data_JPF # _chem_comp.id JPF _chem_comp.name "6-[(3-methylphenyl)sulfanyl]-2-[4-(pyridin-2-yl)piperazin-1-yl]-9H-purine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H21 N7 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-02-01 _chem_comp.pdbx_modified_date 2022-10-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 403.503 _chem_comp.one_letter_code ? _chem_comp.three_letter_code JPF _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5SIH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal JPF N1 N1 N 0 1 Y N N 94.707 -9.811 12.525 0.558 -0.027 -0.391 N1 JPF 1 JPF N3 N2 N 0 1 Y N N 96.952 -10.100 11.799 -0.475 1.870 -1.239 N3 JPF 2 JPF C4 C1 C 0 1 Y N N 94.937 -8.523 12.765 1.167 0.667 0.565 C4 JPF 3 JPF C5 C2 C 0 1 Y N N 96.226 -7.992 12.563 0.946 2.054 0.634 C5 JPF 4 JPF C6 C3 C 0 1 Y N N 97.261 -8.832 12.053 0.092 2.640 -0.315 C6 JPF 5 JPF C8 C4 C 0 1 Y N N 98.112 -6.807 12.405 0.864 4.178 1.064 C8 JPF 6 JPF C10 C5 C 0 1 Y N N 91.890 -9.086 14.799 4.576 -1.406 1.135 C10 JPF 7 JPF C13 C6 C 0 1 Y N N 90.046 -10.209 13.683 5.614 -1.355 -1.023 C13 JPF 8 JPF C15 C7 C 0 1 Y N N 91.532 -8.929 12.319 3.553 -0.188 -0.669 C15 JPF 9 JPF C17 C8 C 0 1 Y N N 90.402 -9.732 12.384 4.588 -0.563 -1.503 C17 JPF 10 JPF C22 C9 C 0 1 N N N 95.855 -12.458 9.333 -3.103 0.387 -1.485 C22 JPF 11 JPF C24 C10 C 0 1 Y N N 94.676 -13.828 7.316 -4.557 -2.278 0.574 C24 JPF 12 JPF C26 C11 C 0 1 N N N 94.066 -12.136 11.814 -1.045 -1.582 -1.785 C26 JPF 13 JPF C28 C12 C 0 1 Y N N 94.078 -14.301 6.137 -5.490 -2.319 1.593 C28 JPF 14 JPF C2 C13 C 0 1 Y N N 95.734 -10.549 12.037 -0.241 0.568 -1.267 C2 JPF 15 JPF N7 N3 N 0 1 Y N N 98.441 -8.060 11.956 0.059 3.979 -0.019 N7 JPF 16 JPF N9 N4 N 0 1 Y N N 96.812 -6.781 12.768 1.383 3.047 1.446 N9 JPF 17 JPF C11 C14 C 0 1 Y N N 90.784 -9.894 14.861 5.608 -1.777 0.295 C11 JPF 18 JPF C12 C15 C 0 1 Y N N 92.262 -8.643 13.536 3.544 -0.609 0.655 C12 JPF 19 JPF C14 C16 C 0 1 N N N 90.343 -10.362 16.240 6.728 -2.641 0.814 C14 JPF 20 JPF S16 S1 S 0 1 N N N 93.628 -7.560 13.475 2.226 -0.134 1.724 S16 JPF 21 JPF N18 N5 N 0 1 N N N 94.474 -12.993 9.578 -3.297 -0.995 -1.024 N18 JPF 22 JPF C19 C17 C 0 1 Y N N 93.860 -13.388 8.393 -4.233 -1.051 0.002 C19 JPF 23 JPF N20 N6 N 0 1 Y N N 92.544 -13.418 8.295 -4.810 0.063 0.426 N20 JPF 24 JPF N21 N7 N 0 1 N N N 95.524 -11.868 11.794 -0.851 -0.200 -2.245 N21 JPF 25 JPF C23 C18 C 0 1 N N N 93.551 -12.149 10.388 -2.021 -1.592 -0.605 C23 JPF 26 JPF C25 C19 C 0 1 N N N 96.446 -12.458 10.751 -2.127 0.396 -2.664 C25 JPF 27 JPF C27 C20 C 0 1 Y N N 91.972 -13.810 7.151 -5.704 0.053 1.396 C27 JPF 28 JPF C29 C21 C 0 1 Y N N 92.684 -14.266 6.053 -6.076 -1.129 2.004 C29 JPF 29 JPF H1 H1 H 0 1 N N N 98.790 -5.968 12.460 1.043 5.133 1.536 H1 JPF 30 JPF H2 H2 H 0 1 N N N 92.442 -8.809 15.685 4.570 -1.739 2.162 H2 JPF 31 JPF H3 H3 H 0 1 N N N 89.174 -10.840 13.777 6.422 -1.647 -1.677 H3 JPF 32 JPF H4 H4 H 0 1 N N N 91.862 -8.523 11.374 2.752 0.431 -1.045 H4 JPF 33 JPF H5 H5 H 0 1 N N N 89.826 -9.982 11.505 4.596 -0.236 -2.533 H5 JPF 34 JPF H6 H6 H 0 1 N N N 96.426 -13.115 8.661 -4.059 0.803 -1.801 H6 JPF 35 JPF H7 H7 H 0 1 N N N 95.823 -11.442 8.912 -2.696 0.988 -0.671 H7 JPF 36 JPF H8 H8 H 0 1 N N N 95.752 -13.799 7.404 -4.082 -3.185 0.229 H8 JPF 37 JPF H9 H9 H 0 1 N N N 93.876 -13.112 12.284 -1.452 -2.183 -2.598 H9 JPF 38 JPF H10 H10 H 0 1 N N N 93.553 -11.348 12.385 -0.088 -1.998 -1.469 H10 JPF 39 JPF H11 H11 H 0 1 N N N 94.676 -14.680 5.321 -5.758 -3.256 2.058 H11 JPF 40 JPF H12 H12 H 0 1 N N N 99.334 -8.366 11.627 -0.443 4.660 -0.493 H12 JPF 41 JPF H14 H14 H 0 1 N N N 89.653 -9.624 16.675 6.474 -3.691 0.668 H14 JPF 42 JPF H15 H15 H 0 1 N N N 89.834 -11.333 16.152 7.645 -2.410 0.273 H15 JPF 43 JPF H16 H16 H 0 1 N N N 91.224 -10.468 16.890 6.874 -2.447 1.877 H16 JPF 44 JPF H17 H17 H 0 1 N N N 93.532 -11.125 9.988 -2.189 -2.619 -0.281 H17 JPF 45 JPF H18 H18 H 0 1 N N N 92.536 -12.572 10.361 -1.602 -1.013 0.218 H18 JPF 46 JPF H19 H19 H 0 1 N N N 97.377 -11.872 10.739 -2.546 -0.182 -3.487 H19 JPF 47 JPF H20 H20 H 0 1 N N N 96.670 -13.497 11.034 -1.959 1.423 -2.989 H20 JPF 48 JPF H21 H21 H 0 1 N N N 90.895 -13.769 7.079 -6.154 0.981 1.716 H21 JPF 49 JPF H22 H22 H 0 1 N N N 92.175 -14.586 5.156 -6.808 -1.127 2.798 H22 JPF 50 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal JPF N1 C2 DOUB Y N 1 JPF N1 C4 SING Y N 2 JPF C2 N3 SING Y N 3 JPF C2 N21 SING N N 4 JPF N3 C6 DOUB Y N 5 JPF C4 C5 DOUB Y N 6 JPF C4 S16 SING N N 7 JPF C5 N9 SING Y N 8 JPF C5 C6 SING Y N 9 JPF C6 N7 SING Y N 10 JPF N7 C8 SING Y N 11 JPF C8 N9 DOUB Y N 12 JPF C10 C11 DOUB Y N 13 JPF C10 C12 SING Y N 14 JPF C11 C13 SING Y N 15 JPF C11 C14 SING N N 16 JPF C12 C15 DOUB Y N 17 JPF C12 S16 SING N N 18 JPF C13 C17 DOUB Y N 19 JPF C15 C17 SING Y N 20 JPF N18 C19 SING N N 21 JPF N18 C22 SING N N 22 JPF N18 C23 SING N N 23 JPF C19 N20 DOUB Y N 24 JPF C19 C24 SING Y N 25 JPF N20 C27 SING Y N 26 JPF N21 C26 SING N N 27 JPF N21 C25 SING N N 28 JPF C22 C25 SING N N 29 JPF C23 C26 SING N N 30 JPF C24 C28 DOUB Y N 31 JPF C27 C29 DOUB Y N 32 JPF C28 C29 SING Y N 33 JPF C8 H1 SING N N 34 JPF C10 H2 SING N N 35 JPF C13 H3 SING N N 36 JPF C15 H4 SING N N 37 JPF C17 H5 SING N N 38 JPF C22 H6 SING N N 39 JPF C22 H7 SING N N 40 JPF C24 H8 SING N N 41 JPF C26 H9 SING N N 42 JPF C26 H10 SING N N 43 JPF C28 H11 SING N N 44 JPF N7 H12 SING N N 45 JPF C14 H14 SING N N 46 JPF C14 H15 SING N N 47 JPF C14 H16 SING N N 48 JPF C23 H17 SING N N 49 JPF C23 H18 SING N N 50 JPF C25 H19 SING N N 51 JPF C25 H20 SING N N 52 JPF C27 H21 SING N N 53 JPF C29 H22 SING N N 54 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor JPF SMILES ACDLabs 12.01 "Cc1cc(ccc1)Sc1nc(nc2[NH]cnc12)N1CCN(CC1)c1ccccn1" JPF InChI InChI 1.03 "InChI=1S/C21H21N7S/c1-15-5-4-6-16(13-15)29-20-18-19(24-14-23-18)25-21(26-20)28-11-9-27(10-12-28)17-7-2-3-8-22-17/h2-8,13-14H,9-12H2,1H3,(H,23,24,25,26)" JPF InChIKey InChI 1.03 PIOPFGAPEWSFOW-UHFFFAOYSA-N JPF SMILES_CANONICAL CACTVS 3.385 "Cc1cccc(Sc2nc(nc3[nH]cnc23)N4CCN(CC4)c5ccccn5)c1" JPF SMILES CACTVS 3.385 "Cc1cccc(Sc2nc(nc3[nH]cnc23)N4CCN(CC4)c5ccccn5)c1" JPF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cccc(c1)Sc2c3c([nH]cn3)nc(n2)N4CCN(CC4)c5ccccn5" JPF SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cccc(c1)Sc2c3c([nH]cn3)nc(n2)N4CCN(CC4)c5ccccn5" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier JPF "SYSTEMATIC NAME" ACDLabs 12.01 "6-[(3-methylphenyl)sulfanyl]-2-[4-(pyridin-2-yl)piperazin-1-yl]-9H-purine" JPF "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "6-(3-methylphenyl)sulfanyl-2-(4-pyridin-2-ylpiperazin-1-yl)-9~{H}-purine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site JPF "Create component" 2022-02-01 RCSB JPF "Initial release" 2022-10-12 RCSB #