data_JIH # _chem_comp.id JIH _chem_comp.name "[4-[(2~{S})-3-[[3-(2-chloranylethanoylamino)phenyl]methylamino]-2-[2-(4-fluorophenyl)ethanoylamino]-3-oxidanylidene-propyl]phenyl] dihydrogen phosphate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H26 Cl F N3 O7 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-04-27 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 577.926 _chem_comp.one_letter_code ? _chem_comp.three_letter_code JIH _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7ZLM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal JIH N N1 N 0 1 N N N N N N 11.889 43.519 -11.073 1.442 -1.011 1.495 N JIH 1 JIH CA C1 C 0 1 N N S N N N 10.437 43.439 -10.840 0.458 -0.271 0.701 CA JIH 2 JIH C C2 C 0 1 N N N N N N 9.765 44.179 -11.981 -0.652 -1.201 0.284 C JIH 3 JIH O O1 O 0 1 N N N N N N 10.083 45.342 -12.250 -0.472 -2.400 0.287 O JIH 4 JIH CB C3 C 0 1 N N N N N N 10.037 44.031 -9.468 1.137 0.304 -0.544 CB JIH 5 JIH CG C4 C 0 1 Y N N N N N 10.259 42.950 -8.403 2.164 1.326 -0.130 CG JIH 6 JIH CD1 C5 C 0 1 Y N N N N N 9.184 42.163 -7.993 3.467 0.934 0.116 CD1 JIH 7 JIH CD2 C6 C 0 1 Y N N N N N 11.513 42.746 -7.847 1.803 2.655 -0.002 CD2 JIH 8 JIH CE1 C7 C 0 1 Y N N N N N 9.358 41.174 -7.025 4.410 1.869 0.496 CE1 JIH 9 JIH CE2 C8 C 0 1 Y N N N N N 11.699 41.737 -6.888 2.743 3.593 0.378 CE2 JIH 10 JIH CZ C9 C 0 1 Y N N N N N 10.614 40.953 -6.482 4.049 3.202 0.631 CZ JIH 11 JIH OH O2 O 0 1 N N N N N N 10.809 39.977 -5.543 4.976 4.123 1.005 OH JIH 12 JIH CAB C10 C 0 1 N N N N N N 12.638 42.438 -11.306 2.090 -2.063 0.956 CAB JIH 13 JIH CAC C11 C 0 1 N N N N N N 14.125 42.729 -11.553 3.102 -2.824 1.773 CAC JIH 14 JIH CAD C12 C 0 1 Y N N N N N 15.000 41.651 -10.900 3.677 -3.943 0.944 CAD JIH 15 JIH CAE C13 C 0 1 Y N N N N N 15.398 41.846 -9.579 4.805 -3.725 0.175 CAE JIH 16 JIH CAF C14 C 0 1 Y N N N N N 16.198 40.916 -8.933 5.333 -4.751 -0.585 CAF JIH 17 JIH CAG C15 C 0 1 Y N N N N N 16.592 39.767 -9.616 4.733 -5.999 -0.576 CAG JIH 18 JIH CAI C16 C 0 1 Y N N N N N 16.185 39.550 -10.934 3.603 -6.216 0.195 CAI JIH 19 JIH CAJ C17 C 0 1 Y N N N N N 15.387 40.498 -11.585 3.080 -5.190 0.958 CAJ JIH 20 JIH CAO C18 C 0 1 N N N N N N 8.212 44.056 -13.848 -2.924 -1.604 -0.499 CAO JIH 21 JIH CAP C19 C 0 1 Y N N N N N 7.256 43.048 -14.477 -4.142 -0.797 -0.870 CAP JIH 22 JIH CAQ C20 C 0 1 Y N N N N N 7.559 41.701 -14.676 -4.319 -0.374 -2.174 CAQ JIH 23 JIH CAR C21 C 0 1 Y N N N N N 6.597 40.878 -15.264 -5.435 0.367 -2.519 CAR JIH 24 JIH CAS C22 C 0 1 Y N N N N N 5.355 41.363 -15.661 -6.377 0.685 -1.560 CAS JIH 25 JIH CAT C23 C 0 1 Y N N N N N 5.076 42.708 -15.411 -6.202 0.261 -0.249 CAT JIH 26 JIH CAV C24 C 0 1 N N N N N N 2.830 42.859 -16.110 -8.457 0.672 0.390 CAV JIH 27 JIH CAW C25 C 0 1 N N N N N N 1.949 44.007 -16.624 -9.467 1.134 1.409 CAW JIH 28 JIH CAZ C26 C 0 1 Y N N N N N 6.029 43.532 -14.858 -5.083 -0.487 0.092 CAZ JIH 29 JIH FAH F1 F 0 1 N N N N N N 17.342 