data_JIY # _chem_comp.id JIY _chem_comp.name "2-{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfanyl}-1,5,6,7-tetrahydroimidazo[4,5-f]indole" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H20 N4 O S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-02-01 _chem_comp.pdbx_modified_date 2022-10-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 340.443 _chem_comp.one_letter_code ? _chem_comp.three_letter_code JIY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5SHU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal JIY C1 C1 C 0 1 Y N N 94.644 -12.602 9.342 3.306 0.741 -0.711 C1 JIY 1 JIY C2 C2 C 0 1 Y N N 93.201 -12.630 9.183 2.929 -0.158 0.300 C2 JIY 2 JIY C3 C3 C 0 1 Y N N 95.490 -13.127 8.341 4.645 0.896 -1.033 C3 JIY 3 JIY N4 N1 N 0 1 Y N N 94.967 -12.009 10.570 2.131 1.311 -1.179 N4 JIY 4 JIY C5 C4 C 0 1 Y N N 92.572 -13.174 8.046 3.909 -0.889 0.972 C5 JIY 5 JIY N6 N2 N 0 1 Y N N 92.674 -12.032 10.334 1.575 -0.103 0.399 N6 JIY 6 JIY C7 C5 C 0 1 Y N N 94.874 -13.660 7.245 5.606 0.168 -0.361 C7 JIY 7 JIY C8 C6 C 0 1 Y N N 93.777 -11.675 11.136 1.104 0.762 -0.465 C8 JIY 8 JIY C9 C7 C 0 1 Y N N 93.439 -13.689 7.089 5.251 -0.727 0.642 C9 JIY 9 JIY C10 C8 C 0 1 N N N 95.507 -14.310 6.050 7.111 0.146 -0.513 C10 JIY 10 JIY S11 S1 S 0 1 N N N 93.551 -10.924 12.649 -0.601 1.155 -0.678 S11 JIY 11 JIY N12 N3 N 0 1 N N N 93.086 -14.306 5.851 6.374 -1.357 1.189 N12 JIY 12 JIY C13 C9 C 0 1 N N N 94.287 -15.047 5.426 7.591 -0.876 0.530 C13 JIY 13 JIY C14 C10 C 0 1 N N N 91.986 -10.027 12.549 -1.332 0.072 0.573 C14 JIY 14 JIY C15 C11 C 0 1 Y N N 91.629 -9.444 13.892 -2.829 0.242 0.573 C15 JIY 15 JIY C16 C12 C 0 1 Y N N 92.233 -8.242 14.338 -3.606 -0.555 -0.242 C16 JIY 16 JIY N17 N4 N 0 1 Y N N 90.699 -10.094 14.654 -3.382 1.149 1.357 N17 JIY 17 JIY C18 C13 C 0 1 Y N N 91.839 -7.742 15.600 -4.988 -0.388 -0.234 C18 JIY 18 JIY C19 C14 C 0 1 N N N 93.236 -7.528 13.513 -2.966 -1.591 -1.130 C19 JIY 19 JIY C20 C15 C 0 1 Y N N 90.364 -9.594 15.873 -4.687 1.336 1.393 C20 JIY 20 JIY C21 C16 C 0 1 Y N N 90.904 -8.399 16.402 -5.532 0.583 0.603 C21 JIY 21 JIY O22 O1 O 0 1 N N N 92.396 -6.577 16.099 -5.786 -1.153 -1.022 O22 JIY 22 JIY C23 C17 C 0 1 N N N 90.508 -7.860 17.719 -7.022 0.804 0.651 C23 JIY 23 JIY C24 C18 C 0 1 N N N 91.728 -5.350 15.730 -6.265 -2.379 -0.466 C24 JIY 24 JIY H1 H1 H 0 1 N N N 96.566 -13.108 8.437 4.937 1.587 -1.809 H1 JIY 25 JIY H2 H2 H 0 1 N N N 95.880 -11.862 10.950 2.053 1.975 -1.882 H2 JIY 26 JIY H3 H3 H 0 1 N N N 91.499 -13.190 7.927 3.625 -1.582 1.750 H3 JIY 27 JIY H5 H5 H 0 1 N N N 95.924 -13.563 5.358 7.387 -0.177 -1.516 H5 JIY 28 JIY H6 H6 H 0 1 N N N 96.296 -15.016 6.346 7.528 1.130 -0.301 H6 JIY 29 JIY H7 H7 H 0 1 N N N 92.316 -14.931 5.979 6.350 -2.016 1.901 H7 JIY 30 JIY H8 H8 H 0 1 N N N 94.364 -15.048 4.329 8.107 -1.702 0.041 H8 JIY 31 JIY H9 H9 H 0 1 N N N 94.242 -16.084 5.791 8.248 -0.395 1.255 H9 JIY 32 JIY H10 H10 H 0 1 N N N 92.080 -9.214 11.814 -1.084 -0.965 0.345 H10 JIY 33 JIY H11 H11 H 0 1 N N N 91.192 -10.718 12.231 -0.937 0.332 1.555 H11 JIY 34 JIY