data_JJI # _chem_comp.id JJI _chem_comp.name "(4S,11S,18S)-4-[[(2,4-dinitrophenyl)disulfanyl]methyl]-11,18-dimethyl-6,13,20-trithia-3,10,17,22,23,24-hexazatetracyclo[17.2.1.1^{5,8}.1^{12,15}]tetracosa-1(21),5(24),7,12(23),14,19(22)-hexaene-2,9,16-trione" _chem_comp.type peptide-like _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H20 N8 O7 S5" _chem_comp.mon_nstd_parent_comp_id JIZ _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-04-28 _chem_comp.pdbx_modified_date 2023-04-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 692.790 _chem_comp.one_letter_code ? _chem_comp.three_letter_code JJI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7ZK6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal JJI C01 C1 C 0 1 N N S 118.831 121.748 138.450 -0.704 -0.846 0.407 C01 JJI 1 JJI C02 C2 C 0 1 Y N N 118.057 120.695 137.667 0.117 -2.099 0.228 C02 JJI 2 JJI C03 C3 C 0 1 Y N N 117.308 118.572 137.082 1.953 -3.315 -0.058 C03 JJI 3 JJI C04 C4 C 0 1 Y N N 116.616 119.283 136.103 1.064 -4.332 -0.032 C04 JJI 4 JJI C05 C5 C 0 1 N N N 117.205 117.047 137.232 3.406 -3.499 -0.228 C05 JJI 5 JJI C06 C6 C 0 1 N N S 116.293 115.330 138.979 5.645 -2.590 -0.389 C06 JJI 6 JJI C07 C7 C 0 1 Y N N 116.758 115.283 140.399 6.333 -1.260 -0.208 C07 JJI 7 JJI C08 C8 C 0 1 Y N N 117.871 115.773 142.345 6.499 0.937 0.076 C08 JJI 8 JJI C09 C9 C 0 1 Y N N 117.050 114.776 142.848 7.819 0.656 0.063 C09 JJI 9 JJI C10 C10 C 0 1 N N N 118.924 116.422 143.233 5.950 2.296 0.241 C10 JJI 10 JJI C11 C11 C 0 1 N N S 117.461 118.083 144.257 4.056 3.799 0.404 C11 JJI 11 JJI C12 C12 C 0 1 Y N N 117.772 119.356 143.593 2.551 3.707 0.430 C12 JJI 12 JJI C13 C13 C 0 1 Y N N 118.168 120.975 142.098 0.563 2.716 0.449 C13 JJI 13 JJI C14 C14 C 0 1 Y N N 118.384 121.744 143.225 0.129 3.994 0.474 C14 JJI 14 JJI C15 C15 C 0 1 N N N 118.217 121.522 140.706 -0.337 1.548 0.446 C15 JJI 15 JJI C16 C16 C 0 1 N N N 116.517 114.085 138.158 5.941 -3.138 -1.786 C16 JJI 16 JJI C17 C17 C 0 1 N N N 117.311 118.630 145.654 4.501 4.682 -0.764 C17 JJI 17 JJI C18 C18 C 0 1 N N N 120.159 122.085 137.779 -1.687 -0.700 -0.756 C18 JJI 18 JJI N01 N1 N 0 1 N N N 119.078 121.065 139.685 0.225 0.306 0.425 N01 JJI 19 JJI N02 N2 N 0 1 Y N N 118.055 119.375 137.903 1.396 -2.109 0.087 N02 JJI 20 JJI N03 N3 N 0 1 N N N 116.596 116.628 138.459 4.190 -2.382 -0.232 N03 JJI 21 JJI N04 N4 N 0 1 Y N N 117.681 116.022 141.006 5.718 -0.137 -0.076 N04 JJI 22 JJI N05 N5 N 0 1 N N N 118.722 117.490 144.151 4.592 2.433 0.230 N05 JJI 23 JJI N06 N6 N 0 1 Y N N 117.847 119.684 142.324 1.894 2.600 0.426 N06 JJI 24 JJI O01 O1 O 0 1 N N N 117.588 116.288 136.420 3.890 -4.607 -0.360 O01 JJI 25 JJI O02 O2 O 0 1 N N N 120.011 115.993 143.204 6.680 3.259 0.383 O02 JJI 26 JJI O03 O3 O 0 1 N N N 117.459 122.354 140.407 -1.545 1.688 0.462 O03 JJI 27 JJI S01 S1 S 0 1 Y N N 117.047 120.900 136.365 -0.505 -3.687 0.184 S01 JJI 28 JJI S02 S2 S 0 1 Y N N 116.103 114.281 