data_JU9 # _chem_comp.id JU9 _chem_comp.name "[(~{E})-2-[4-methoxy-2-[(4-oxidanylidene-3,5-dihydropyrrolo[3,2-d]pyrimidin-7-yl)sulfanyl]phenyl]ethenyl]phosphonic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H14 N3 O5 P S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-05-09 _chem_comp.pdbx_modified_date 2023-05-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 379.328 _chem_comp.one_letter_code ? _chem_comp.three_letter_code JU9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7ZSM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal JU9 N1 N1 N 0 1 Y N N -17.437 -8.308 -53.872 -2.023 -1.323 -1.683 N1 JU9 1 JU9 N3 N2 N 0 1 N N N -14.746 -6.699 -55.500 -3.338 -1.112 1.568 N3 JU9 2 JU9 C4 C1 C 0 1 Y N N -18.552 -7.321 -60.453 3.253 0.093 -0.506 C4 JU9 3 JU9 C5 C2 C 0 1 Y N N -18.403 -6.427 -59.384 2.039 0.049 0.181 C5 JU9 4 JU9 C6 C3 C 0 1 N N N -18.889 -5.051 -59.482 1.206 1.262 0.293 C6 JU9 5 JU9 C7 C4 C 0 1 N N N -19.476 -4.464 -60.508 1.611 2.399 -0.259 C7 JU9 6 JU9 C8 C5 C 0 1 Y N N -17.779 -6.855 -58.208 1.613 -1.154 0.764 C8 JU9 7 JU9 C10 C6 C 0 1 Y N N -18.123 -7.569 -54.785 -0.847 -1.327 -0.987 C10 JU9 8 JU9 C13 C7 C 0 1 N N N -13.706 -7.158 -54.878 -4.630 -1.062 1.420 C13 JU9 9 JU9 C15 C8 C 0 1 Y N N -17.321 -8.163 -58.119 2.402 -2.290 0.653 C15 JU9 10 JU9 C1 C9 C 0 1 N N N -15.621 -10.425 -58.753 5.604 -3.220 -0.857 C1 JU9 11 JU9 O1 O1 O 0 1 N N N -17.007 -10.309 -59.061 4.376 -3.348 -0.138 O1 JU9 12 JU9 C2 C10 C 0 1 Y N N -17.488 -9.040 -59.175 3.605 -2.234 -0.031 C2 JU9 13 JU9 C3 C11 C 0 1 Y N N -18.089 -8.615 -60.350 4.028 -1.042 -0.609 C3 JU9 14 JU9 P1 P1 P 0 1 N N N -20.212 -2.916 -60.238 0.588 3.890 -0.121 P1 JU9 15 JU9 O2 O2 O 0 1 N N N -19.258 -2.014 -59.518 -0.745 3.551 0.716 O2 JU9 16 JU9 O3 O3 O 0 1 N N N -21.452 -3.095 -59.415 1.418 5.043 0.636 O3 JU9 17 JU9 O4 O4 O 0 1 N N N -20.592 -2.256 -61.523 0.214 4.359 -1.474 O4 JU9 18 JU9 S1 S1 S 0 1 N N N -17.573 -5.754 -56.831 0.082 -1.222 1.635 S1 JU9 19 JU9 C9 C12 C 0 1 Y N N -17.216 -6.851 -55.524 -1.110 -1.250 0.338 C9 JU9 20 JU9 C11 C13 C 0 1 Y N N -16.095 -8.080 -54.029 -3.066 -1.237 -0.791 C11 JU9 21 JU9 C12 C14 C 0 1 N N N -14.946 -8.579 -53.357 -4.469 -1.190 -0.924 C12 JU9 22 JU9 O5 O5 O 0 1 N N N -14.923 -9.391 -52.425 -4.993 -1.227 -2.025 O5 JU9 23 JU9 N2 N3 N 0 1 N N N -13.772 -8.045 -53.873 -5.219 -1.103 0.196 N2 JU9 24 JU9 C14 C15 C 0 1 Y N N -15.955 -7.162 -55.074 -2.516 -1.195 0.495 C14 JU9 25 JU9 H1 H1 H 0 1 N N N -17.846 -8.920 -53.195 -2.108 -1.370 -2.648 H1 JU9 26 JU9 H2 H2 H 0 1 N N N -19.033 -6.994 -61.363 3.583 1.016 -0.960 H2 JU9 27 JU9 H3 H3 H 0 1 N N N -18.750 -4.438 -58.604 0.267 1.225 0.825 H3 JU9 28 JU9 H4 H4 H 0 1 N N N -19.498 -4.931 -61.482 2.550 2.436 -0.791 H4 JU9 29 JU9 