/c9-1-4-5(11)6(12)7(13)8(18-4)3(10)2-17-19(14,15)16/h3-13H,1-2H2,(H2,14,15,16)/t3-,4+,5-,6-,7+,8-/m1/s1" JES InChIKey InChI 1.03 FABAFTARSLBVBI-PPOMMRCSSA-N JES SMILES_CANONICAL CACTVS 3.385 "OC[C@@H]1O[C@H]([C@H](O)CO[P](O)(O)=O)[C@@H](O)[C@H](O)[C@@H]1O" JES SMILES CACTVS 3.385 "OC[CH]1O[CH]([CH](O)CO[P](O)(O)=O)[CH](O)[CH](O)[CH]1O" JES SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C([C@H]1[C@H]([C@H]([C@@H]([C@H](O1)[C@@H](COP(=O)(O)O)O)O)O)O)O" JES SMILES "OpenEye OEToolkits" 2.0.6 "C(C1C(C(C(C(O1)C(COP(=O)(O)O)O)O)O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier JES "SYSTEMATIC NAME" ACDLabs 12.01 2,6-anhydro-8-O-phosphono-D-erythro-D-galacto-octitol JES "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "[(2~{R})-2-[(2~{R},3~{S},4~{R},5~{S},6~{S})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]-2-oxidanyl-ethyl] dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site JES "Create component" 2018-09-05 RCSB JES "Modify linking type" 2026-10-06 RCSB JES "Initial release" 2026-10-14 RCSB #