data_JRT # _chem_comp.id JRT _chem_comp.name "2-(benzimidazol-1-yl)-~{N}-(2-phenylethyl)ethanamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H17 N3 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-03-22 _chem_comp.pdbx_modified_date 2019-05-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 279.336 _chem_comp.one_letter_code ? _chem_comp.three_letter_code JRT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6R4A _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal JRT N1 N1 N 0 1 Y N N -13.166 13.502 -21.753 -2.778 1.039 0.366 N1 JRT 1 JRT N3 N2 N 0 1 N N N -10.901 11.507 -19.669 0.848 0.797 1.005 N3 JRT 2 JRT C4 C1 C 0 1 Y N N -14.491 15.261 -22.012 -4.569 0.197 -0.651 C4 JRT 3 JRT C5 C2 C 0 1 Y N N -13.211 14.878 -21.615 -3.532 -0.112 0.246 C5 JRT 4 JRT C6 C3 C 0 1 Y N N -12.268 15.799 -21.181 -3.451 -1.382 0.799 C6 JRT 5 JRT C7 C4 C 0 1 Y N N -12.641 17.122 -21.155 -4.391 -2.334 0.463 C7 JRT 6 JRT C8 C5 C 0 1 Y N N -13.917 17.524 -21.553 -5.415 -2.029 -0.423 C8 JRT 7 JRT C10 C6 C 0 1 N N N -9.581 11.981 -19.276 2.026 0.334 0.267 C10 JRT 8 JRT C13 C7 C 0 1 Y N N -11.439 13.787 -16.854 4.889 -1.281 0.473 C13 JRT 9 JRT C15 C8 C 0 1 Y N N -11.828 16.102 -17.301 6.704 -0.839 -1.024 C15 JRT 10 JRT C17 C9 C 0 1 Y N N -9.963 14.988 -18.294 5.193 0.918 -0.422 C17 JRT 11 JRT O1 O1 O 0 1 N N N -12.860 12.529 -19.202 -0.495 0.294 -0.687 O1 JRT 12 JRT C1 C10 C 0 1 N N N -11.963 12.251 -19.991 -0.372 0.734 0.436 C1 JRT 13 JRT C2 C11 C 0 1 N N N -12.025 12.666 -21.457 -1.583 1.211 1.196 C2 JRT 14 JRT C3 C12 C 0 1 Y N N -14.388 13.122 -22.220 -3.348 1.981 -0.433 C3 JRT 15 JRT N2 N3 N 0 1 Y N N -15.209 14.129 -22.391 -4.393 1.488 -1.031 N2 JRT 16 JRT C9 C13 C 0 1 Y N N -14.852 16.607 -21.984 -5.510 -0.784 -0.976 C9 JRT 17 JRT C11 C14 C 0 1 N N N -9.493 12.556 -17.875 3.274 0.514 1.133 C11 JRT 18 JRT C12 C15 C 0 1 Y N N -10.321 13.802 -17.674 4.485 0.037 0.374 C12 JRT 19 JRT C14 C16 C 0 1 Y N N -12.188 14.934 -16.670 5.999 -1.719 -0.224 C14 JRT 20 JRT C16 C17 C 0 1 Y N N -10.718 16.130 -18.113 6.298 0.478 -1.127 C16 JRT 21 JRT H8 H1 H 0 1 N N N -11.026 10.515 -19.701 0.947 1.150 1.904 H8 JRT 22 JRT H4 H2 H 0 1 N N N -11.280 15.489 -20.876 -2.656 -1.625 1.488 H4 JRT 23 JRT H5 H3 H 0 1 N N N -11.933 17.865 -20.820 -4.330 -3.323 0.892 H5 JRT 24 JRT H6 H4 H 0 1 N N N -14.177 18.572 -21.523 -6.143 -2.784 -0.677 H6 JRT 25 JRT H9 H5 H 0 1 N N N -8.882 11.134 -19.341 1.906 -0.720 0.017 H9 JRT 26 JRT H10 H6 H 0 1 N N N -9.275 12.764 -19.985 2.132 0.915 -0.649 H10 JRT 27 JRT H13 H7 H 0 1 N N N -11.727 12.873 -16.356 