data_JSU # _chem_comp.id JSU _chem_comp.name "trichloro((3~{a}~{S},4~{S},6~{a}~{R})-4-[(5~{R})-5-oxidanyl-5-[2-(2,3,4,5-tetramethylcyclopenta-2,4-dien-1-ylidene)ethylamino]pentyl]-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-2-one)rhodium(3+)" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H32 Cl3 N3 O2 Rh S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge -1 _chem_comp.pdbx_initial_date 2022-08-26 _chem_comp.pdbx_modified_date 2024-02-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 599.827 _chem_comp.one_letter_code ? _chem_comp.three_letter_code JSU _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag Y _chem_comp.pdbx_model_coordinates_db_code 8GOG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal JSU CL1 CL1 CL -1 0 N N N N N N -37.808 -9.160 4.266 ? ? ? CL1 JSU 1 JSU RH RH1 RH 3 0 N N N N N N -36.022 -8.568 5.770 ? ? ? RH JSU 2 JSU C1 C1 C 0 1 N N N N N N -30.773 -15.651 14.036 ? ? ? C1 JSU 3 JSU N1 N1 N 0 1 N N N N N N -31.557 -15.249 14.898 ? ? ? N1 JSU 4 JSU O1 O1 O 0 1 N N N N N N -29.909 -16.492 14.248 ? ? ? O1 JSU 5 JSU S1 S1 S 0 1 N N N N N N -30.660 -12.090 13.929 ? ? ? S1 JSU 6 JSU C2 C2 C 0 1 N N R N N N -32.517 -14.055 14.277 ? ? ? C2 JSU 7 JSU N2 N2 N 0 1 N N N N N N -30.896 -14.984 12.883 ? ? ? N2 JSU 8 JSU O2 O2 O 0 1 N N N N N N -30.923 -10.089 7.344 ? ? ? O2 JSU 9 JSU C3 C3 C 0 1 N N N N N N -32.126 -12.585 14.812 ? ? ? C3 JSU 10 JSU N3 N3 N 0 1 N N N N N N -30.793 -8.036 8.459 ? ? ? N3 JSU 11 JSU C4 C4 C 0 1 N N S N N N -32.084 -13.984 12.809 ? ? ? C4 JSU 12 JSU C5 C5 C 0 1 N N S N N N -31.496 -12.669 12.429 ? ? ? C5 JSU 13 JSU C6 C6 C 0 1 N N N N N N -30.480 -12.824 11.283 ? ? ? C6 JSU 14 JSU C7 C7 C 0 1 N N N N N N -30.506 -11.524 10.533 ? ? ? C7 JSU 15 JSU C8 C8 C 0 1 N N N N N N -29.446 -11.463 9.480 ? ? ? C8 JSU 16 JSU C9 C9 C 0 1 N N N N N N -29.182 -9.914 9.090 ? ? ? C9 JSU 17 JSU C10 C10 C 0 1 N N N N N N -30.369 -9.336 8.241 ? ? ? C10 JSU 18 JSU C11 C11 C 0 1 N N N N N N -31.933 -7.631 7.521 ? ? ? C11 JSU 19 JSU C12 C12 C 0 1 N N N N N N -33.229 -8.432 7.455 ? ? ? C12 JSU 20 JSU C13 C13 C -1 1 N N N N N N -34.120 -7.863 6.370 ? ? ? C13 JSU 21 JSU C14 C14 C 0 1 N N N N N N -35.113 -6.882 6.575 ? ? ? C14 JSU 22 JSU C15 C15 C 0 1 N N N N N N -35.693 -6.544 5.330 ? ? ? C15 JSU 23 JSU C16 C16 C 0 1 N N N N N N -35.058 -7.320 4.346 ? ? ? C16 JSU 24 JSU C17 C17 C 0 1 N N N N N N -34.122 -8.152 4.990 ? ? ? C17 JSU 25 JSU C18 C18 C 0 1 N N N N N N -35.466 -6.274 7.900 ? ? ? C18 JSU 26 JSU C19 C19 C 0 1 N N N N N N -36.767 -5.514 5.112 ? ? ? C19 JSU 27 JSU C20 C20 C 0 1 N N N N N N -35.352 -7.321 2.874 ? ? ? C20 JSU 28 JSU C21 C21 C 0 1 N N N N N N -33.251 -9.151 4.288 ? ? ? C21 JSU 29 JSU H1 H1 H 0 1 N N N N N N -31.605 -15.594 15.835 ? ? ? H1 JSU 30 JSU H2 H2 H 0 1 N N N N N N -33.586 -14.279 14.411 ? ? ? H2 JSU 31 JSU H3 H3 H 0 1 N N N N N N -30.265 -15.120 12.119 ? ? ? H3 JSU 32 JSU H4 H4 H 0 1 N N N N N N -31.925 -12.616 15.893 ? ? ? H4 JSU 33 JSU H5 H5 H 0 1 N N N N N N -32.945 -11.879 14.612 ? ? ? H5 JSU 34 JSU H6 H6 H 0 1 N N N N N N -30.399 -7.430 9.151 ? ? ? H6 JSU 35 JSU H7 H7 H 0 1 N N N N N N -32.871 -14.323 12.120 ? ? ? H7 JSU 36 JSU H8 H8 H 0 1 N N N N N N -32.272 -11.933 12.172 ? ? ? H8 JSU 37 JSU H9 H9 H 0 1 N N N N N N -29.474 -13.013 11.686 ? ? ? H9 JSU 38 JSU H10 H10 H 0 1 N N N N N N -30.772 -13.653 10.622 ? ? ? H10 JSU 39 JSU H11 H11 H 0 1 N N N N N N -31.490 -11.410 10.054 ? ? ? H11 JSU 40 JSU H12 H12 H 0 1 N N N N N N -30.347 -10.700 11.245 ? ? ? H12 JSU 41 JSU H13 H13 H 0 1 N N N N N N -28.518 -11.910 9.865 ? ? ? H13 JSU 42 JSU H14 H14 H 0 1 N N N N N N -29.778 -12.016 8.589 ? ? ? H14 JSU 43 JSU H15 H15 H 0 1 N N N N N N -29.079 -9.324 10.012 ? ? ? H15 JSU 44 JSU H16 H16 H 0 1 N N N N N N -28.254 -9.844 8.504 ? ? ? H16 JSU 45 JSU H17 H17 H 0 1 N N N N N N -32.215 -6.605 7.800 ? ? ? H17 JSU 46 JSU H18 H18 H 0 1 N N N N N N -31.514 -7.633 6.504 ? ? ? H18 JSU 47 JSU H19 H19 H 0 1 N N N N N N -32.999 -9.483 7.227 ? ? ? H19 JSU 48 JSU H20 H20 H 0 1 N N N N N N -33.747 -8.372 8.424 ? ? ? H20 JSU 49 JSU H21 H21 H 0 1 N N N N N N -34.833 -5.393 8.080 ? ? ? H21 JSU 50 JSU H22 H22 H 0 1 N N N N N N -36.523 -5.970 7.894 ? ? ? H22 JSU 51 JSU H23 H23 H 0 1 N N N N N N -35.301 -7.013 8.698 ? ? ? H23 JSU 52 JSU H24 H24 H 0 1 N N N N N N -36.303 -4.540 4.899 ? ? ? H24 JSU 53 JSU H25 H25 H 0 1 N N N N N N -37.396 -5.815 4.261 ? ? ? H25 JSU 54 JSU H26 H26 H 0 1 N N N N N N -37.388 -5.434 6.017 ? ? ? H26 JSU 55 JSU H27 H27 H 0 1 N N N N N N -34.712 -6.581 2.371 ? ? ? H27 JSU 56 JSU H28 H28 H 0 1 N N N N N N -35.151 -8.320 2.461 ? ? ? H28 JSU 57 JSU H29 H29 H 0 1 N N N N N N -36.409 -7.063 2.711 ? ? ? H29 JSU 58 JSU H30 H30 H 0 1 N N N N N N -32.311 -8.668 3.982 ? ? ? H30 JSU 59 JSU H31 H31 H 0 1 N N N N N N -33.029 -9.986 4.969 ? ? ? H31 JSU 60 JSU H32 H32 H 0 1 N N N N N N -33.774 -9.532 3.398 ? ? ? H32 JSU 61 JSU CL2 CL2 CL -1 0 N N N N N N ? ? ? ? ? ? CL2 JSU 62 JSU CL3 CL3 CL -1 0 N N N N N N ? ? ? ? ? ? CL3 JSU 63 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal JSU RH C13 SING N N 1 JSU RH C14 SING N N 2 JSU RH C15 SING N N 3 JSU RH C16 SING N N 4 JSU RH C17 SING N N 5 JSU C1 N1 SING N N 6 JSU C1 O1 DOUB N N 7 JSU C1 N2 SING N N 8 JSU N1 C2 SING N N 9 JSU S1 C3 SING N N 10 JSU S1 C5 SING N N 11 JSU C2 C3 SING N N 12 JSU C2 C4 SING N N 13 JSU N2 C4 SING N N 14 JSU O2 C10 DOUB N N 15 JSU N3 C10 SING N N 16 JSU N3 C11 SING N N 17 JSU C4 C5 SING N N 18 JSU C5 C6 SING N N 19 JSU C6 C7 SING N N 20 JSU C7 C8 SING N N 21 JSU C8 C9 SING N N 22 JSU C9 C10 SING N N 23 JSU C11 C12 SING N N 24 JSU C12 C13 SING N N 25 JSU C13 C14 SING N N 26 JSU C13 C17 SING N N 27 JSU C14 C15 DOUB N N 28 JSU C14 C18 SING N N 29 JSU C15 C16 SING N N 30 JSU C15 C19 SING N N 31 JSU C16 C17 DOUB N N 32 JSU C16 C20 SING N N 33 JSU C17 C21 SING N N 34 JSU RH CL1 SING N N 35 JSU N1 H1 SING N N 36 JSU C2 H2 SING N N 37 JSU N2 H3 SING N N 38 JSU C3 H4 SING N N 39 JSU C3 H5 SING N N 40 JSU N3 H6 SING N N 41 JSU C4 H7 SING N N 42 JSU C5 H8 SING N N 43 JSU C6 H9 SING N N 44 JSU C6 H10 SING N N 45 JSU C7 H11 SING N N 46 JSU C7 H12 SING N N 47 JSU C8 H13 SING N N 48 JSU C8 H14 SING N N 49 JSU C9 H15 SING N N 50 JSU C9 H16 SING N N 51 JSU C11 H17 SING N N 52 JSU C11 H18 SING N N 53 JSU C12 H19 SING N N 54 JSU C12 H20 SING N N 55 JSU C18 H21 SING N N 56 JSU C18 H22 SING N N 57 JSU C18 H23 SING N N 58 JSU C19 H24 SING N N 59 JSU C19 H25 SING N N 60 JSU C19 H26 SING N N 61 JSU C20 H27 SING N N 62 JSU C20 H28 SING N N 63 JSU C20 H29 SING N N 64 JSU C21 H30 SING N N 65 JSU C21 H31 SING N N 66 JSU C21 H32 SING N N 67 JSU RH CL2 SING N N 68 JSU RH CL3 SING N N 69 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor JSU InChI InChI 1.06 "InChI=1S/C21H32N3O2S.3ClH.Rh/c1-12-13(2)15(4)16(14(12)3)9-10-22-19(25)8-6-5-7-18-20-17(11-27-18)23-21(26)24-20;;;;/h17-18,20H,5-11H2,1-4H3,(H,22,25)(H2,23,24,26);3*1H;/q-1;;;;+3/p-3/t17-,18-,20-;;;;/m0..../s1" JSU InChIKey InChI 1.06 VZIPCMCWYKDVTP-PCIMLXTCSA-K JSU SMILES_CANONICAL CACTVS 3.385 "[Cl-].[Cl-].[Cl-].[Rh+3].CC1=C(C)C(=C(C)[C-]1CCNC(=O)CCCC[C@@H]2SC[C@@H]3NC(=O)N[C@H]23)C" JSU SMILES CACTVS 3.385 "[Cl-].[Cl-].[Cl-].[Rh+3].CC1=C(C)C(=C(C)[C-]1CCNC(=O)CCCC[CH]2SC[CH]3NC(=O)N[CH]23)C" JSU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC12=C3([Rh+3]145([C-]2(C4(=C53C)C)CCNC(=O)CCCC[C@H]6[C@@H]7[C@H](CS6)NC(=O)N7)([Cl-])([Cl-])[Cl-])C" JSU SMILES "OpenEye OEToolkits" 2.0.7 "CC12=C3([Rh+3]145([C-]2(C4(=C53C)C)CCNC(=O)CCCCC6C7C(CS6)NC(=O)N7)([Cl-])([Cl-])[Cl-])C" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site JSU "Create component" 2022-08-26 PDBJ JSU "Modify aromatic_flag" 2022-09-06 PDBJ JSU "Modify charge" 2022-10-07 PDBJ JSU "Modify formal charge" 2022-10-07 PDBJ JSU "Modify linking type" 2022-10-11 PDBJ JSU "Modify formula" 2023-02-17 PDBJ JSU "Modify formula" 2023-03-01 PDBJ JSU "Initial release" 2024-02-28 RCSB #