141.535 8.023 -1.029 -0.150 S02 JJI 29 JJI S03 S3 S 0 1 Y N N 118.141 120.666 144.501 1.484 5.038 0.467 S03 JJI 30 JJI S04 S4 S 0 1 N N N 120.101 121.597 136.028 -2.803 -2.130 -0.788 S04 JJI 31 JJI S S5 S 0 1 N N N 120.215 119.815 135.465 -4.087 -1.748 0.764 S JJI 32 JJI C1 C19 C 0 1 Y N N 120.091 119.486 133.699 -5.301 -0.706 0.026 C1 JJI 33 JJI C2 C20 C 0 1 Y N N 120.435 120.415 132.722 -6.415 -0.310 0.756 C2 JJI 34 JJI N2 N7 N 1 1 N N N 120.940 121.750 132.999 -6.584 -0.762 2.155 N2 JJI 35 JJI O21 O4 O 0 1 N N N 120.053 122.836 133.064 -7.608 -0.501 2.761 O21 JJI 36 JJI O22 O5 O -1 1 N N N 122.316 121.982 133.163 -5.698 -1.396 2.701 O22 JJI 37 JJI C3 C21 C 0 1 Y N N 120.303 120.066 131.399 -7.365 0.506 0.174 C3 JJI 38 JJI C4 C22 C 0 1 Y N N 119.824 118.822 131.066 -7.209 0.929 -1.133 C4 JJI 39 JJI N4 N8 N 1 1 N N N 119.697 118.476 129.679 -8.230 1.803 -1.754 N4 JJI 40 JJI O41 O6 O 0 1 N N N 120.193 117.232 129.258 -9.206 2.149 -1.113 O41 JJI 41 JJI O42 O7 O -1 1 N N N 119.094 119.383 128.789 -8.094 2.176 -2.905 O42 JJI 42 JJI C5 C23 C 0 1 Y N N 119.478 117.900 132.034 -6.101 0.537 -1.863 C5 JJI 43 JJI C6 C24 C 0 1 Y N N 119.612 118.241 133.361 -5.144 -0.274 -1.286 C6 JJI 44 JJI H5 H1 H 0 1 N N N 118.224 122.655 138.591 -1.251 -0.894 1.349 H5 JJI 45 JJI H19 H4 H 0 1 N N N 115.953 118.890 135.346 1.305 -5.379 -0.133 H19 JJI 46 JJI H6 H6 H 0 1 N N N 115.198 115.351 139.085 5.999 -3.293 0.365 H6 JJI 47 JJI H7 H7 H 0 1 N N N 117.021 114.397 143.859 8.616 1.377 0.170 H7 JJI 48 JJI H8 H8 H 0 1 N N N 116.596 117.526 143.867 4.416 4.221 1.343 H8 JJI 49 JJI H9 H9 H 0 1 N N N 118.647 122.790 143.277 -0.905 4.307 0.495 H9 JJI 50 JJI H10 H10 H 0 1 N N N 116.135 114.244 137.139 7.016 -3.269 -1.905 H10 JJI 51 JJI H11 H11 H 0 1 N N N 117.593 113.863 138.115 5.442 -4.099 -1.913 H11 JJI 52 JJI H12 H12 H 0 1 N N N 115.986 113.240 138.621 5.575 -2.438 -2.537 H12 JJI 53 JJI H1 H13 H 0 1 N N N 117.066 117.810 146.345 4.080 5.681 -0.645 H1 JJI 54 JJI H2 H14 H 0 1 N N N 118.254 119.103 145.966 5.589 4.746 -0.778 H2 JJI 55 JJI H3 H15 H 0 1 N N N 116.503 119.377 145.671 4.150 4.249 -1.701 H3 JJI 56 JJI H13 H16 H 0 1 N N N 120.341 123.167 137.851 -2.270 0.212 -0.628 H13 JJI 57 JJI H14 H17 H 0 1 N N N 120.972 121.542 138.283 -1.135 -0.650 -1.694 H14 JJI 58 JJI H15 H18 H 0 1 N N N 119.772 120.355 139.808 1.187 0.183 0.422 H15 JJI 59 JJI H16 H19 H 0 1 N N N 116.335 117.381 139.063 3.811 -1.494 -0.137 H16 JJI 60 JJI H17 H20 H 0 1 N N N 119.479 117.815 144.718 4.006 1.669 0.113 H17 JJI 61 JJI H21 H21 H 0 1 N N N 120.575 120.767 130.624 -8.232 0.814 0.740 H21 JJI 62 JJI H22 H22 H 0 1 N N N 119.107 116.925 131.754 -5.982 0.869 -2.883 H22 JJI 63 JJI H23 H23 H 0 1 N N N 119.343 117.535 134.133 -4.277 -0.576 -1.855 H23 JJI 64 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal JJI C01 C02 SING N N 1 JJI C01 C18 SING N N 2 JJI C01 N01 SING N N 3 JJI C02 N02 DOUB Y N 4 JJI C02 S01 SING Y N 5 JJI C03 