4.338 -1.969 1.099 H13 JRT 28 JRT H15 H8 H 0 1 N N N -12.416 16.996 -17.159 7.572 -1.181 -1.568 H15 JRT 29 JRT H17 H9 H 0 1 N N N -9.086 15.020 -18.924 4.876 1.947 -0.503 H17 JRT 30 JRT H2 H10 H 0 1 N N N -12.083 11.759 -22.077 -1.463 2.265 1.446 H2 JRT 31 JRT H1 H11 H 0 1 N N N -11.108 13.221 -21.704 -1.689 0.630 2.112 H1 JRT 32 JRT H3 H12 H 0 1 N N N -14.653 12.096 -22.428 -2.985 2.991 -0.553 H3 JRT 33 JRT H7 H13 H 0 1 N N N -15.838 16.923 -22.292 -6.311 -0.557 -1.664 H7 JRT 34 JRT H11 H14 H 0 1 N N N -9.839 11.791 -17.164 3.394 1.568 1.384 H11 JRT 35 JRT H12 H15 H 0 1 N N N -8.441 12.801 -17.666 3.168 -0.067 2.049 H12 JRT 36 JRT H14 H16 H 0 1 N N N -13.057 14.913 -16.030 6.317 -2.748 -0.143 H14 JRT 37 JRT H16 H17 H 0 1 N N N -10.437 17.047 -18.610 6.851 1.167 -1.749 H16 JRT 38 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal JRT N2 C3 DOUB Y N 1 JRT N2 C4 SING Y N 2 JRT C3 N1 SING Y N 3 JRT C4 C9 DOUB Y N 4 JRT C4 C5 SING Y N 5 JRT C9 C8 SING Y N 6 JRT N1 C5 SING Y N 7 JRT N1 C2 SING N N 8 JRT C5 C6 DOUB Y N 9 JRT C8 C7 DOUB Y N 10 JRT C2 C1 SING N N 11 JRT C6 C7 SING Y N 12 JRT C1 N3 SING N N 13 JRT C1 O1 DOUB N N 14 JRT N3 C10 SING N N 15 JRT C10 C11 SING N N 16 JRT C17 C16 DOUB Y N 17 JRT C17 C12 SING Y N 18 JRT C16 C15 SING Y N 19 JRT C11 C12 SING N N 20 JRT C12 C13 DOUB Y N 21 JRT C15 C14 DOUB Y N 22 JRT C13 C14 SING Y N 23 JRT N3 H8 SING N N 24 JRT C6 H4 SING N N 25 JRT C7 H5 SING N N 26 JRT C8 H6 SING N N 27 JRT C10 H9 SING N N 28 JRT C10 H10 SING N N 29 JRT C13 H13 SING N N 30 JRT C15 H15 SING N N 31 JRT C17 H17 SING N N 32 JRT C2 H2 SING N N 33 JRT C2 H1 SING N N 34 JRT C3 H3 SING N N 35 JRT C9 H7 SING N N 36 JRT C11 H11 SING N N 37 JRT C11 H12 SING N N 38 JRT C14 H14 SING N N 39 JRT C16 H16 SING N N 40 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor JRT InChI InChI 1.03 "InChI=1S/C17H17N3O/c21-17(18-11-10-14-6-2-1-3-7-14)12-20-13-19-15-8-4-5-9-16(15)20/h1-9,13H,10-12H2,(H,18,21)" JRT InChIKey InChI 1.03 CAHHWKPTYNNMOV-UHFFFAOYSA-N JRT SMILES_CANONICAL CACTVS 3.385 "O=C(Cn1cnc2ccccc12)NCCc3ccccc3" JRT SMILES CACTVS 3.385 "O=C(Cn1cnc2ccccc12)NCCc3ccccc3" JRT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CCNC(=O)Cn2cnc3c2cccc3" JRT SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CCNC(=O)Cn2cnc3c2cccc3" # _pdbx_chem_comp_identifier.comp_id JRT _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-(benzimidazol-1-yl)-~{N}-(2-phenylethyl)ethanamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site JRT "Create component" 2019-03-22 RCSB JRT "Initial release" 2019-05-08 RCSB ##