38.885 -8.966 5.248 -7.003 -1.318 FAH JIH 30 JIH NAN N2 N 0 1 N N N N N N 8.878 43.469 -12.680 -1.845 -0.700 -0.093 NAN JIH 31 JIH NAU N3 N 0 1 N N N N N N 3.991 43.366 -15.755 -7.154 0.583 0.725 NAU JIH 32 JIH OAA O3 O 0 1 N N N N N N 12.183 41.284 -11.368 1.858 -2.397 -0.187 OAA JIH 33 JIH OAY O4 O 0 1 N N N N N N 2.485 41.670 -16.077 -8.816 0.381 -0.731 OAY JIH 34 JIH OBI O5 O 0 1 N N N N N N 10.807 38.888 -3.257 6.637 3.685 -0.984 OBI JIH 35 JIH OBJ O6 O 0 1 N N N N N N 8.697 40.216 -4.207 4.782 5.386 -1.172 OBJ JIH 36 JIH OBK O7 O 0 1 N N N N N N 10.780 41.471 -3.432 6.729 5.961 0.328 OBK JIH 37 JIH PBH P1 P 0 1 N N N N N N 10.267 40.178 -4.023 5.759 4.801 -0.227 PBH JIH 38 JIH H1 H1 H 0 1 N N N N N N 12.331 44.416 -11.056 1.630 -0.741 2.408 H1 JIH 39 JIH H2 H2 H 0 1 N N N N N N 10.122 42.386 -10.868 0.046 0.542 1.298 H2 JIH 40 JIH H3 H3 H 0 1 N N N N N N 10.660 44.909 -9.244 1.625 -0.499 -1.096 H3 JIH 41 JIH H4 H4 H 0 1 N N N N N N 8.978 44.328 -9.484 0.388 0.778 -1.179 H4 JIH 42 JIH H5 H5 H 0 1 N N N N N N 8.208 42.320 -8.428 3.747 -0.103 0.012 H5 JIH 43 JIH H6 H6 H 0 1 N N N N N N 12.346 43.363 -8.151 0.785 2.959 -0.199 H6 JIH 44 JIH H7 H7 H 0 1 N N N N N N 8.516 40.582 -6.699 5.428 1.563 0.689 H7 JIH 45 JIH H8 H8 H 0 1 N N N N N N 12.678 41.567 -6.465 2.461 4.631 0.477 H8 JIH 46 JIH H9 H9 H 0 1 N N N N N N 14.316 42.743 -12.636 3.903 -2.150 2.079 H9 JIH 47 JIH H10 H10 H 0 1 N N N N N N 14.378 43.710 -11.124 2.618 -3.238 2.657 H10 JIH 48 JIH H11 H11 H 0 1 N N N N N N 15.079 42.733 -9.052 5.273 -2.752 0.168 H11 JIH 49 JIH H12 H12 H 0 1 N N N N N N 16.512 41.080 -7.913 6.214 -4.580 -1.186 H12 JIH 50 JIH H13 H13 H 0 1 N N N N N N 16.486 38.651 -11.451 3.134 -7.189 0.203 H13 JIH 51 JIH H14 H14 H 0 1 N N N N N N 15.074 40.339 -12.606 2.198 -5.360 1.559 H14 JIH 52 JIH H15 H15 H 0 1 N N N N N N 8.971 44.348 -14.589 -3.168 -2.272 0.327 H15 JIH 53 JIH H16 H16 H 0 1 N N N N N N 7.646 44.945 -13.534 -2.602 -2.191 -1.358 H16 JIH 54 JIH H17 H17 H 0 1 N N N N N N 8.519 41.303 -14.381 -3.584 -0.621 -2.926 H17 JIH 55 JIH H18 H18 H 0 1 N N N N N N 6.824 39.833 -15.415 -5.570 0.697 -3.538 H18 JIH 56 JIH H19 H19 H 0 1 N N N N N N 4.633 40.722 -16.145 -7.246 1.268 -1.828 H19 JIH 57 JIH H20 H20 H 0 1 N N N N N N 1.698 44.890 -16.018 -9.460 0.454 2.261 H20 JIH 58 JIH H21 H21 H 0 1 N N N N N N 1.843 44.252 -17.691 -9.211 2.139 1.744 H21 JIH 59 JIH H23 H23 H 0 1 N N N N N N 5.808 44.580 -14.721 -4.944 -0.818 1.111 H23 JIH 60 JIH H24 H24 H 0 1 N N N N N N 8.666 42.531 -12.406 -1.989 0.260 -0.096 H24 JIH 61 JIH H25 H25 H 0 1 N N N N N N 4.055 44.364 -15.746 -6.877 0.741 1.640 H25 JIH 62 JIH H26 H26 H 0 1 N N N N N N 10.076 38.328 -3.025 7.300 3.259 -0.424 H26 JIH 63 JIH H27 H27 H 0 1 N N N N N N 10.052 42.063 -3.284 7.234 6.414 -0.361 H27 JIH 64 JIH CL1 CL1 CL 0 0 N Y N N N N ? ? ? -11.108 1.148 0.664 CL1 JIH 65 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal JIH CAW CAV SING N