C04 DOUB Y N 6 JJI C03 C05 SING N N 7 JJI C03 N02 SING Y N 8 JJI C04 S01 SING Y N 9 JJI C05 N03 SING N N 10 JJI C05 O01 DOUB N N 11 JJI C06 C07 SING N N 12 JJI C06 C16 SING N N 13 JJI C06 N03 SING N N 14 JJI C07 N04 DOUB Y N 15 JJI C07 S02 SING Y N 16 JJI C08 C09 DOUB Y N 17 JJI C08 C10 SING N N 18 JJI C08 N04 SING Y N 19 JJI C09 S02 SING Y N 20 JJI C10 N05 SING N N 21 JJI C10 O02 DOUB N N 22 JJI C11 C12 SING N N 23 JJI C11 C17 SING N N 24 JJI C11 N05 SING N N 25 JJI C12 N06 DOUB Y N 26 JJI C12 S03 SING Y N 27 JJI C13 C14 DOUB Y N 28 JJI C13 C15 SING N N 29 JJI C13 N06 SING Y N 30 JJI C14 S03 SING Y N 31 JJI C15 N01 SING N N 32 JJI C15 O03 DOUB N N 33 JJI C18 S04 SING N N 34 JJI S04 S SING N N 35 JJI S C1 SING N N 36 JJI C1 C2 DOUB Y N 37 JJI C1 C6 SING Y N 38 JJI C2 N2 SING N N 39 JJI C2 C3 SING Y N 40 JJI N2 O21 DOUB N N 41 JJI N2 O22 SING N N 42 JJI C3 C4 DOUB Y N 43 JJI C4 N4 SING N N 44 JJI C4 C5 SING Y N 45 JJI N4 O41 DOUB N N 46 JJI N4 O42 SING N N 47 JJI C5 C6 DOUB Y N 48 JJI C01 H5 SING N N 49 JJI C04 H19 SING N N 50 JJI C06 H6 SING N N 51 JJI C09 H7 SING N N 52 JJI C11 H8 SING N N 53 JJI C14 H9 SING N N 54 JJI C16 H10 SING N N 55 JJI C16 H11 SING N N 56 JJI C16 H12 SING N N 57 JJI C17 H1 SING N N 58 JJI C17 H2 SING N N 59 JJI C17 H3 SING N N 60 JJI C18 H13 SING N N 61 JJI C18 H14 SING N N 62 JJI N01 H15 SING N N 63 JJI N03 H16 SING N N 64 JJI N05 H17 SING N N 65 JJI C3 H21 SING N N 66 JJI C5 H22 SING N N 67 JJI C6 H23 SING N N 68 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor JJI InChI InChI 1.06 "InChI=1S/C24H20N8O7S5/c1-10-22-28-13(6-40-22)19(33)25-11(2)23-29-15(7-41-23)21(35)27-16(24-30-14(8-42-24)20(34)26-10)9-43-44-18-4-3-12(31(36)37)5-17(18)32(38)39/h3-8,10-11,16H,9H2,1-2H3,(H,25,33)(H,26,34)(H,27,35)/t10-,11-,16-/m0/s1" JJI InChIKey InChI 1.06 MMEXOHZELNPTHF-MMPTUQATSA-N JJI SMILES_CANONICAL CACTVS 3.385 "C[C@@H]1NC(=O)c2csc(n2)[C@H](CSSc3ccc(cc3[N+]([O-])=O)[N+]([O-])=O)NC(=O)c4csc(n4)[C@H](C)NC(=O)c5csc1n5" JJI SMILES CACTVS 3.385 "C[CH]1NC(=O)c2csc(n2)[CH](CSSc3ccc(cc3[N+]([O-])=O)[N+]([O-])=O)NC(=O)c4csc(n4)[CH](C)NC(=O)c5csc1n5" JJI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]1c2nc(cs2)C(=O)N[C@H](c3nc(cs3)C(=O)N[C@H](c4nc(cs4)C(=O)N1)CSSc5ccc(cc5[N+](=O)[O-])[N+](=O)[O-])C" JJI SMILES "OpenEye OEToolkits" 2.0.7 "CC1c2nc(cs2)C(=O)NC(c3nc(cs3)C(=O)NC(c4nc(cs4)C(=O)N1)CSSc5ccc(cc5[N+](=O)[O-])[N+](=O)[O-])C" # _pdbx_chem_comp_identifier.comp_id JJI _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 3.1.0.0 _pdbx_chem_comp_identifier.identifier "(4~{S},11~{S},18~{S})-4-[[(2,4-dinitrophenyl)disulfanyl]methyl]-11,18-dimethyl-6,13,20-trithia-3,10,17,22,23,24-hexazatetracyclo[17.2.1.1^{5,8}.1^{12,15}]tetracosa-1(21),5(24),7,12(23),14,19(22)-hexaene-2,9,16-trione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site JJI "Create component" 2022-04-28 PDBE JJI "Modify descriptor" 2022-08-22 RCSB JJI "Initial release" 2023-04-26 RCSB #