H5 H5 H 0 1 N N N -19.196 -7.550 -54.907 0.139 -1.382 -1.426 H5 JU9 30 JU9 H6 H6 H 0 1 N N N -12.732 -6.807 -55.185 -5.255 -0.997 2.299 H6 JU9 31 JU9 H7 H7 H 0 1 N N N -16.830 -8.498 -57.217 2.078 -3.218 1.101 H7 JU9 32 JU9 H8 H8 H 0 1 N N N -15.347 -11.488 -58.686 5.395 -2.909 -1.881 H8 JU9 33 JU9 H9 H9 H 0 1 N N N -15.028 -9.943 -59.544 6.234 -2.474 -0.372 H9 JU9 34 JU9 H10 H10 H 0 1 N N N -15.417 -9.933 -57.791 6.120 -4.180 -0.868 H10 JU9 35 JU9 H11 H11 H 0 1 N N N -18.194 -9.296 -61.182 4.967 -1.005 -1.141 H11 JU9 36 JU9 H12 H12 H 0 1 N N N -19.110 -1.231 -60.036 -0.575 3.237 1.615 H12 JU9 37 JU9 H13 H13 H 0 1 N N N -22.200 -2.751 -59.890 0.932 5.871 0.745 H13 JU9 38 JU9 H14 H14 H 0 1 N N N -12.910 -8.344 -53.464 -6.186 -1.070 0.126 H14 JU9 39 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal JU9 O4 P1 DOUB N N 1 JU9 C7 P1 SING N N 2 JU9 C7 C6 DOUB N E 3 JU9 C4 C3 DOUB Y N 4 JU9 C4 C5 SING Y N 5 JU9 C3 C2 SING Y N 6 JU9 P1 O2 SING N N 7 JU9 P1 O3 SING N N 8 JU9 C6 C5 SING N N 9 JU9 C5 C8 DOUB Y N 10 JU9 C2 O1 SING N N 11 JU9 C2 C15 DOUB Y N 12 JU9 O1 C1 SING N N 13 JU9 C8 C15 SING Y N 14 JU9 C8 S1 SING N N 15 JU9 S1 C9 SING N N 16 JU9 C9 C14 SING Y N 17 JU9 C9 C10 DOUB Y N 18 JU9 N3 C14 SING N N 19 JU9 N3 C13 DOUB N N 20 JU9 C14 C11 DOUB Y N 21 JU9 C13 N2 SING N N 22 JU9 C10 N1 SING Y N 23 JU9 C11 N1 SING Y N 24 JU9 C11 C12 SING N N 25 JU9 N2 C12 SING N N 26 JU9 C12 O5 DOUB N N 27 JU9 N1 H1 SING N N 28 JU9 C4 H2 SING N N 29 JU9 C6 H3 SING N N 30 JU9 C7 H4 SING N N 31 JU9 C10 H5 SING N N 32 JU9 C13 H6 SING N N 33 JU9 C15 H7 SING N N 34 JU9 C1 H8 SING N N 35 JU9 C1 H9 SING N N 36 JU9 C1 H10 SING N N 37 JU9 C3 H11 SING N N 38 JU9 O2 H12 SING N N 39 JU9 O3 H13 SING N N 40 JU9 N2 H14 SING N N 41 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor JU9 InChI InChI 1.06 "InChI=1S/C15H14N3O5PS/c1-23-10-3-2-9(4-5-24(20,21)22)11(6-10)25-12-7-16-14-13(12)17-8-18-15(14)19/h2-8,16H,1H3,(H,17,18,19)(H2,20,21,22)/b5-4+" JU9 InChIKey InChI 1.06 KJWNOOLCCNIVMI-SNAWJCMRSA-N JU9 SMILES_CANONICAL CACTVS 3.385 "COc1ccc(/C=C/[P](O)(O)=O)c(Sc2c[nH]c3C(=O)NC=Nc23)c1" JU9 SMILES CACTVS 3.385 "COc1ccc(C=C[P](O)(O)=O)c(Sc2c[nH]c3C(=O)NC=Nc23)c1" JU9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccc(c(c1)Sc2c[nH]c3c2N=CNC3=O)/C=C/P(=O)(O)O" JU9 SMILES "OpenEye OEToolkits" 2.0.7 "COc1ccc(c(c1)Sc2c[nH]c3c2N=CNC3=O)C=CP(=O)(O)O" # _pdbx_chem_comp_identifier.comp_id JU9 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(~{E})-2-[4-methoxy-2-[(4-oxidanylidene-3,5-dihydropyrrolo[3,2-d]pyrimidin-7-yl)sulfanyl]phenyl]ethenyl]phosphonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site JU9 "Create component" 2022-05-09 PDBE JU9 "Modify descriptor" 2022-08-22 RCSB JU9 "Initial release" 2023-05-17 RCSB #