data_JL8
#
_chem_comp.id JL8
_chem_comp.name "(2~{R})-2-[5-(3-chloranyl-2-methyl-4-oxidanyl-phenyl)-6-ethyl-thieno[2,3-d]pyrimidin-4-yl]oxy-3-phenyl-propanoic acid"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C24 H21 Cl N2 O4 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2019-03-09
_chem_comp.pdbx_modified_date 2019-08-02
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 468.953
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code JL8
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6QYN
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
# #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
JL8 C6 C1 C 0 1 Y N N 11.032 56.305 -3.140 3.243 -0.807 0.570 C6 JL8 1
JL8 C8 C2 C 0 1 Y N N 13.109 55.957 -4.019 1.841 1.057 0.328 C8 JL8 2
JL8 C10 C3 C 0 1 N N N 9.636 56.897 -3.004 3.706 -2.239 0.478 C10 JL8 3
JL8 C13 C4 C 0 1 N N N 15.406 57.641 -7.849 -2.752 1.438 -0.887 C13 JL8 4
JL8 C17 C5 C 0 1 Y N N 15.314 59.090 -7.497 -3.015 0.966 0.520 C17 JL8 5
JL8 C21 C6 C 0 1 Y N N 14.852 60.814 -5.888 -3.964 1.334 2.687 C21 JL8 6
JL8 C24 C7 C 0 1 Y N N 11.611 57.625 -5.153 1.066 -1.258 -0.509 C24 JL8 7
JL8 C28 C8 C 0 1 Y N N 11.186 59.897 -5.787 -0.822 -2.731 -0.327 C28 JL8 8
JL8 C2 C9 C 0 1 Y N N 15.248 54.431 -3.462 1.813 3.697 0.871 C2 JL8 9
JL8 C9 C10 C 0 1 Y N N 13.103 55.097 -2.930 2.926 1.677 0.952 C9 JL8 10
JL8 C18 C11 C 0 1 Y N N 14.939 59.472 -6.208 -3.723 1.766 1.396 C18 JL8 11
JL8 C23 C12 C 0 1 Y N N 15.587 60.046 -8.460 -2.553 -0.270 0.932 C23 JL8 12
JL8 C27 C13 C 0 1 Y N N 11.103 58.151 -7.441 0.158 -2.287 -2.480 C27 JL8 13
JL8 C29 C14 C 0 1 Y N N 11.415 57.216 -6.463 1.087 -1.455 -1.889 C29 JL8 14
JL8 C30 C15 C 0 1 N N N 11.700 59.406 -3.360 0.084 -1.700 1.763 C30 JL8 15
JL8 C25 C16 C 0 1 Y N N 11.498 58.962 -4.814 0.106 -1.904 0.270 C25 JL8 16
JL8 CL CL1 CL 0 0 N N N 11.033 61.556 -5.362 -2.017 -3.536 0.641 CL JL8 17
JL8 C26 C17 C 0 1 Y N N 10.993 59.491 -7.106 -0.802 -2.920 -1.704 C26 JL8 18
JL8 O31 O1 O 0 1 N N N 10.704 60.395 -8.055 -1.715 -3.740 -2.289 O31 JL8 19
JL8 C7 C18 C 0 1 Y N N 11.907 56.651 -4.129 2.066 -0.369 0.130 C7 JL8 20
JL8 C22 C19 C 0 1 N N N 8.716 55.956 -2.225 4.452 -2.450 -0.841 C22 JL8 21
JL8 S5 S1 S 0 1 Y N N 11.692 55.160 -2.093 4.184 0.493 1.276 S5 JL8 22
JL8 N3 N1 N 0 1 Y N N 14.157 54.351 -2.680 2.869 2.991 1.202 N3 JL8 23
