data_JKD # _chem_comp.id JKD _chem_comp.name "(4R)-7-methyl-2,5-bis{2-[1-methyl-5-(pyrrolidin-1-yl)-1H-1,2,4-triazol-3-yl]ethyl}[1,2,4]triazolo[1,5-c]pyrimidine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H34 N12" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-02-01 _chem_comp.pdbx_modified_date 2022-10-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 490.607 _chem_comp.one_letter_code ? _chem_comp.three_letter_code JKD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5SI0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal JKD C02 C1 C 0 1 Y N N -53.708 73.601 -14.597 1.588 4.634 -0.551 C02 JKD 1 JKD C04 C2 C 0 1 Y N N -54.343 74.837 -12.594 1.864 2.422 0.049 C04 JKD 2 JKD C06 C3 C 0 1 Y N N -52.980 75.966 -14.339 -0.324 3.271 -0.166 C06 JKD 3 JKD N09 N1 N 0 1 Y N N -53.455 77.282 -12.628 -0.292 1.138 0.427 N09 JKD 4 JKD C10 C4 C 0 1 N N N -52.319 79.428 -13.254 -2.751 0.681 0.555 C10 JKD 5 JKD C11 C5 C 0 1 N N N -52.946 79.835 -11.899 -3.177 0.017 -0.756 C11 JKD 6 JKD C18 C6 C 0 1 N N N -51.374 85.354 -11.946 -8.334 -0.035 -0.686 C18 JKD 7 JKD C19 C7 C 0 1 N N N -51.161 86.521 -11.021 -9.624 0.210 0.118 C19 JKD 8 JKD C20 C8 C 0 1 N N N -52.475 86.769 -10.352 -9.818 -1.066 0.969 C20 JKD 9 JKD C21 C9 C 0 1 N N N -53.468 85.975 -11.164 -8.390 -1.664 1.026 C21 JKD 10 JKD C22 C10 C 0 1 N N N -53.745 72.336 -15.381 2.217 5.955 -0.911 C22 JKD 11 JKD C23 C11 C 0 1 N N N -55.060 74.920 -11.233 2.792 1.275 0.359 C23 JKD 12 JKD C24 C12 C 0 1 N N N -56.478 75.360 -11.533 4.242 1.740 0.216 C24 JKD 13 JKD C25 C13 C 0 1 Y N N -57.320 75.547 -10.292 5.170 0.593 0.525 C25 JKD 14 JKD C27 C14 C 0 1 Y N N -58.307 75.167 -8.412 6.419 -1.154 0.241 C27 JKD 15 JKD N01 N2 N 0 1 Y N N -54.371 73.654 -13.348 2.365 3.584 -0.273 N01 JKD 16 JKD C03 C15 C 0 1 Y N N -52.999 74.743 -15.135 0.232 4.519 -0.506 C03 JKD 17 JKD N05 N3 N 0 1 Y N N -53.625 76.006 -13.147 0.524 2.232 0.115 N05 JKD 18 JKD N07 N4 N 0 1 Y N N -52.405 77.218 -14.570 -1.562 2.820 -0.032 N07 JKD 19 JKD C08 C16 C 0 1 Y N N -52.705 78.010 -13.495 -1.536 1.539 0.311 C08 JKD 20 JKD C12 C17 C 0 1 Y N N -53.392 81.298 -11.930 -4.391 -0.841 -0.513 C12 JKD 21 JKD N13 N5 N 0 1 Y N N -52.549 82.379 -11.808 -5.658 -0.434 -0.608 N13 JKD 22 JKD C14 C18 C 0 1 Y N N -53.304 83.518 -11.882 -6.467 -1.434 -0.332 C14 JKD 23 JKD N15 N6 N 0 1 Y N N -54.608 83.129 -12.050 -5.709 -2.514 -0.050 N15 JKD 24 JKD N16 N7 N 0 1 Y N N -54.665 81.752 -12.078 -4.372 -2.104 -0.180 N16 JKD 25 JKD N17 N8 N 0 1 N N N -52.751 84.903 -11.794 -7.850 -1.386 -0.329 N17 JKD 26 JKD N26 N9 N 0 1 Y N N -57.521 74.603 -9.332 5.636 -0.286 -0.363 N26 JKD 27 JKD N28 N10 N 0 1 Y N N -58.629 76.437 -8.774 6.464 -0.829 1.551 N28 JKD 28 JKD N29 N11 N 0 1 Y N N -58.001 76.681 -9.960 5.650 0.305 1.705 N29 JKD 29 JKD N30 N12 N 0 1 N N N -58.859 74.427 -7.209 7.078 -2.212 -0.359 N30 JKD 30 JKD C31 C19 C 0 1 N N N -59.185 75.170 -6.011 6.794 -2.259 -1.810 C31 JKD 31 JKD C32 C20 C 0 1 N N N -59.628 74.027 -5.136 6.767 -3.744 -2.217 C32 JKD 32 JKD C33 C21 