data_JFS # _chem_comp.id JFS _chem_comp.name "[4-(1H-benzimidazol-1-yl)phenyl]methanol" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H12 N2 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-09-10 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 224.258 _chem_comp.one_letter_code ? _chem_comp.three_letter_code JFS _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5QDK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal JFS C10 C1 C 0 1 Y N N N N N 32.739 -12.309 -29.503 0.566 -0.372 0.021 C10 JFS 1 JFS C13 C2 C 0 1 Y N N N N N 34.458 -14.591 -29.350 3.233 0.335 0.225 C13 JFS 2 JFS C15 C3 C 0 1 Y N N N N N 32.877 -13.170 -30.582 1.061 0.694 -0.717 C15 JFS 3 JFS C01 C4 C 0 1 Y N N N N N 28.826 -9.442 -27.514 -4.402 1.230 0.131 C01 JFS 4 JFS C02 C5 C 0 1 Y N N N N N 29.401 -10.537 -26.902 -3.278 2.026 0.305 C02 JFS 5 JFS C03 C6 C 0 1 Y N N N N N 30.433 -11.182 -27.528 -2.016 1.474 0.253 C03 JFS 6 JFS C04 C7 C 0 1 Y N N N N N 30.904 -10.785 -28.723 -1.870 0.112 0.023 C04 JFS 7 JFS C05 C8 C 0 1 Y N N N N N 30.277 -9.640 -29.358 -3.008 -0.693 -0.154 C05 JFS 8 JFS C06 C9 C 0 1 Y N N N N N 29.266 -9.035 -28.692 -4.278 -0.112 -0.091 C06 JFS 9 JFS N07 N1 N 0 1 Y N N N N N 30.906 -9.400 -30.574 -2.568 -1.961 -0.357 N07 JFS 10 JFS C08 C10 C 0 1 Y N N N N N 31.801 -10.332 -30.682 -1.268 -1.987 -0.318 C08 JFS 11 JFS N09 N2 N 0 1 Y N N N N N 31.864 -11.199 -29.626 -0.783 -0.734 -0.086 N09 JFS 12 JFS C11 C11 C 0 1 Y N N N N N 33.450 -12.593 -28.362 1.412 -1.083 0.862 C11 JFS 13 JFS C12 C12 C 0 1 Y N N N N N 34.280 -13.678 -28.310 2.743 -0.728 0.961 C12 JFS 14 JFS C14 C13 C 0 1 Y N N N N N 33.702 -14.277 -30.509 2.393 1.045 -0.613 C14 JFS 15 JFS C16 C14 C 0 1 N N N N N N 35.426 -15.812 -29.260 4.686 0.721 0.336 C16 JFS 16 JFS O17 O1 O 0 1 N N N N N N 35.104 -16.842 -30.130 5.445 0.004 -0.640 O17 JFS 17 JFS H151 H1 H 0 0 N N N N N N 32.332 -12.972 -31.493 0.406 1.249 -1.372 H151 JFS 18 JFS H011 H2 H 0 0 N N N N N N 28.016 -8.917 -27.030 -5.384 1.676 0.174 H011 JFS 19 JFS H021 H3 H 0 0 N N N N N N 29.042 -10.880 -25.943 -3.393 3.085 0.483 H021 JFS 20 JFS H031 H4 H 0 0 N N N N N N 30.884 -12.037 -27.047 -1.145 2.097 0.389 H031 JFS 21 JFS H061 H5 H 0 0 N N N N N N 28.795 -8.176 -29.146 -5.159 -0.722 -0.225 H061 JFS 22 JFS H081 H6 H 0 0 N N N N N N 32.449 -10.417 -31.542 -0.662 -2.871 -0.449 H081 JFS 23 JFS H111 H7 H 0 0 N N N N N N 33.352 -11.953 -27.498 1.030 -1.913 1.438 H111 JFS 24 JFS H121 H8 H 0 0 N N N N N N 34.837 -13.840 -27.399 3.402 -1.280 1.615 H121 JFS 25 JFS H141 H9 H 0 0 N N N N N N 33.774 -14.928 -31.368 2.779 1.875 -1.187 H141 JFS 26 JFS H162 H10 H 0 0 N N N N N N 35.397 -16.203 -28.232 4.792 1.792 0.164 H162 JFS 27 JFS H161 H11 H 0 0 N N N N N N 36.444 -15.466 -29.492 5.052 0.475 1.333 H161 JFS 28 JFS H171 H12 H 0 0 N N N N N N 35.728 -17.551 -30.027 6.391 0.204 -0.626 H171 JFS 29 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal JFS C08 N07 DOUB Y N 1 JFS C08 N09 SING Y N 2 JFS C15 C14 DOUB Y N 3 JFS C15 C10 SING Y N 4 JFS N07 C05 SING Y N 5 JFS C14 C13 SING Y N 6 JFS O17 C16 SING N N 7 JFS N09 C10 SING N N 8 JFS N09 C04 SING Y N 9 JFS C10 C11 DOUB Y N 10 JFS C05 C04 DOUB Y N 11 JFS C05 C06 SING Y N 12 JFS C13 C16 SING N N 13 JFS C13 C12 DOUB Y N 14 JFS C04 C03 SING Y N 15 JFS C06 C01 DOUB Y N 16 JFS C11 C12 SING Y N 17 JFS C03 C02 DOUB Y N 18 JFS C01 C02 SING Y N 19 JFS C15 H151 SING N N 20 JFS C01 H011 SING N N 21 JFS C02 H021 SING N N 22 JFS C03 H031 SING N N 23 JFS C06 H061 SING N N 24 JFS C08 H081 SING N N 25 JFS C11 H111 SING N N 26 JFS C12 H121 SING N N 27 JFS C14 H141 SING N N 28 JFS C16 H162 SING N N 29 JFS C16 H161 SING N N 30 JFS O17 H171 SING N N 31 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor JFS SMILES ACDLabs 12.01 "c1(ccc(CO)cc1)n3c2ccccc2nc3" JFS InChI InChI 1.03 "InChI=1S/C14H12N2O/c17-9-11-5-7-12(8-6-11)16-10-15-13-3-1-2-4-14(13)16/h1-8,10,17H,9H2" JFS InChIKey InChI 1.03 IRZKUEWQJPIBJF-UHFFFAOYSA-N JFS SMILES_CANONICAL CACTVS 3.385 "OCc1ccc(cc1)n2cnc3ccccc23" JFS SMILES CACTVS 3.385 "OCc1ccc(cc1)n2cnc3ccccc23" JFS SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccc2c(c1)ncn2c3ccc(cc3)CO" JFS SMILES "OpenEye OEToolkits" 2.0.6 "c1ccc2c(c1)ncn2c3ccc(cc3)CO" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier JFS "SYSTEMATIC NAME" ACDLabs 12.01 "[4-(1H-benzimidazol-1-yl)phenyl]methanol" JFS "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "[4-(benzimidazol-1-yl)phenyl]methanol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site JFS "Create component" 2018-09-10 RCSB JFS "Initial release" 2018-10-10 RCSB JFS "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id JFS _pdbx_chem_comp_pcm.modified_residue_id LYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C16 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom NZ _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #