data_JSS # _chem_comp.id JSS _chem_comp.name "6-{[(3S,4S)-4-(2-{[2-(3-fluorophenyl)ethyl]amino}ethoxy)pyrrolidin-3-yl]methyl}-4-methylpyridin-2-amine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H29 F N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-06-23 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 372.480 _chem_comp.one_letter_code ? _chem_comp.three_letter_code JSS _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3NLD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal JSS C1 C1 C 0 1 N N N -0.227 3.412 65.287 -0.134 3.445 -0.599 C1 JSS 1 JSS O1 O1 O 0 1 N N N -0.343 4.665 64.599 -1.054 2.505 -0.039 O1 JSS 2 JSS C2 C2 C 0 1 N N N 1.065 2.727 64.858 1.286 3.099 -0.150 C2 JSS 3 JSS N2 N2 N 0 1 N N N 1.055 2.372 63.458 1.673 1.797 -0.710 N2 JSS 4 JSS C3 C3 C 0 1 N N N 0.668 1.024 63.126 3.035 1.431 -0.299 C3 JSS 5 JSS C4 C4 C 0 1 N N N 0.675 0.792 61.629 3.401 0.072 -0.900 C4 JSS 6 JSS "N1'" "N1'" N 0 1 N N N -2.721 7.120 64.183 -4.481 3.115 0.760 "N1'" JSS 7 JSS C11 C11 C 0 1 Y N N 0.219 -0.620 61.411 4.799 -0.303 -0.478 C11 JSS 8 JSS C12 C12 C 0 1 Y N N 1.124 -1.647 61.650 4.999 -1.023 0.684 C12 JSS 9 JSS C13 C13 C 0 1 Y N N 0.707 -2.966 61.457 6.283 -1.368 1.072 C13 JSS 10 JSS F13 F13 F 0 1 N N N 1.591 -3.956 61.696 6.480 -2.072 2.208 F13 JSS 11 JSS C14 C14 C 0 1 Y N N -0.608 -3.258 61.042 7.364 -0.992 0.293 C14 JSS 12 JSS C15 C15 C 0 1 Y N N -1.520 -2.223 60.811 7.161 -0.272 -0.869 C15 JSS 13 JSS C16 C16 C 0 1 Y N N -1.100 -0.900 60.998 5.878 0.067 -1.257 C16 JSS 14 JSS N1A N1A N 0 1 Y N N -0.196 9.648 66.357 -4.208 -1.168 0.601 N1A JSS 15 JSS "C2'" "C2'" C 0 1 N N N -2.236 5.837 63.798 -3.099 3.647 0.648 "C2'" JSS 16 JSS C2A C2A C 0 1 Y N N 0.203 8.428 66.696 -3.070 -1.036 -0.054 C2A JSS 17 JSS "C3'" "C3'" C 0 1 N N S -1.519 5.346 65.040 -2.417 2.740 -0.399 "C3'" JSS 18 JSS C3A C3A C 0 1 Y N N 0.749 8.222 67.936 -2.572 -2.068 -0.823 C3A JSS 19 JSS "C4'" "C4'" C 0 1 N N S -1.273 6.549 65.944 -3.214 1.420 -0.366 "C4'" JSS 20 JSS C4A C4A C 0 1 Y N N 0.841 9.253 68.829 -3.282 -3.259 -0.905 C4A JSS 21 JSS "C5'" "C5'" C 0 1 N N N -2.469 7.405 65.593 -4.311 1.640 0.698 "C5'" JSS 22 JSS C5A C5A C 0 1 Y N N 0.377 10.520 68.464 -4.471 -3.368 -0.207 C5A JSS 23 JSS C6A C6A C 0 1 Y N N -0.132 10.687 67.200 -4.913 -2.287 0.549 C6A JSS 24 JSS N6A N6A N 0 1 N N N -0.571 11.891 66.717 -6.107 -2.383 1.255 N6A JSS 25 JSS C7A C7A C 0 1 N N N 0.060 7.325 65.682 -2.304 0.259 0.039 C7A JSS 26 JSS C8A C8A C 0 1 N N N 1.414 8.939 70.199 -2.768 -4.406 -1.736 C8A JSS 27 JSS H1 H1 H 0 1 N N N -0.209 3.587 66.373 -0.192 3.406 -1.687 H1 JSS 28 JSS H1A H1A H 0 1 N N N -1.085 2.772 65.036 -0.389 4.449 -0.258 H1A JSS 29 JSS H2 H2 H 0 1 N N N 1.904 3.416 65.039 1.976 3.865 -0.503 H2 JSS 30 JSS H2A H2A H 0 1 N N N 1.189 1.809 65.451 1.322 3.051 0.939 H2A JSS 31 JSS HN2 HN2 H 0 1 N N N 0.405 2.983 63.006 1.012 1.081 -0.450 HN2 JSS 32 JSS H3 H3 H 0 1 N N N 1.378 0.327 63.595 3.737 2.186 -0.653 H3 JSS 33 JSS H3A H3A H 0 1 N N N -0.348 0.844 63.507 3.083 1.372 0.789 H3A JSS 34 JSS H4 H4 H 0 1 N N N -0.005 1.497 61.128 2.700 -0.683 -0.546 H4 JSS 35 JSS H4A H4A H 0 1 N N N 1.687 0.936 61.223 3.354 0.131 -1.987 H4A JSS 36 JSS "HN1'" "HN1'" H 0 0 N N N -2.259 7.814 63.630 -4.906 3.394 1.632 "HN1'" JSS 37 JSS H12 H12 H 0 1 N N N 2.130 -1.430 61.978 4.155 -1.316 1.291 H12 JSS 38 JSS H14 H14 H 0 1 N N N -0.912 -4.285 60.902 8.366 -1.260 0.595 H14 JSS 39 JSS H15 H15 H 0 1 N N N -2.529 -2.440 60.494 8.005 0.022 -1.476 H15 JSS 40 JSS H16 H16 H 0 1 N N N -1.791 -0.088 60.825 5.721 0.629 -2.166 H16 JSS 41 JSS "H2'" "H2'" H 0 1 N N N -3.057 5.163 63.513 -3.115 4.680 0.302 "H2'" JSS 42 JSS "H2'A" "H2'A" H 0 0 N N N -1.554 5.904 62.938 -2.584 3.574 1.606 "H2'A" JSS 43 JSS "H3'" "H3'" H 0 1 N N N -2.095 4.629 65.643 -2.474 3.194 -1.388 "H3'" JSS 44 JSS H3AA H3AA H 0 0 N N N 1.108 7.241 68.209 -1.640 -1.951 -1.356 H3AA JSS 45 JSS "H4'" "H4'" H 0 1 N N N -1.166 6.258 67.000 -3.664 1.225 -1.339 "H4'" JSS 46 JSS "H5'" "H5'" H 0 1 N N N -2.254 8.472 65.750 -3.987 1.254 1.664 "H5'" JSS 47 JSS "H5'A" "H5'A" H 0 0 N N N -3.340 7.144 66.213 -5.241 1.163 0.389 "H5'A" JSS 48 JSS H5A H5A H 0 1 N N N 0.418 11.346 69.158 -5.049 -4.280 -0.249 H5A JSS 49 JSS HN6A HN6A H 0 0 N N N -0.878 11.780 65.772 -6.419 -1.632 1.783 HN6A JSS 50 JSS HN6B HN6B H 0 0 N N N -1.331 12.218 67.278 -6.627 -3.201 1.220 HN6B JSS 51 JSS H7A H7A H 0 1 N N N 0.041 7.756 64.670 -1.962 0.406 1.063 H7A JSS 52 JSS H7AA H7AA H 0 0 N N N 0.911 6.633 65.769 -1.444 0.221 -0.629 H7AA JSS 53 JSS H8A H8A H 0 1 N N N 2.503 9.094 70.186 -2.133 -5.044 -1.121 H8A JSS 54 JSS H8AA H8AA H 0 0 N N N 0.958 9.603 70.948 -3.610 -4.987 -2.113 H8AA JSS 55 JSS H8AB H8AB H 0 0 N N N 1.196 7.892 70.456 -2.191 -4.018 -2.575 H8AB JSS 56 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal JSS O1 C1 SING N N 1 JSS C2 C1 SING N N 2 JSS C1 H1 SING N N 3 JSS C1 H1A SING N N 4 JSS O1 "C3'" SING N N 5 JSS N2 C2 SING N N 6 JSS C2 H2 SING N N 7 JSS C2 H2A SING N N 8 JSS C3 N2 SING N N 9 JSS N2 HN2 SING N N 10 JSS C4 C3 SING N N 11 JSS C3 H3 SING N N 12 JSS C3 H3A SING N N 13 JSS C11 C4 SING N N 14 JSS C4 H4 SING N N 15 JSS C4 H4A SING N N 16 JSS "C2'" "N1'" SING N N 17 JSS "N1'" "C5'" SING N N 18 JSS "N1'" "HN1'" SING N N 19 JSS C16 C11 DOUB Y N 20 JSS C11 C12 SING Y N 21 JSS C13 C12 DOUB Y N 22 JSS C12 H12 SING N N 23 JSS C14 C13 SING Y N 24 JSS C13 F13 SING N N 25 JSS C15 C14 DOUB Y N 26 JSS C14 H14 SING N N 27 JSS C15 C16 SING Y N 28 JSS C15 H15 SING N N 29 JSS C16 H16 SING N N 30 JSS N1A C2A DOUB Y N 31 JSS N1A C6A SING Y N 32 JSS "C2'" "C3'" SING N N 33 JSS "C2'" "H2'" SING N N 34 JSS "C2'" "H2'A" SING N N 35 JSS C7A C2A SING N N 36 JSS C2A C3A SING Y N 37 JSS "C3'" "C4'" SING N N 38 JSS "C3'" "H3'" SING N N 39 JSS C3A C4A DOUB Y N 40 JSS C3A H3AA SING N N 41 JSS "C5'" "C4'" SING N N 42 JSS C7A "C4'" SING N N 43 JSS "C4'" "H4'" SING N N 44 JSS C5A C4A SING Y N 45 JSS C4A C8A SING N N 46 JSS "C5'" "H5'" SING N N 47 JSS "C5'" "H5'A" SING N N 48 JSS C6A C5A DOUB Y N 49 JSS C5A H5A SING N N 50 JSS N6A C6A SING N N 51 JSS N6A HN6A SING N N 52 JSS N6A HN6B SING N N 53 JSS C7A H7A SING N N 54 JSS C7A H7AA SING N N 55 JSS C8A H8A SING N N 56 JSS C8A H8AA SING N N 57 JSS C8A H8AB SING N N 58 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor JSS SMILES ACDLabs 12.01 "Fc1cccc(c1)CCNCCOC2C(CNC2)Cc3nc(N)cc(c3)C" JSS SMILES_CANONICAL CACTVS 3.370 "Cc1cc(N)nc(C[C@H]2CNC[C@H]2OCCNCCc3cccc(F)c3)c1" JSS SMILES CACTVS 3.370 "Cc1cc(N)nc(C[CH]2CNC[CH]2OCCNCCc3cccc(F)c3)c1" JSS SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "Cc1cc(nc(c1)N)C[C@H]2CNC[C@H]2OCCNCCc3cccc(c3)F" JSS SMILES "OpenEye OEToolkits" 1.7.0 "Cc1cc(nc(c1)N)CC2CNCC2OCCNCCc3cccc(c3)F" JSS InChI InChI 1.03 "InChI=1S/C21H29FN4O/c1-15-9-19(26-21(23)10-15)12-17-13-25-14-20(17)27-8-7-24-6-5-16-3-2-4-18(22)11-16/h2-4,9-11,17,20,24-25H,5-8,12-14H2,1H3,(H2,23,26)/t17-,20+/m0/s1" JSS InChIKey InChI 1.03 NESZTSPBRDBHCW-FXAWDEMLSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier JSS "SYSTEMATIC NAME" ACDLabs 12.01 "6-{[(3S,4S)-4-(2-{[2-(3-fluorophenyl)ethyl]amino}ethoxy)pyrrolidin-3-yl]methyl}-4-methylpyridin-2-amine" JSS "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "6-[[(3S,4S)-4-[2-[2-(3-fluorophenyl)ethylamino]ethoxy]pyrrolidin-3-yl]methyl]-4-methyl-pyridin-2-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site JSS "Create component" 2010-06-23 RCSB JSS "Modify aromatic_flag" 2011-06-04 RCSB JSS "Modify descriptor" 2011-06-04 RCSB #