JL8 N1 N2 N 0 1 Y N N 15.283 55.269 -4.526 0.764 3.156 0.277 N1 JL8 24
JL8 C4 C20 C 0 1 Y N N 14.228 56.022 -4.819 0.729 1.865 -0.008 C4 JL8 25
JL8 O11 O2 O 0 1 N N N 14.254 56.852 -5.889 -0.353 1.325 -0.618 O11 JL8 26
JL8 C12 C21 C 0 1 N N R 15.518 56.794 -6.626 -1.432 2.210 -0.928 C12 JL8 27
JL8 C14 C22 C 0 1 N N N 15.904 55.414 -7.161 -1.229 2.786 -2.306 C14 JL8 28
JL8 O16 O3 O 0 1 N N N 17.077 55.184 -7.441 -0.310 2.404 -2.991 O16 JL8 29
JL8 O15 O4 O 0 1 N N N 15.032 54.565 -7.396 -2.069 3.723 -2.771 O15 JL8 30
JL8 C19 C23 C 0 1 Y N N 15.128 61.777 -6.859 -3.497 0.101 3.101 C19 JL8 31
JL8 C20 C24 C 0 1 Y N N 15.497 61.387 -8.144 -2.794 -0.703 2.223 C20 JL8 32
JL8 H1 H1 H 0 1 N N N 9.703 57.857 -2.472 4.373 -2.459 1.312 H1 JL8 33
JL8 H2 H2 H 0 1 N N N 9.216 57.062 -4.007 2.843 -2.903 0.518 H2 JL8 34
JL8 H3 H3 H 0 1 N N N 14.503 57.349 -8.406 -2.691 0.577 -1.553 H3 JL8 35
JL8 H4 H4 H 0 1 N N N 16.293 57.481 -8.479 -3.564 2.089 -1.209 H4 JL8 36
JL8 H5 H5 H 0 1 N N N 14.571 61.116 -4.890 -4.517 1.960 3.372 H5 JL8 37
JL8 H6 H6 H 0 1 N N N 16.109 53.818 -3.239 1.803 4.755 1.089 H6 JL8 38
JL8 H7 H7 H 0 1 N N N 14.718 58.722 -5.463 -4.088 2.730 1.073 H7 JL8 39
JL8 H8 H8 H 0 1 N N N 15.870 59.743 -9.457 -2.004 -0.898 0.246 H8 JL8 40
JL8 H9 H9 H 0 1 N N N 10.946 57.834 -8.462 0.171 -2.436 -3.549 H9 JL8 41
JL8 H10 H10 H 0 1 N N N 11.505 56.172 -6.723 1.828 -0.956 -2.495 H10 JL8 42
JL8 H11 H11 H 0 1 N N N 10.737 59.374 -2.829 -0.556 -0.851 2.004 H11 JL8 43
JL8 H12 H12 H 0 1 N N N 12.413 58.730 -2.866 -0.303 -2.596 2.247 H12 JL8 44
JL8 H13 H13 H 0 1 N N N 12.095 60.433 -3.342 1.096 -1.504 2.118 H13 JL8 45
JL8 H14 H14 H 0 1 N N N 10.664 61.261 -7.666 -1.435 -4.664 -2.346 H14 JL8 46
JL8 H15 H15 H 0 1 N N N 7.716 56.406 -2.141 3.785 -2.229 -1.675 H15 JL8 47
JL8 H16 H16 H 0 1 N N N 8.642 54.995 -2.754 5.315 -1.785 -0.881 H16 JL8 48
JL8 H17 H17 H 0 1 N N N 9.129 55.790 -1.219 4.787 -3.485 -0.907 H17 JL8 49
JL8 H18 H18 H 0 1 N N N 16.335 57.172 -5.994 -1.461 3.017 -0.197 H18 JL8 50
JL8 H19 H19 H 0 1 N N N 15.433 53.799 -7.790 -1.899 4.063 -3.660 H19 JL8 51
JL8 H20 H20 H 0 1 N N N 15.055 62.826 -6.614 -3.685 -0.237 4.109 H20 JL8 52
JL8 H21 H21 H 0 1 N N N 15.713 62.134 -8.894 -2.434 -1.669 2.545 H21 JL8 53
# #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
JL8 C23 C20 DOUB Y N 1
JL8 C23 C17 SING Y N 2
JL8 C20 C19 SING Y N 3
JL8 O31 C26 SING N N 4
JL8 C13 C17 SING N N 5
JL8 C13 C12 SING N N 6
JL8 C17 C18 DOUB Y N 7
JL8 C27 C26 DOUB Y N 8
JL8 C27 C29 SING Y N 9
JL8 O16 C14 DOUB N N 10
JL8 O15 C14 SING N N 11
JL8 C14 C12 SING N N 12
JL8 C26 C28 SING Y N 13
JL8 C19 C21 DOUB Y N 14
JL8 C12 O11 SING N N 15
JL8 C29 C24 DOUB Y N 16
JL8 C18 C21 SING Y N 17
JL8 O11 C4 SING N N 18
JL8 C28 CL SING N N 19
JL8 C28 C25 DOUB Y N 20
JL8 C24 C25 SING Y N 21
JL8 C24 C7 SING N N 22
JL8 C4 N1 DOUB Y N 23
JL8 C4 C8 SING Y N 24
JL8 C25 C30 SING N N 25
JL8 N1 C2 SING Y N 26
JL8 C7 C8 SING Y N 27
JL8 C7 C6 DOUB Y N 28
JL8 C8 C9 DOUB Y N 29
JL8 C2 N3 DOUB Y N 30
JL8 C6 C10 SING N N 31
JL8 C6 S5 SING Y N 32
JL8 C10 C22 SING N N 33
JL8 C9 N3 SING Y N 34
JL8 C9 S5 SING Y N 35
JL8 C10 H1 SING N N 36
JL8 C10 H2 SING N N 37
JL8 C13 H3 SING N N 38
JL8 C13 H4 SING N N 39
JL8 C21 H5 SING N N 40
JL8 C2 H6 SING N N 41
JL8 C18 H7 SING N N 42
JL8 C23 H8 SING N N 43
JL8 C27 H9 SING N N 44
JL8 C29 H10 SING N N 45
JL8 C30 H11 SING N N 46
JL8 C30 H12 SING N N 47
JL8 C30 H13 SING N N 48
JL8 O31 H14 SING N N 49
JL8 C22 H15 SING N N 50
JL8 C22 H16 SING N N 51
JL8 C22 H17 SING N N 52
JL8 C12 H18 SING N N 53
JL8 O15 H19 SING N N 54
JL8 C19 H20 SING N N 55
JL8 C20 H21 SING N N 56
# #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
JL8 InChI InChI 1.03 "InChI=1S/C24H21ClN2O4S/c1-3-18-19(15-9-10-16(28)21(25)13(15)2)20-22(26-12-27-23(20)32-18)31-17(24(29)30)11-14-7-5-4-6-8-14/h4-10,12,17,28H,3,11H2,1-2H3,(H,29,30)/t17-/m1/s1"
JL8 InChIKey InChI 1.03 RVYMEZGWKUJBHP-QGZVFWFLSA-N
JL8 SMILES_CANONICAL CACTVS 3.385 "CCc1sc2ncnc(O[C@H](Cc3ccccc3)C(O)=O)c2c1c4ccc(O)c(Cl)c4C"
JL8 SMILES CACTVS 3.385 "CCc1sc2ncnc(O[CH](Cc3ccccc3)C(O)=O)c2c1c4ccc(O)c(Cl)c4C"
JL8 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCc1c(c2c(ncnc2s1)O[C@H](Cc3ccccc3)C(=O)O)c4ccc(c(c4C)Cl)O"
JL8 SMILES "OpenEye OEToolkits" 2.0.7 "CCc1c(c2c(ncnc2s1)OC(Cc3ccccc3)C(=O)O)c4ccc(c(c4C)Cl)O"
#
_pdbx_chem_comp_identifier.comp_id JL8
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier "(2~{R})-2-[5-(3-chloranyl-2-methyl-4-oxidanyl-phenyl)-6-ethyl-thieno[2,3-d]pyrimidin-4-yl]oxy-3-phenyl-propanoic acid"
# #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
JL8 "Create component" 2019-03-09 RCSB
JL8 "Initial release" 2019-08-07 RCSB
##