data_JOT # _chem_comp.id JOT _chem_comp.name "~{N}-[(3~{S})-2,5-bis(oxidanylidene)pyrrolidin-3-yl]-2-phenyl-ethanamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H12 N2 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-03-14 _chem_comp.pdbx_modified_date 2019-08-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 232.235 _chem_comp.one_letter_code ? _chem_comp.three_letter_code JOT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6R12 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal JOT C4 C1 C 0 1 N N N 22.432 13.933 26.202 -2.492 -1.016 0.251 C4 JOT 1 JOT C5 C2 C 0 1 N N N 24.415 15.547 28.185 0.333 0.462 -0.118 C5 JOT 2 JOT C6 C3 C 0 1 N N N 24.238 16.043 29.588 1.426 0.857 -1.078 C6 JOT 3 JOT C11 C4 C 0 1 Y N N 21.092 17.973 30.009 4.717 0.798 0.771 C11 JOT 4 JOT C7 C5 C 0 1 Y N N 23.275 17.194 29.691 2.756 0.394 -0.543 C7 JOT 5 JOT C8 C6 C 0 1 Y N N 23.777 18.486 29.714 3.236 -0.859 -0.874 C8 JOT 6 JOT C9 C7 C 0 1 Y N N 22.902 19.555 29.812 4.459 -1.282 -0.388 C9 JOT 7 JOT C10 C8 C 0 1 Y N N 21.583 19.256 30.109 5.197 -0.456 0.439 C10 JOT 8 JOT C12 C9 C 0 1 Y N N 21.963 16.947 29.792 3.496 1.222 0.280 C12 JOT 9 JOT N1 N1 N 0 1 N N N 21.963 12.795 25.627 -3.790 -0.980 -0.074 N1 JOT 10 JOT N2 N2 N 0 1 N N N 24.019 14.297 27.998 -0.950 0.774 -0.392 N2 JOT 11 JOT C3 C10 C 0 1 N N S 23.830 13.683 26.709 -2.012 0.389 0.541 C3 JOT 12 JOT C1 C11 C 0 1 N N N 22.776 11.714 25.738 -4.329 0.246 -0.070 C1 JOT 13 JOT C2 C12 C 0 1 N N N 23.924 12.105 26.591 -3.269 1.254 0.318 C2 JOT 14 JOT O1 O1 O 0 1 N N N 22.634 10.711 25.147 -5.483 0.506 -0.334 O1 JOT 15 JOT O2 O2 O 0 1 N N N 21.811 14.971 26.220 -1.811 -2.017 0.310 O2 JOT 16 JOT O3 O3 O 0 1 N N N 25.092 16.190 27.329 0.607 -0.137 0.900 O3 JOT 17 JOT H1 H1 H 0 1 N N N 23.861 15.215 30.207 1.243 0.394 -2.047 H1 JOT 18 JOT H2 H2 H 0 1 N N N 25.216 16.370 29.969 1.436 1.941 -1.189 H2 JOT 19 JOT H3 H3 H 0 1 N N N 20.033 17.783 30.101 5.293 1.443 1.417 H3 JOT 20 JOT H4 H4 H 0 1 N N N 24.842 18.657 29.656 2.658 -1.506 -1.517 H4 JOT 21 JOT H5 H5 H 0 1 N N N 23.232 20.573 29.664 4.834 -2.261 -0.647 H5 JOT 22 JOT H6 H6 H 0 1 N N N 20.922 20.049 30.427 6.148 -0.789 0.826 H6 JOT 23 JOT H7 H7 H 0 1 N N N 21.595 15.936 29.702 3.122 2.202 0.538 H7 JOT 24 JOT H8 H8 H 0 1 N N N 21.082 12.757 25.156 -4.298 -1.776 -0.295 H8 JOT 25 JOT H9 H9 H 0 1 N N N 23.839 13.740 28.809 -1.169 1.253 -1.206 H9 JOT 26 JOT H10 H10 H 0 1 N N N 24.544 14.113 25.991 -1.665 0.471 1.571 H10 JOT 27 JOT H11 H11 H 0 1 N N N 23.845 11.638 27.584 -3.548 1.769 1.237 H11 JOT 28 JOT H12 H12 H 0 1 N N N 24.873 11.808 26.121 -3.106 1.969 -0.489 H12 JOT 29 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal JOT O1 C1 DOUB N N 1 JOT N1 C1 SING N N 2 JOT N1 C4 SING N N 3 JOT C1 C2 SING N N 4 JOT C4 O2 DOUB N N 5 JOT C4 C3 SING N N 6 JOT C2 C3 SING N N 7 JOT C3 N2 SING N N 8 JOT O3 C5 DOUB N N 9 JOT N2 C5 SING N N 10 JOT C5 C6 SING N N 11 JOT C6 C7 SING N N 12 JOT C7 C8 DOUB Y N 13 JOT C7 C12 SING Y N 14 JOT C8 C9 SING Y N 15 JOT C12 C11 DOUB Y N 16 JOT C9 C10 DOUB Y N 17 JOT C11 C10 SING Y N 18 JOT C6 H1 SING N N 19 JOT C6 H2 SING N N 20 JOT C11 H3 SING N N 21 JOT C8 H4 SING N N 22 JOT C9 H5 SING N N 23 JOT C10 H6 SING N N 24 JOT C12 H7 SING N N 25 JOT N1 H8 SING N N 26 JOT N2 H9 SING N N 27 JOT C3 H10 SING N N 28 JOT C2 H11 SING N N 29 JOT C2 H12 SING N N 30 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor JOT InChI InChI 1.03 "InChI=1S/C12H12N2O3/c15-10(6-8-4-2-1-3-5-8)13-9-7-11(16)14-12(9)17/h1-5,9H,6-7H2,(H,13,15)(H,14,16,17)/t9-/m0/s1" JOT InChIKey InChI 1.03 ZTMDMWMWWGOUHX-VIFPVBQESA-N JOT SMILES_CANONICAL CACTVS 3.385 "O=C1C[C@H](NC(=O)Cc2ccccc2)C(=O)N1" JOT SMILES CACTVS 3.385 "O=C1C[CH](NC(=O)Cc2ccccc2)C(=O)N1" JOT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CC(=O)N[C@H]2CC(=O)NC2=O" JOT SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CC(=O)NC2CC(=O)NC2=O" # _pdbx_chem_comp_identifier.comp_id JOT _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[(3~{S})-2,5-bis(oxidanylidene)pyrrolidin-3-yl]-2-phenyl-ethanamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site JOT "Create component" 2019-03-14 RCSB JOT "Initial release" 2019-08-07 RCSB ##