C 0 1 N N N -58.936 72.778 -5.628 7.020 -4.526 -0.908 C33 JKD 33 JKD C34 C22 C 0 1 N N N -58.065 73.265 -6.766 6.609 -3.510 0.188 C34 JKD 34 JKD C35 C23 C 0 1 N N N -59.477 77.369 -8.029 7.213 -1.522 2.602 C35 JKD 35 JKD C36 C24 C 0 1 N N N -55.754 83.992 -12.177 -6.186 -3.851 0.314 C36 JKD 36 JKD H1 H1 H 0 1 N N N -51.224 79.520 -13.208 -3.565 1.302 0.929 H1 JKD 37 JKD H2 H2 H 0 1 N N N -52.707 80.069 -14.059 -2.511 -0.087 1.290 H2 JKD 38 JKD H3 H3 H 0 1 N N N -53.818 79.195 -11.697 -3.416 0.785 -1.492 H3 JKD 39 JKD H4 H4 H 0 1 N N N -52.201 79.701 -11.101 -2.363 -0.604 -1.130 H4 JKD 40 JKD H5 H5 H 0 1 N N N -50.683 84.539 -11.684 -8.547 0.013 -1.754 H5 JKD 41 JKD H6 H6 H 0 1 N N N -51.196 85.665 -12.986 -7.585 0.713 -0.424 H6 JKD 42 JKD H7 H7 H 0 1 N N N -50.392 86.279 -10.273 -9.508 1.081 0.763 H7 JKD 43 JKD H8 H8 H 0 1 N N N -50.850 87.408 -11.592 -10.470 0.348 -0.556 H8 JKD 44 JKD H9 H9 H 0 1 N N N -52.454 86.416 -9.310 -10.171 -0.813 1.969 H9 JKD 45 JKD H10 H10 H 0 1 N N N -52.725 87.840 -10.371 -10.505 -1.755 0.479 H10 JKD 46 JKD H11 H11 H 0 1 N N N -53.929 86.619 -11.928 -7.793 -1.163 1.788 H11 JKD 47 JKD H12 H12 H 0 1 N N N -54.251 85.568 -10.507 -8.429 -2.737 1.214 H12 JKD 48 JKD H13 H13 H 0 1 N N N -54.324 71.580 -14.831 2.378 6.540 -0.006 H13 JKD 49 JKD H14 H14 H 0 1 N N N -54.219 72.523 -16.356 3.172 5.780 -1.407 H14 JKD 50 JKD H15 H15 H 0 1 N N N -52.719 71.971 -15.536 1.554 6.502 -1.583 H15 JKD 51 JKD H16 H16 H 0 1 N N N -55.061 73.936 -10.741 2.619 0.933 1.379 H16 JKD 52 JKD H17 H17 H 0 1 N N N -54.562 75.654 -10.583 2.602 0.457 -0.336 H17 JKD 53 JKD H18 H18 H 0 1 N N N -56.440 76.316 -12.076 4.416 2.082 -0.804 H18 JKD 54 JKD H19 H19 H 0 1 N N N -56.954 74.597 -12.166 4.432 2.558 0.911 H19 JKD 55 JKD H20 H20 H 0 1 N N N -52.501 74.692 -16.092 -0.401 5.365 -0.726 H20 JKD 56 JKD H21 H21 H 0 1 N N N -58.308 75.690 -5.597 5.826 -1.800 -2.014 H21 JKD 57 JKD H22 H22 H 0 1 N N N -59.994 75.895 -6.183 7.578 -1.737 -2.359 H22 JKD 58 JKD H23 H23 H 0 1 N N N -59.347 74.224 -4.091 5.793 -4.005 -2.631 H23 JKD 59 JKD H24 H24 H 0 1 N N N -60.719 73.903 -5.205 7.555 -3.952 -2.941 H24 JKD 60 JKD H25 H25 H 0 1 N N N -58.324 72.331 -4.831 6.393 -5.417 -0.863 H25 JKD 61 JKD H26 H26 H 0 1 N N N -59.669 72.040 -5.985 8.073 -4.789 -0.813 H26 JKD 62 JKD H27 H27 H 0 1 N N N -57.968 72.509 -7.559 7.110 -3.736 1.129 H27 JKD 63 JKD H28 H28 H 0 1 N N N -57.065 73.562 -6.418 5.527 -3.504 0.319 H28 JKD 64 JKD H29 H29 H 0 1 N N N -59.541 78.323 -8.573 8.210 -1.089 2.684 H29 JKD 65 JKD H30 H30 H 0 1 N N N -60.485 76.941 -7.920 6.690 -1.414 3.552 H30 JKD 66 JKD H31 H31 H 0 1 N N N -59.043 77.543 -7.033 7.297 -2.580 2.351 H31 JKD 67 JKD H32 H32 H 0 1 N N N -56.661 83.382 -12.297 -6.315 -4.449 -0.588 H32 JKD 68 JKD H33 H33 H 0 1 N N N -55.847 84.613 -11.274 -5.457 -4.331 0.967 H33 JKD 69 JKD H34 H34 H 0 1 N N N -55.629 84.640 -13.057 -7.140 -3.767 0.834 H34 JKD 70 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal JKD N01 C02 SING Y N 1 JKD C02 C03 DOUB Y N 2 JKD N01 C04 DOUB Y N 3 JKD C04 N05 SING Y N 4 JKD C03 C06 SING Y N 5 JKD N05 C06 SING Y N 6 JKD C06 N07 DOUB Y N 7 JKD N07 C08 SING Y N 8 JKD N05 N09 SING Y N 9 JKD C08 N09 DOUB Y N 10 JKD C08 C10 SING N N 11 JKD C10 C11 SING N N 12 JKD C11 C12 SING N N 13 JKD C12 N13 SING Y N 14 JKD N13 C14 DOUB Y N 15 JKD C14 N15 SING Y N 16 JKD C12 N16 DOUB Y N 17 JKD N15 N16 SING Y N 18 JKD C14 N17 SING N N 19 JKD N17 C18 SING N N 20 JKD C18 C19 SING N N 21 JKD C19 C20 SING N N 22 JKD N17 C21 SING N N 23 JKD C20 C21 SING N N 24 JKD C02 C22 SING N N 25 JKD C04 C23 SING N N 26 JKD C23 C24 SING N N 27 JKD C24 C25 SING N N 28 JKD C25 N26 SING Y N 29 JKD N26 C27 DOUB Y N 30 JKD C27 N28 SING Y N 31 JKD C25 N29 DOUB Y N 32 JKD N28 N29 SING Y N 33 JKD C27 N30 SING N N 34 JKD N30 C31 SING N N 35 JKD C31 C32 SING N N 36 JKD C32 C33 SING N N 37 JKD N30 C34 SING N N 38 JKD C33 C34 SING N N 39 JKD N28 C35 SING N N 40 JKD N15 C36 SING N N 41 JKD C10 H1 SING N N 42 JKD C10 H2 SING N N 43 JKD C11 H3 SING N N 44 JKD C11 H4 SING N N 45 JKD C18 H5 SING N N 46 JKD C18 H6 SING N N 47 JKD C19 H7 SING N N 48 JKD C19 H8 SING N N 49 JKD C20 H9 SING N N 50 JKD C20 H10 SING N N 51 JKD C21 H11 SING N N 52 JKD C21 H12 SING N N 53 JKD C22 H13 SING N N 54 JKD C22 H14 SING N N 55 JKD C22 H15 SING N N 56 JKD C23 H16 SING N N 57 JKD C23 H17 SING N N 58 JKD C24 H18 SING N N 59 JKD C24 H19 SING N N 60 JKD C03 H20 SING N N 61 JKD C31 H21 SING N N 62 JKD C31 H22 SING N N 63 JKD C32 H23 SING N N 64 JKD C32 H24 SING N N 65 JKD C33 H25 SING N N 66 JKD C33 H26 SING N N 67 JKD C34 H27 SING N N 68 JKD C34 H28 SING N N 69 JKD C35 H29 SING N N 70 JKD C35 H30 SING N N 71 JKD C35 H31 SING N N 72 JKD C36 H32 SING N N 73 JKD C36 H33 SING N N 74 JKD C36 H34 SING N N 75 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor JKD SMILES ACDLabs 12.01 "Cn1nc(CCc2nc3cc(C)nc(CCc4nc(N5CCCC5)n(C)n4)n3n2)nc1N1CCCC1" JKD InChI InChI 1.03 "InChI=1S/C24H34N12/c1-17-16-22-26-18(8-9-19-27-23(32(2)29-19)34-12-4-5-13-34)31-36(22)21(25-17)11-10-20-28-24(33(3)30-20)35-14-6-7-15-35/h16H,4-15H2,1-3H3" JKD InChIKey InChI 1.03 FIEXXJRFFPIQCD-UHFFFAOYSA-N JKD SMILES_CANONICAL CACTVS 3.385 "Cn1nc(CCc2nn3c(CCc4nn(C)c(n4)N5CCCC5)nc(C)cc3n2)nc1N6CCCC6" JKD SMILES CACTVS 3.385 "Cn1nc(CCc2nn3c(CCc4nn(C)c(n4)N5CCCC5)nc(C)cc3n2)nc1N6CCCC6" JKD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc2nc(nn2c(n1)CCc3nc(n(n3)C)N4CCCC4)CCc5nc(n(n5)C)N6CCCC6" JKD SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cc2nc(nn2c(n1)CCc3nc(n(n3)C)N4CCCC4)CCc5nc(n(n5)C)N6CCCC6" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier JKD "SYSTEMATIC NAME" ACDLabs 12.01 "(4R)-7-methyl-2,5-bis{2-[1-methyl-5-(pyrrolidin-1-yl)-1H-1,2,4-triazol-3-yl]ethyl}[1,2,4]triazolo[1,5-c]pyrimidine" JKD "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "7-methyl-2,5-bis[2-(1-methyl-5-pyrrolidin-1-yl-1,2,4-triazol-3-yl)ethyl]-[1,2,4]triazolo[1,5-c]pyrimidine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site JKD "Create component" 2022-02-01 RCSB JKD "Initial release" 2022-10-12 RCSB #