data_JHH # _chem_comp.id JHH _chem_comp.name Cyclostreptin _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H34 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-02-26 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 402.524 _chem_comp.one_letter_code ? _chem_comp.three_letter_code JHH _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6QTN _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal JHH C1 C1 C 0 1 N N S N N N -2.123 61.365 23.054 -0.894 -0.193 -0.489 C1 JHH 1 JHH C10 C2 C 0 1 N N N N N N -2.816 59.659 24.562 -0.214 -1.919 1.065 C10 JHH 2 JHH C11 C3 C 0 1 N N R N N N -4.157 60.987 19.931 -4.600 0.236 -0.390 C11 JHH 3 JHH C12 C4 C 0 1 N N R N N N -4.422 62.486 20.213 -4.172 1.629 0.137 C12 JHH 4 JHH C13 C5 C 0 1 N N S N N N -3.659 62.825 21.519 -2.619 1.660 0.089 C13 JHH 5 JHH C16 C6 C 0 1 N N N N N N -3.920 63.363 19.055 -4.747 2.730 -0.757 C16 JHH 6 JHH C17 C7 C 0 1 N N R N N N -1.255 62.950 24.782 1.339 0.892 -0.600 C17 JHH 7 JHH C18 C8 C 0 1 N N R N N N -0.124 62.227 25.552 2.202 -0.197 -1.195 C18 JHH 8 JHH C2 C9 C 0 1 N N R N N N -1.838 59.899 23.409 -0.740 -1.730 -0.380 C2 JHH 9 JHH C20 C10 C 0 1 N N S N N N -1.905 60.954 26.679 2.193 -1.118 1.050 C20 JHH 10 JHH C22 C11 C 0 1 N N N N N N -1.982 59.652 27.512 2.551 -2.411 1.803 C22 JHH 11 JHH C23 C12 C 0 1 N N N N N N -1.676 64.279 25.381 2.093 2.062 -0.055 C23 JHH 12 JHH C25 C13 C 0 1 N N S N N N -0.452 63.852 27.425 4.228 0.991 -0.407 C25 JHH 13 JHH C26 C14 C 0 1 N N R N N N 0.580 63.225 26.472 3.553 0.397 -1.605 C26 JHH 14 JHH C28 C15 C 0 1 N N N N N N 1.754 62.569 27.221 4.426 -0.694 -2.220 C28 JHH 15 JHH C29 C16 C 0 1 N N N N N N -2.370 62.039 27.690 3.093 0.005 1.611 C29 JHH 16 JHH C3 C17 C 0 1 N N N N N N -2.065 58.925 22.270 -2.038 -2.453 -0.535 C3 JHH 17 JHH C30 C18 C 0 1 N N N N N N -1.302 62.935 28.334 4.377 0.097 0.807 C30 JHH 18 JHH C4 C19 C 0 1 N N N N N N -2.561 59.299 21.084 -3.207 -1.906 -0.735 C4 JHH 19 JHH C5 C20 C 0 1 N N R N N N -2.920 60.725 20.795 -3.307 -0.427 -0.845 C5 JHH 20 JHH C6 C21 C 0 1 N N R N N N -3.307 61.441 22.079 -2.234 0.179 0.104 C6 JHH 21 JHH C7 C22 C 0 1 N N N N N N -1.701 57.498 22.557 -1.997 -3.957 -0.455 C7 JHH 22 JHH C8 C23 C 0 1 N N S N N N -2.454 62.052 24.398 0.272 0.377 0.343 C8 JHH 23 JHH C9 C24 C 0 1 N N R N N N -2.827 60.946 25.419 0.739 -0.731 1.292 C9 JHH 24 JHH O14 O1 O 0 1 N N N N N N -5.262 60.198 20.381 -5.211 -0.525 0.653 O14 JHH 25 JHH O15 O2 O 0 1 N N N N N N -4.467 63.579 22.423 -2.101 2.335 1.239 O15 JHH 26 JHH O19 O3 O 0 1 N N N N N N -0.535 61.066 26.289 2.414 -1.300 -0.339 O19 JHH 27 JHH O24 O4 O 0 1 N N N N N N -1.376 64.624 26.660 3.426 2.135 0.036 O24 JHH 28 JHH O27 O5 O 0 1 N N N N N N -2.303 65.097 24.717 1.441 3.025 0.335 O27 JHH 29 JHH H1 H1 H 0 1 N N N N N N -1.231 61.827 22.604 -0.823 0.132 -1.526 H1 JHH 30 JHH H2 H2 H 0 1 N N N N N N -3.823 59.459 24.168 -1.056 -1.847 1.768 H2 JHH 31 JHH H3 H3 H 0 1 N N N N N N -2.483 58.804 25.168 0.251 -2.887 1.169 H3 JHH 32 JHH H4 H4 H 0 1 N N N N N N -3.933 60.826 18.866 -5.286 0.344 -1.232 H4 JHH 33 JHH H5 H5 H 0 1 N N N N N N -5.500 62.649 20.363 -4.517 1.764 1.162 H5 JHH 34 JHH H6 H6 H 0 1 N N N N N N -2.735 63.367 21.270 -2.271 2.141 -0.826 H6 JHH 35 JHH H7 H7 H 0 1 N N N N N N -4.121 64.421 19.282 -5.835 2.684 -0.736 H7 JHH 36 JHH H8 H8 H 0 1 N N N N N N -2.838 63.215 18.926 -4.417 3.703 -0.392 H8 JHH 37 JHH H9 H9 H 0 1 N N N N N N -4.442 63.081 18.129 -4.396 2.588 -1.779 H9 JHH 38 JHH H10 H10 H 0 1 N N N N N N -0.797 63.216 23.818 0.774 1.306 -1.462 H10 JHH 39 JHH H11 H11 H 0 1 N N N N N N 0.615 61.909 24.802 1.711 -0.559 -2.106 H11 JHH 40 JHH H12 H12 H 0 1 N N N N N N -0.806 59.805 23.777 -0.010 -2.093 -1.100 H12 JHH 41 JHH H13 H13 H 0 1 N N N N N N -1.309 59.730 28.379 2.371 -2.273 2.868 H13 JHH 42 JHH H14 H14 H 0 1 N N N N N N -3.014 59.501 27.861 1.934 -3.230 1.433 H14 JHH 43 JHH H15 H15 H 0 1 N N N N N N -1.678 58.799 26.888 3.603 -2.647 1.640 H15 JHH 44 JHH H16 H16 H 0 1 N N N N N N 0.100 64.534 28.089 5.232 1.338 -0.709 H16 JHH 45 JHH H17 H17 H 0 1 N N N N N N 0.990 64.030 25.845 3.382 1.180 -2.347 H17 JHH 46 JHH H18 H18 H 0 1 N N N N N N 2.236 63.313 27.872 3.929 -1.105 -3.099 H18 JHH 47 JHH H19 H19 H 0 1 N N N N N N 1.379 61.736 27.833 5.387 -0.270 -2.511 H19 JHH 48 JHH H20 H20 H 0 1 N N N N N N 2.486 62.189 26.494 4.585 -1.487 -1.489 H20 JHH 49 JHH H21 H21 H 0 1 N N N N N N -3.073 62.699 27.160 2.561 0.945 1.630 H21 JHH 50 JHH H22 H22 H 0 1 N N N N N N -2.896 61.521 28.505 3.352 -0.257 2.649 H22 JHH 51 JHH H23 H23 H 0 1 N N N N N N -0.604 62.273 28.868 4.688 -0.901 0.497 H23 JHH 52 JHH H24 H24 H 0 1 N N N N N N -1.818 63.584 29.057 5.167 0.507 1.449 H24 JHH 53 JHH H25 H25 H 0 1 N N N N N N -2.706 58.554 20.316 -4.089 -2.523 -0.828 H25 JHH 54 JHH H26 H26 H 0 1 N N N N N N -2.055 61.235 20.345 -3.088 -0.126 -1.872 H26 JHH 55 JHH H27 H27 H 0 1 N N N N N N -4.197 60.974 22.525 -2.337 -0.231 1.107 H27 JHH 56 JHH H28 H28 H 0 1 N N N N N N -1.316 57.417 23.584 -2.137 -4.270 0.580 H28 JHH 57 JHH H29 H29 H 0 1 N N N N N N -2.593 56.863 22.449 -2.793 -4.376 -1.071 H29 JHH 58 JHH H30 H30 H 0 1 N N N N N N -0.928 57.167 21.848 -1.033 -4.315 -0.815 H30 JHH 59 JHH H31 H31 H 0 1 N N N N N N -3.334 62.695 24.250 -0.102 1.213 0.944 H31 JHH 60 JHH H32 H32 H 0 1 N N N N N N -3.859 61.125 25.754 0.627 -0.379 2.331 H32 JHH 61 JHH H33 H33 H 0 1 N N N N N N -5.090 59.281 20.204 -6.016 -0.126 1.012 H33 JHH 62 JHH H34 H34 H 0 1 N N N N N N -3.970 63.769 23.210 -2.378 3.259 1.311 H34 JHH 63 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal JHH C16 C12 SING N N 1 JHH C11 C12 SING N N 2 JHH C11 O14 SING N N 3 JHH C11 C5 SING N N 4 JHH C12 C13 SING N N 5 JHH C5 C4 SING N N 6 JHH C5 C6 SING N N 7 JHH C4 C3 DOUB N N 8 JHH C13 C6 SING N N 9 JHH C13 O15 SING N N 10 JHH C6 C1 SING N N 11 JHH C3 C7 SING N N 12 JHH C3 C2 SING N N 13 JHH C1 C2 SING N N 14 JHH C1 C8 SING N N 15 JHH C2 C10 SING N N 16 JHH C8 C17 SING N N 17 JHH C8 C9 SING N N 18 JHH C10 C9 SING N N 19 JHH O27 C23 DOUB N N 20 JHH C17 C23 SING N N 21 JHH C17 C18 SING N N 22 JHH C23 O24 SING N N 23 JHH C9 C20 SING N N 24 JHH C18 O19 SING N N 25 JHH C18 C26 SING N N 26 JHH O19 C20 SING N N 27 JHH C26 C28 SING N N 28 JHH C26 C25 SING N N 29 JHH O24 C25 SING N N 30 JHH C20 C22 SING N N 31 JHH C20 C29 SING N N 32 JHH C25 C30 SING N N 33 JHH C29 C30 SING N N 34 JHH C1 H1 SING N N 35 JHH C10 H2 SING N N 36 JHH C10 H3 SING N N 37 JHH C11 H4 SING N N 38 JHH C12 H5 SING N N 39 JHH C13 H6 SING N N 40 JHH C16 H7 SING N N 41 JHH C16 H8 SING N N 42 JHH C16 H9 SING N N 43 JHH C17 H10 SING N N 44 JHH C18 H11 SING N N 45 JHH C2 H12 SING N N 46 JHH C22 H13 SING N N 47 JHH C22 H14 SING N N 48 JHH C22 H15 SING N N 49 JHH C25 H16 SING N N 50 JHH C26 H17 SING N N 51 JHH C28 H18 SING N N 52 JHH C28 H19 SING N N 53 JHH C28 H20 SING N N 54 JHH C29 H21 SING N N 55 JHH C29 H22 SING N N 56 JHH C30 H23 SING N N 57 JHH C30 H24 SING N N 58 JHH C4 H25 SING N N 59 JHH C5 H26 SING N N 60 JHH C6 H27 SING N N 61 JHH C7 H28 SING N N 62 JHH C7 H29 SING N N 63 JHH C7 H30 SING N N 64 JHH C8 H31 SING N N 65 JHH C9 H32 SING N N 66 JHH O14 H33 SING N N 67 JHH O15 H34 SING N N 68 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor JHH InChI InChI 1.03 "InChI=1S/C24H34O5/c1-9-7-13-17(21(26)11(3)20(13)25)16-12(9)8-14-18(16)19-22-10(2)15(28-23(19)27)5-6-24(14,4)29-22/h7,10-22,25-26H,5-6,8H2,1-4H3/t10-,11+,12+,13-,14-,15+,16+,17+,18-,19-,20+,21-,22-,24+/m1/s1" JHH InChIKey InChI 1.03 ABHXDOVMRGJWAK-HQNRQHHRSA-N JHH SMILES_CANONICAL CACTVS 3.385 "C[C@H]1[C@H](O)[C@@H]2C=C(C)[C@@H]3C[C@@H]4[C@H]([C@@H]3[C@H]2[C@@H]1O)[C@@H]5[C@@H]6O[C@@]4(C)CC[C@H](OC5=O)[C@H]6C" JHH SMILES CACTVS 3.385 "C[CH]1[CH](O)[CH]2C=C(C)[CH]3C[CH]4[CH]([CH]3[CH]2[CH]1O)[CH]5[CH]6O[C]4(C)CC[CH](OC5=O)[CH]6C" JHH SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H]1[C@@H]2CC[C@]3([C@@H]4C[C@@H]5[C@H]([C@@H]4[C@H]([C@@H]1O3)C(=O)O2)[C@@H]6[C@@H](C=C5C)[C@H]([C@@H]([C@H]6O)C)O)C" JHH SMILES "OpenEye OEToolkits" 2.0.7 "CC1C2CCC3(C4CC5C(C4C(C1O3)C(=O)O2)C6C(C=C5C)C(C(C6O)C)O)C" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site JHH "Create component" 2019-02-26 EBI JHH "Initial release" 2019-04-03 RCSB JHH "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id JHH _pdbx_chem_comp_pcm.modified_residue_id HIS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C18 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom NE2 _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #