data_JOG # _chem_comp.id JOG _chem_comp.name "(1R,4R,5R,6S)-4,6-dihydroxy-N-phenyl-2-azabicyclo[3.3.1]nonane-2-carboxamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H20 N2 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-09-12 _chem_comp.pdbx_modified_date 2018-10-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 276.331 _chem_comp.one_letter_code ? _chem_comp.three_letter_code JOG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5QFI _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal JOG C10 C1 C 0 1 N N N 50.151 -38.147 -30.751 -1.119 1.013 -0.334 C10 JOG 1 JOG C15 C2 C 0 1 Y N N 46.644 -39.672 -29.049 2.962 0.384 -0.109 C15 JOG 2 JOG C17 C3 C 0 1 Y N N 44.386 -40.370 -29.421 4.912 -0.867 0.508 C17 JOG 3 JOG C20 C4 C 0 1 Y N N 46.422 -39.896 -27.683 3.744 1.202 -0.914 C20 JOG 4 JOG O01 O1 O 0 1 N N N 52.667 -36.853 -31.766 -4.557 0.815 -1.323 O01 JOG 5 JOG C02 C5 C 0 1 N N S 52.980 -38.185 -31.487 -3.943 -0.259 -0.601 C02 JOG 6 JOG C03 C6 C 0 1 N N N 52.983 -38.238 -30.010 -2.923 -0.950 -1.498 C03 JOG 7 JOG C04 C7 C 0 1 N N N 52.582 -39.461 -29.369 -2.111 -1.987 -0.729 C04 JOG 8 JOG C05 C8 C 0 1 N N R 51.412 -40.100 -29.947 -1.478 -1.368 0.517 C05 JOG 9 JOG C06 C9 C 0 1 N N N 51.775 -40.377 -31.399 -2.589 -0.836 1.427 C06 JOG 10 JOG C07 C10 C 0 1 N N R 51.969 -39.099 -32.145 -3.320 0.280 0.678 C07 JOG 11 JOG C08 C11 C 0 1 N N R 50.606 -38.420 -32.153 -2.373 1.442 0.416 C08 JOG 12 JOG O09 O2 O 0 1 N N N 49.749 -39.291 -32.692 -1.997 2.036 1.666 O09 JOG 13 JOG N11 N1 N 0 1 N N N 50.144 -39.305 -29.992 -0.590 -0.263 0.145 N11 JOG 14 JOG C12 C12 C 0 1 N N N 49.061 -39.964 -29.418 0.754 -0.428 0.249 C12 JOG 15 JOG O13 O3 O 0 1 N N N 49.145 -40.978 -28.836 1.210 -1.504 0.583 O13 JOG 16 JOG N14 N2 N 0 1 N N N 47.855 -39.233 -29.555 1.582 0.601 -0.019 N14 JOG 17 JOG C16 C13 C 0 1 Y N N 45.576 -39.942 -29.894 3.551 -0.652 0.603 C16 JOG 18 JOG C18 C14 C 0 1 Y N N 44.176 -40.571 -28.080 5.689 -0.045 -0.287 C18 JOG 19 JOG C19 C15 C 0 1 Y N N 45.221 -40.314 -27.230 5.105 0.984 -1.001 C19 JOG 20 JOG H101 H1 H 0 0 N N N 50.833 -37.419 -30.288 -1.302 0.983 -1.406 H101 JOG 21 JOG H102 H2 H 0 0 N N N 49.133 -37.730 -30.779 -0.343 1.784 -0.173 H102 JOG 22 JOG H171 H3 H 0 0 N N N 43.580 -40.559 -30.115 5.371 -1.671 1.065 H171 JOG 23 JOG H201 H4 H 0 0 N N N 47.226 -39.731 -26.981 3.288 2.006 -1.473 H201 JOG 24 JOG H011 H5 H 0 0 N N N 53.304 -36.284 -31.351 -5.021 0.536 -2.123 H011 JOG 25 JOG H021 H6 H 0 0 N N N 53.983 -38.433 -31.863 -4.725 -0.981 -0.336 H021 JOG 26 JOG H032 H7 H 0 0 N N N 54.009 -38.018 -29.679 -3.471 -1.472 -2.301 H032 JOG 27 JOG H031 H8 H 0 0 N N N 52.306 -37.447 -29.655 -2.272 -0.227 -1.976 H031 JOG 28 JOG H041 H9 H 0 0 N N N 53.422 -40.169 -29.428 -2.765 -2.812 -0.431 H041 JOG 29 JOG H042 H10 H 0 0 N N N 52.363 -39.238 -28.314 -1.325 -2.386 -1.376 H042 JOG 30 JOG H051 H11 H 0 0 N N N 51.221 -41.057 -29.439 -0.904 -2.134 1.055 H051 JOG 31 JOG H061 H12 H 0 0 N N N 50.964 -40.952 -31.871 -3.288 -1.638 1.661 H061 JOG 32 JOG H062 H13 H 0 0 N N N 52.707 -40.961 -31.434 -2.159 -0.443 2.346 H062 JOG 33 JOG H071 H14 H 0 0 N N N 52.280 -39.311 -33.179 -4.133 0.642 1.328 H071 JOG 34 JOG H081 H15 H 0 0 N N N 50.664 -37.479 -32.720 -2.898 2.204 -0.174 H081 JOG 35 JOG H091 H16 H 0 0 N N N 48.880 -38.907 -32.717 -1.393 2.785 1.579 H091 JOG 36 JOG H141 H17 H 0 0 N N N 47.880 -38.359 -30.040 1.222 1.492 -0.150 H141 JOG 37 JOG H161 H18 H 0 0 N N N 45.700 -39.806 -30.958 2.945 -1.289 1.231 H161 JOG 38 JOG H181 H19 H 0 0 N N N 43.224 -40.919 -27.708 6.755 -0.208 -0.350 H181 JOG 39 JOG H191 H20 H 0 0 N N N 45.079 -40.450 -26.168 5.714 1.620 -1.628 H191 JOG 40 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal JOG O09 C08 SING N N 1 JOG C08 C07 SING N N 2 JOG C08 C10 SING N N 3 JOG C07 C02 SING N N 4 JOG C07 C06 SING N N 5 JOG O01 C02 SING N N 6 JOG C02 C03 SING N N 7 JOG C06 C05 SING N N 8 JOG C10 N11 SING N N 9 JOG C03 C04 SING N N 10 JOG N11 C05 SING N N 11 JOG N11 C12 SING N N 12 JOG C05 C04 SING N N 13 JOG C16 C17 DOUB Y N 14 JOG C16 C15 SING Y N 15 JOG N14 C12 SING N N 16 JOG N14 C15 SING N N 17 JOG C17 C18 SING Y N 18 JOG C12 O13 DOUB N N 19 JOG C15 C20 DOUB Y N 20 JOG C18 C19 DOUB Y N 21 JOG C20 C19 SING Y N 22 JOG C10 H101 SING N N 23 JOG C10 H102 SING N N 24 JOG C17 H171 SING N N 25 JOG C20 H201 SING N N 26 JOG O01 H011 SING N N 27 JOG C02 H021 SING N N 28 JOG C03 H032 SING N N 29 JOG C03 H031 SING N N 30 JOG C04 H041 SING N N 31 JOG C04 H042 SING N N 32 JOG C05 H051 SING N N 33 JOG C06 H061 SING N N 34 JOG C06 H062 SING N N 35 JOG C07 H071 SING N N 36 JOG C08 H081 SING N N 37 JOG O09 H091 SING N N 38 JOG N14 H141 SING N N 39 JOG C16 H161 SING N N 40 JOG C18 H181 SING N N 41 JOG C19 H191 SING N N 42 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor JOG SMILES ACDLabs 12.01 "C2N(C1CCC(O)C(C1)C2O)C(=O)Nc3ccccc3" JOG InChI InChI 1.03 "InChI=1S/C15H20N2O3/c18-13-7-6-11-8-12(13)14(19)9-17(11)15(20)16-10-4-2-1-3-5-10/h1-5,11-14,18-19H,6-9H2,(H,16,20)/t11-,12-,13+,14+/m1/s1" JOG InChIKey InChI 1.03 JCBMUSSCLKFNPY-MQYQWHSLSA-N JOG SMILES_CANONICAL CACTVS 3.385 "O[C@H]1CC[C@@H]2C[C@H]1[C@@H](O)CN2C(=O)Nc3ccccc3" JOG SMILES CACTVS 3.385 "O[CH]1CC[CH]2C[CH]1[CH](O)CN2C(=O)Nc3ccccc3" JOG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccc(cc1)NC(=O)N2C[C@@H]([C@@H]3C[C@H]2CC[C@@H]3O)O" JOG SMILES "OpenEye OEToolkits" 2.0.6 "c1ccc(cc1)NC(=O)N2CC(C3CC2CCC3O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier JOG "SYSTEMATIC NAME" ACDLabs 12.01 "(1R,4R,5R,6S)-4,6-dihydroxy-N-phenyl-2-azabicyclo[3.3.1]nonane-2-carboxamide" JOG "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(1~{R},4~{R},5~{R},6~{S})-4,6-bis(oxidanyl)-~{N}-phenyl-2-azabicyclo[3.3.1]nonane-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site JOG "Create component" 2018-09-12 RCSB JOG "Initial release" 2018-10-10 RCSB #