H12 H12 H 0 1 N N N 92.726 -6.806 12.858 -2.891 -2.535 -0.591 H12 JIY 35 JIY H13 H13 H 0 1 N N N 93.938 -6.995 14.170 -3.576 -1.730 -2.023 H13 JIY 36 JIY H14 H14 H 0 1 N N N 93.788 -8.254 12.898 -1.970 -1.257 -1.419 H14 JIY 37 JIY H15 H15 H 0 1 N N N 89.647 -10.139 16.469 -5.100 2.089 2.048 H15 JIY 38 JIY H16 H16 H 0 1 N N N 89.648 -7.186 17.596 -7.460 0.163 1.416 H16 JIY 39 JIY H17 H17 H 0 1 N N N 90.231 -8.689 18.386 -7.227 1.847 0.890 H17 JIY 40 JIY H18 H18 H 0 1 N N N 91.350 -7.304 18.156 -7.456 0.561 -0.319 H18 JIY 41 JIY H19 H19 H 0 1 N N N 92.255 -4.496 16.180 -5.419 -3.013 -0.202 H19 JIY 42 JIY H20 H20 H 0 1 N N N 91.730 -5.246 14.635 -6.853 -2.167 0.428 H20 JIY 43 JIY H21 H21 H 0 1 N N N 90.690 -5.374 16.094 -6.890 -2.891 -1.198 H21 JIY 44 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal JIY C1 C2 DOUB Y N 1 JIY C1 C3 SING Y N 2 JIY C1 N4 SING Y N 3 JIY C2 C5 SING Y N 4 JIY C2 N6 SING Y N 5 JIY C3 C7 DOUB Y N 6 JIY N4 C8 SING Y N 7 JIY C5 C9 DOUB Y N 8 JIY N6 C8 DOUB Y N 9 JIY C7 C9 SING Y N 10 JIY C7 C10 SING N N 11 JIY C8 S11 SING N N 12 JIY C9 N12 SING N N 13 JIY C10 C13 SING N N 14 JIY S11 C14 SING N N 15 JIY N12 C13 SING N N 16 JIY C14 C15 SING N N 17 JIY C15 C16 DOUB Y N 18 JIY C15 N17 SING Y N 19 JIY C16 C18 SING Y N 20 JIY C16 C19 SING N N 21 JIY N17 C20 DOUB Y N 22 JIY C18 C21 DOUB Y N 23 JIY C18 O22 SING N N 24 JIY C20 C21 SING Y N 25 JIY C21 C23 SING N N 26 JIY O22 C24 SING N N 27 JIY C3 H1 SING N N 28 JIY N4 H2 SING N N 29 JIY C5 H3 SING N N 30 JIY C10 H5 SING N N 31 JIY C10 H6 SING N N 32 JIY N12 H7 SING N N 33 JIY C13 H8 SING N N 34 JIY C13 H9 SING N N 35 JIY C14 H10 SING N N 36 JIY C14 H11 SING N N 37 JIY C19 H12 SING N N 38 JIY C19 H13 SING N N 39 JIY C19 H14 SING N N 40 JIY C20 H15 SING N N 41 JIY C23 H16 SING N N 42 JIY C23 H17 SING N N 43 JIY C23 H18 SING N N 44 JIY C24 H19 SING N N 45 JIY C24 H20 SING N N 46 JIY C24 H21 SING N N 47 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor JIY SMILES ACDLabs 12.01 "Cc1c(OC)c(C)cnc1CSc1nc2cc3NCCc3cc2[NH]1" JIY InChI InChI 1.03 "InChI=1S/C18H20N4OS/c1-10-8-20-16(11(2)17(10)23-3)9-24-18-21-14-6-12-4-5-19-13(12)7-15(14)22-18/h6-8,19H,4-5,9H2,1-3H3,(H,21,22)" JIY InChIKey InChI 1.03 WJZVXHZGDYMISX-UHFFFAOYSA-N JIY SMILES_CANONICAL CACTVS 3.385 "COc1c(C)cnc(CSc2[nH]c3cc4CCNc4cc3n2)c1C" JIY SMILES CACTVS 3.385 "COc1c(C)cnc(CSc2[nH]c3cc4CCNc4cc3n2)c1C" JIY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cnc(c(c1OC)C)CSc2[nH]c3cc4c(cc3n2)NCC4" JIY SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cnc(c(c1OC)C)CSc2[nH]c3cc4c(cc3n2)NCC4" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier JIY "SYSTEMATIC NAME" ACDLabs 12.01 "2-{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfanyl}-1,5,6,7-tetrahydroimidazo[4,5-f]indole" JIY "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[(4-methoxy-3,5-dimethyl-pyridin-2-yl)methylsulfanyl]-1,5,6,7-tetrahydropyrrolo[2,3-f]benzimidazole" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site JIY "Create component" 2022-02-01 RCSB JIY "Initial release" 2022-10-12 RCSB #