N 1 JIH CAV OAY DOUB N N 2 JIH CAV NAU SING N N 3 JIH NAU CAT SING N N 4 JIH CAS CAT DOUB Y N 5 JIH CAS CAR SING Y N 6 JIH CAT CAZ SING Y N 7 JIH CAR CAQ DOUB Y N 8 JIH CAZ CAP DOUB Y N 9 JIH CAQ CAP SING Y N 10 JIH CAP CAO SING N N 11 JIH CAO NAN SING N N 12 JIH NAN C SING N N 13 JIH O C DOUB N N 14 JIH C CA SING N N 15 JIH CAJ CAI DOUB Y N 16 JIH CAJ CAD SING Y N 17 JIH CAC CAB SING N N 18 JIH CAC CAD SING N N 19 JIH OAA CAB DOUB N N 20 JIH CAB N SING N N 21 JIH N CA SING N N 22 JIH CAI CAG SING Y N 23 JIH CAD CAE DOUB Y N 24 JIH CA CB SING N N 25 JIH CAG FAH SING N N 26 JIH CAG CAF DOUB Y N 27 JIH CAE CAF SING Y N 28 JIH CB CG SING N N 29 JIH CG CD1 DOUB Y N 30 JIH CG CD2 SING Y N 31 JIH CD1 CE1 SING Y N 32 JIH CD2 CE2 DOUB Y N 33 JIH CE1 CZ DOUB Y N 34 JIH CE2 CZ SING Y N 35 JIH CZ OH SING N N 36 JIH OH PBH SING N N 37 JIH OBJ PBH DOUB N N 38 JIH PBH OBK SING N N 39 JIH PBH OBI SING N N 40 JIH N H1 SING N N 41 JIH CA H2 SING N N 42 JIH CB H3 SING N N 43 JIH CB H4 SING N N 44 JIH CD1 H5 SING N N 45 JIH CD2 H6 SING N N 46 JIH CE1 H7 SING N N 47 JIH CE2 H8 SING N N 48 JIH CAC H9 SING N N 49 JIH CAC H10 SING N N 50 JIH CAE H11 SING N N 51 JIH CAF H12 SING N N 52 JIH CAI H13 SING N N 53 JIH CAJ H14 SING N N 54 JIH CAO H15 SING N N 55 JIH CAO H16 SING N N 56 JIH CAQ H17 SING N N 57 JIH CAR H18 SING N N 58 JIH CAS H19 SING N N 59 JIH CAW H20 SING N N 60 JIH CAW H21 SING N N 61 JIH CAZ H23 SING N N 62 JIH NAN H24 SING N N 63 JIH NAU H25 SING N N 64 JIH OBI H26 SING N N 65 JIH OBK H27 SING N N 66 JIH CAW CL1 SING N N 67 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor JIH InChI InChI 1.06 "InChI=1S/C26H26ClFN3O7P/c27-15-25(33)30-21-3-1-2-19(12-21)16-29-26(34)23(31-24(32)14-18-4-8-20(28)9-5-18)13-17-6-10-22(11-7-17)38-39(35,36)37/h1-12,23H,13-16H2,(H,29,34)(H,30,33)(H,31,32)(H2,35,36,37)/t23-/m0/s1" JIH InChIKey InChI 1.06 WSEFGYSEXKXLRO-QHCPKHFHSA-N JIH SMILES_CANONICAL CACTVS 3.385 "O[P](O)(=O)Oc1ccc(C[C@H](NC(=O)Cc2ccc(F)cc2)C(=O)NCc3cccc(NC(=O)CCl)c3)cc1" JIH SMILES CACTVS 3.385 "O[P](O)(=O)Oc1ccc(C[CH](NC(=O)Cc2ccc(F)cc2)C(=O)NCc3cccc(NC(=O)CCl)c3)cc1" JIH SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)NC(=O)CCl)CNC(=O)[C@H](Cc2ccc(cc2)OP(=O)(O)O)NC(=O)Cc3ccc(cc3)F" JIH SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)NC(=O)CCl)CNC(=O)C(Cc2ccc(cc2)OP(=O)(O)O)NC(=O)Cc3ccc(cc3)F" # _pdbx_chem_comp_identifier.comp_id JIH _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[4-[(2~{S})-3-[[3-(2-chloranylethanoylamino)phenyl]methylamino]-2-[2-(4-fluorophenyl)ethanoylamino]-3-oxidanylidene-propyl]phenyl] dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site JIH "Create component" 2022-04-27 PDBE JIH "Modify descriptor" 2022-08-22 RCSB JIH "Initial release" 2023-04-26 RCSB JIH "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id JIH _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom CAW _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #