data_JFF # _chem_comp.id JFF _chem_comp.name "(2R)-3-[2-(aminomethyl)-3-azanyl-1-[4-[2-(2-chloranylethanoylamino)ethylcarbamoyl]phenyl]prop-1-enyl]sulfanyl-2-(carboxyamino)propanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H26 Cl N5 O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-08-10 _chem_comp.pdbx_modified_date 2023-11-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 487.958 _chem_comp.one_letter_code ? _chem_comp.three_letter_code JFF _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7Y8D _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal JFF C1 C1 C 0 1 N N N N N N 46.896 19.293 -42.211 -2.821 1.886 0.102 C1 JFF 1 JFF C9 C2 C 0 1 Y N N N N N 45.515 18.651 -42.212 -1.492 1.382 0.513 C9 JFF 2 JFF C10 C3 C 0 1 Y N N N N N 44.564 19.033 -41.130 -1.329 0.786 1.765 C10 JFF 3 JFF C11 C4 C 0 1 Y N N N N N 43.204 18.395 -41.067 -0.093 0.316 2.149 C11 JFF 4 JFF C12 C5 C 0 1 Y N N N N N 42.812 17.435 -42.170 0.998 0.436 1.285 C12 JFF 5 JFF C13 C6 C 0 1 Y N N N N N 43.791 17.011 -43.258 0.834 1.033 0.032 C13 JFF 6 JFF C14 C7 C 0 1 Y N N N N N 45.146 17.659 -43.296 -0.403 1.497 -0.352 C14 JFF 7 JFF C15 C8 C 0 1 N N N N N N 41.518 16.673 -42.062 2.325 -0.067 1.696 C15 JFF 8 JFF O5 O1 O 0 1 N N N N N N 41.578 15.604 -42.502 2.467 -0.586 2.786 O5 JFF 9 JFF N4 N1 N 0 1 N N N N N N 40.330 16.889 -41.305 3.377 0.049 0.862 N4 JFF 10 JFF C16 C9 C 0 1 N N N N N N 39.341 15.778 -41.348 4.693 -0.451 1.270 C16 JFF 11 JFF C17 C10 C 0 1 N N N N N N 39.630 14.535 -40.452 5.704 -0.198 0.149 C17 JFF 12 JFF N5 N2 N 0 1 N N N N N N 40.653 14.946 -39.599 7.019 -0.697 0.557 N5 JFF 13 JFF C18 C11 C 0 1 N N N N N N 41.777 14.350 -38.919 8.072 -0.581 -0.276 C18 JFF 14 JFF O6 O2 O 0 1 N N N N N N 42.343 15.292 -38.414 7.930 -0.064 -1.364 O6 JFF 15 JFF C19 C12 C 0 1 N N N N N N 42.294 12.919 -38.737 9.425 -1.094 0.143 C19 JFF 16 JFF H4 H4 H 0 1 N N N N N N 44.851 19.767 -40.392 -2.173 0.694 2.433 H4 JFF 17 JFF H5 H5 H 0 1 N N N N N N 42.525 18.616 -40.257 0.033 -0.144 3.118 H5 JFF 18 JFF H6 H6 H 0 1 N N N N N N 43.517 16.261 -43.986 1.678 1.125 -0.637 H6 JFF 19 JFF H7 H7 H 0 1 N N N N N N 45.846 17.421 -44.084 -0.530 1.958 -1.321 H7 JFF 20 JFF H8 H8 H 0 1 N N N N N N 40.172 17.727 -40.782 3.264 0.462 -0.008 H8 JFF 21 JFF H9 H9 H 0 1 N N N N N N 38.368 16.189 -41.041 5.014 0.068 2.173 H9 JFF 22 JFF H10 H10 H 0 1 N N N N N N 39.280 15.429 -42.389 4.630 -1.520 1.468 H10 JFF 23 JFF H11 H11 H 0 1 N N N N N N 38.735 14.254 -39.878 5.382 -0.716 -0.754 H11 JFF 24 JFF H12 H12 H 0 1 N N N N N N 39.955 13.682 -41.065 5.766 0.873 -0.049 H12 JFF 25 JFF H13 H13 H 0 1 N N N N N N 40.590 15.925 -39.405 7.133 -1.110 1.427 H13 JFF 26 JFF H14 H14 H 0 1 N N N N N N 42.025 12.540 -37.740 9.747 -0.576 1.046 H14 JFF 27 JFF H15 H15 H 0 1 N N N N N N 41.869 12.259 -39.507 9.363 -2.164 0.341 H15 JFF 28 JFF S1 S1 S 0 1 N N N N N N ? ? ? -4.236 0.842 0.223 S1 JFF 29 JFF C2 C13 C 0 1 N N N N N N ? ? ? -2.949 3.134 -0.356 C2 JFF 30 JFF C3 C14 C 0 1 N N N N N N ? ? ? -1.724 3.979 -0.593 C3 JFF 31 JFF C4 C15 C 0 1 N N N N N N ? ? ? -4.319 3.696 -0.637 C4 JFF 32 JFF N2 N3 N 0 1 N N N N N N ? ? ? -1.405 3.987 -2.027 N2 JFF 33 JFF N3 N4 N 0 1 N N N N N N ? ? ? -4.796 4.433 0.541 N3 JFF 34 JFF C5 C16 C 0 1 N N N N N N ? ? ? -3.886 -0.461 -0.989 C5 JFF 35 JFF C6 C17 C 0 1 N N R N N N ? ? ? -4.979 -1.530 -0.919 C6 JFF 36 JFF C7 C18 C 0 1 N N N N N N ? ? ? -4.688 -2.613 -1.926 C7 JFF 37 JFF O4 O4 O 0 1 N N N N N N ? ? ? -4.524 -3.752 -1.558 O4 JFF 38 JFF O3 O3 O 0 1 N N N N N N ? ? ? -4.611 -2.312 -3.232 O3 JFF 39 JFF N1 N5 N 0 1 N N N N N N ? ? ? -5.010 -2.109 0.426 N1 JFF 40 JFF C8 C19 C 0 1 N N N N N N ? ? ? -6.145 -2.668 0.892 C8 JFF 41 JFF O1 O5 O 0 1 N N N N N N ? ? ? -6.174 -3.200 2.129 O1 JFF 42 JFF O2 O6 O 0 1 N N N N N N ? ? ? -7.141 -2.691 0.197 O2 JFF 43 JFF CL1 CL1 CL 0 0 N N N N N N 44.140 13.012 -38.915 10.617 -0.796 -1.177 CL1 JFF 44 JFF H1 H1 H 0 1 N N N N N N ? ? ? -1.916 4.998 -0.258 H1 JFF 45 JFF H2 H2 H 0 1 N N N N N N ? ? ? -0.884 3.565 -0.036 H2 JFF 46 JFF H3 H3 H 0 1 N N N N N N ? ? ? -4.266 4.372 -1.491 H3 JFF 47 JFF H16 H16 H 0 1 N N N N N N ? ? ? -5.008 2.882 -0.860 H16 JFF 48 JFF H17 H17 H 0 1 N N N N N N ? ? ? -0.527 4.455 -2.199 H17 JFF 49 JFF H18 H18 H 0 1 N N N N N N ? ? ? -1.394 3.050 -2.400 H18 JFF 50 JFF H19 H19 H 0 1 N N N N N N ? ? ? -4.141 5.153 0.807 H19 JFF 51 JFF H20 H20 H 0 1 N N N N N N ? ? ? -5.713 4.820 0.378 H20 JFF 52 JFF H21 H21 H 0 1 N N N N N N ? ? ? -3.862 -0.030 -1.990 H21 JFF 53 JFF H22 H22 H 0 1 N N N N N N ? ? ? -2.920 -0.915 -0.766 H22 JFF 54 JFF H23 H23 H 0 1 N N N N N N ? ? ? -5.945 -1.076 -1.142 H23 JFF 55 JFF H24 H24 H 0 1 N N N N N N ? ? ? -4.423 -3.040 -3.840 H24 JFF 56 JFF H25 H25 H 0 1 N N N N N N ? ? ? -4.215 -2.090 0.981 H25 JFF 57 JFF H26 H26 H 0 1 N N N N N N ? ? ? -7.010 -3.590 2.420 H26 JFF 58 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal JFF C14 C13 DOUB Y N 1 JFF C14 C9 SING Y N 2 JFF C13 C12 SING Y N 3 JFF O5 C15 DOUB N N 4 JFF C9 C1 SING N N 5 JFF C9 C10 DOUB Y N 6 JFF C12 C15 SING N N 7 JFF C12 C11 DOUB Y N 8 JFF C15 N4 SING N N 9 JFF C16 N4 SING N N 10 JFF C16 C17 SING N N 11 JFF C10 C11 SING Y N 12 JFF C17 N5 SING N N 13 JFF N5 C18 SING N N 14 JFF C18 C19 SING N N 15 JFF C18 O6 DOUB N N 16 JFF C10 H4 SING N N 17 JFF C11 H5 SING N N 18 JFF C13 H6 SING N N 19 JFF C14 H7 SING N N 20 JFF N4 H8 SING N N 21 JFF C16 H9 SING N N 22 JFF C16 H10 SING N N 23 JFF C17 H11 SING N N 24 JFF C17 H12 SING N N 25 JFF N5 H13 SING N N 26 JFF C19 H14 SING N N 27 JFF C19 H15 SING N N 28 JFF C1 S1 SING N N 29 JFF C1 C2 DOUB N N 30 JFF C2 C3 SING N N 31 JFF C2 C4 SING N N 32 JFF C3 N2 SING N N 33 JFF C4 N3 SING N N 34 JFF S1 C5 SING N N 35 JFF C5 C6 SING N N 36 JFF C6 C7 SING N N 37 JFF C7 O4 DOUB N N 38 JFF C7 O3 SING N N 39 JFF C6 N1 SING N N 40 JFF N1 C8 SING N N 41 JFF C8 O1 SING N N 42 JFF C8 O2 DOUB N N 43 JFF C19 CL1 SING N N 44 JFF C3 H1 SING N N 45 JFF C3 H2 SING N N 46 JFF C4 H3 SING N N 47 JFF C4 H16 SING N N 48 JFF N2 H17 SING N N 49 JFF N2 H18 SING N N 50 JFF N3 H19 SING N N 51 JFF N3 H20 SING N N 52 JFF C5 H21 SING N N 53 JFF C5 H22 SING N N 54 JFF C6 H23 SING N N 55 JFF O3 H24 SING N N 56 JFF N1 H25 SING N N 57 JFF O1 H26 SING N N 58 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor JFF InChI InChI 1.06 "InChI=1S/C19H26ClN5O6S/c20-7-15(26)23-5-6-24-17(27)12-3-1-11(2-4-12)16(13(8-21)9-22)32-10-14(18(28)29)25-19(30)31/h1-4,14,25H,5-10,21-22H2,(H,23,26)(H,24,27)(H,28,29)(H,30,31)" JFF InChIKey InChI 1.06 SHRIZMDECXYRNC-UHFFFAOYSA-N JFF SMILES_CANONICAL CACTVS 3.385 "NCC(CN)=C(SCC(NC(O)=O)C(O)=O)c1ccc(cc1)C(=O)NCCNC(=O)CCl" JFF SMILES CACTVS 3.385 "NCC(CN)=C(SCC(NC(O)=O)C(O)=O)c1ccc(cc1)C(=O)NCCNC(=O)CCl" JFF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C(=C(CN)CN)SC[C@H](C(=O)O)NC(=O)O)C(=O)NCCNC(=O)CCl" JFF SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C(=C(CN)CN)SCC(C(=O)O)NC(=O)O)C(=O)NCCNC(=O)CCl" # _pdbx_chem_comp_identifier.comp_id JFF _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R})-3-[2-(aminomethyl)-3-azanyl-1-[4-[2-(2-chloranylethanoylamino)ethylcarbamoyl]phenyl]prop-1-enyl]sulfanyl-2-(carboxyamino)propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site JFF "Create component" 2022-08-10 PDBJ JFF "Initial release" 2023-11-15 RCSB #